BAC Information

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BAC

Clone NameB6Ng01-053P22
Chromosome8 (Build37)
Map Location 114,007,368 - 114,131,453
singlet/doubletdoublet
Overlap geneWdr59, Znrf1
Upstream geneHydin, Vac14, BC060632, 2010004A03Rik, Sf3b3, Cog4, Fuk, St3gal2, Ddx19a, Ddx19b, Aars, Exosc6, Mrcl, 4930402E16Rik, 9430091E24Rik, Glg1, Rfwd3, LOC547023, Mlkl, Fa2h
Downstream geneLdhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040, Cntnap4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053P22.bB6Ng01-053P22.g
ACCDH876872DH876873
length1,1561,122
definitionDH876872|Mus musculus domesticus DNA, BAC clone: B6Ng01-053P22, 5' end.DH876873|Mus musculus domesticus DNA, BAC clone: B6Ng01-053P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,007,368 - 114,008,529)(114,130,321 - 114,131,453)
sequence
gaattctgttttgtcttttgttctggaattaggcaatggtggaagctgca
caactccccaatcaaggcctttctgaaggctgaccaccattgttctcagc
agaccaccactgttctcagcagaccaccactgctctcagtagaccaccac
tgctctcagtagaccaccactgttctcagtagaccaccactgctctcacc
agatcaccactgctctcaactgggacaacagcagtgcaggctaagctgat
acagagaagccattaaagtagcctttaggtctgttgatttccattgtggc
caactagaaaaagcaactgaagtcaagttagtgaagagagctaaacctaa
aaacctcaactattcaactacatttaaatattcaaatattatgtcttccc
accaaacagctgctggcctttgaagtcattttgtaccttgtgtctcaatt
tcttcatctgtgaagcgtgataactctgcattacaaaacagctttaaaga
ctaaacaaatcacagcactgtagtacacattcctattgtgaatacctgag
ctcccaaagcccttcttggagtgatactcaggtctctgaaacaaagattc
ttgaagtctacacacacacacagacacagacacagacacacacacacaca
ctgttccacattgagagccaggccaatccaaggctttcagaggccccgct
gaaacaacaaaaagaaccaagttttatgttatgtccttgctcaggagcag
acttggcaaggtttagtctggggctgcggtctgggcatcaaacaagttaa
aggtttggttcctgggtacttggcttttccccttgaagagactggagtta
tcagtcccaaggccgctgtgctgagcatggggtatcacaagtacattgca
gaccaggctcccttcgtgcaacacagcagcttgattagcatctgtggact
ttgtcccattgtgtgacagccagtttctactgacttcatcccatgtctcc
cctggaaactgtatatgtgagatgcttgtatttcttagtaagtttgctag
cctaagaccatagctgtgcagacctctgatcccagttaacgtttcttatt
ttccaatcttctggcctcactcccctagattcgtcactggaagaaccaac
ctgctg
gaattcactgcatgcttgcaaagactgaatgagacgacatcatcacgagg
tctacagcagcgattgaggaggaaggatgagaactaaggagacgaactcg
cagaccaaggagggcacgggtactttccacactgccaatgtggaaacagg
tctctacttgcaatggtaacaggtaaacggtattttacacctacggagtc
atttctatagacagctgctgtcttccatggctgcttctttataacacggt
gtaaggactatcaagaggcaggcagtacactgactctacttcacagaaac
agtgaaaagcccaagtaacttgttcaacatgcactgcgccggaaagagac
agagctgacccccagccagcttgacctcgagccagctgctgctgtggcct
ctggctgacaagcgcaggagaaggggtcagcggcaagcacaacacagaca
caggtcttcaagtcacttccgactttctgccctgcccacacccacggttc
cagataatccctaaacatggatgacactttttctaggaatttgttactat
agaagatctgaatccagaatcagcacagtcctcttggcatggggcccaca
gcactgctatacgatgctggcttattacctttcaaacggaagtaaaggca
cagtgagagggacagaaaaactggagagctaaaggggaaaggctaatgtc
cccaccttctttcccgaaaggtcatccgatgagcaagacggactctacct
ctttaccgccccaatcttttcttgtatctttccagtcttgattcagcacc
aacagccctatggaatgacaaatactgatatttatgaactatctaaaggt
taaaacttgttgaaaatctttatcccatttgggaggaagtctgtactgaa
tggaactcgggcttgcacaccagaagtttgcagaggtggccaggtcatga
ctttctcagcctcctcagagcctcagcactgtcctcagcactgtcagtgg
cagctttattttcccaggtggtctcctcaggatgctcttgattctggagg
tgggggcagctggtgctcacagacttctcccctccctgtctcaactgtga
ctgccactagtaatacctgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_114007368_114008529
seq2: B6Ng01-053P22.b_47_1202

seq1  GAATTCTGTTTTGTCTTTTGTTCTGGAATTAGGCAATGGTGGAAGCTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTGTCTTTTGTTCTGGAATTAGGCAATGGTGGAAGCTGCA  50

seq1  CAACTCCCCAATCAAGGCCTTTCTGAAGGCTGACCACCATTGTTCTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCCCAATCAAGGCCTTTCTGAAGGCTGACCACCATTGTTCTCAGC  100

seq1  AGACCACCACTGTTCTCAGCAGACCACCACTGCTCTCAGTAGACCACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACCACTGTTCTCAGCAGACCACCACTGCTCTCAGTAGACCACCAC  150

seq1  TGCTCTCAGTAGACCACCACTGTTCTCAGTAGACCACCACTGCTCTCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCAGTAGACCACCACTGTTCTCAGTAGACCACCACTGCTCTCACC  200

seq1  AGATCACCACTGCTCTCAACTGGGACAACAGCAGTGCAGGCTAAGCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACCACTGCTCTCAACTGGGACAACAGCAGTGCAGGCTAAGCTGAT  250

seq1  ACAGAGAAGCCATTAAAGTAGCCTTTAGGTCTGTTGATTTCCATTGTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAGCCATTAAAGTAGCCTTTAGGTCTGTTGATTTCCATTGTGGC  300

seq1  CAACTAGAAAAAGCAACTGAAGTCAAGTTAGTGAAGAGAGCTAAACCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGAAAAAGCAACTGAAGTCAAGTTAGTGAAGAGAGCTAAACCTAA  350

seq1  AAACCTCAACTATTCAACTACATTTAAATATTCAAATATTATGTCTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCAACTATTCAACTACATTTAAATATTCAAATATTATGTCTTCCC  400

seq1  ACCAAACAGCTGCTGGCCTTTGAAGTCATTTTGTACCTTGTGTCTCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACAGCTGCTGGCCTTTGAAGTCATTTTGTACCTTGTGTCTCAATT  450

seq1  TCTTCATCTGTGAAGCGTGATAACTCTGCATTACAAAACAGCTTTAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATCTGTGAAGCGTGATAACTCTGCATTACAAAACAGCTTTAAAGA  500

seq1  CTAAACAAATCACAGCACTGTAGTACACATTCCTATTGTGAATACCTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAATCACAGCACTGTAGTACACATTCCTATTGTGAATACCTGAG  550

seq1  CTCCCAAAGCCCTTCTTGGAGTGATACTCAGGTCTCTGAAACAAAGATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAAGCCCTTCTTGGAGTGATACTCAGGTCTCTGAAACAAAGATTC  600

seq1  TTGAAGTCTACACACACACACAGACACAGACACAGACACACACACACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTCTACACACACACACAGACACAGACACAGACACACACACACACA  650

seq1  CTGTTCCACATTGAGAGCCAGGCCAATCCAAGGCTTTCAGAGGCCCCGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCACATTGAGAGCCAGGCCAATCCAAGGCTTTCAGAGGCCCCGCT  700

seq1  GAAACAACAAAAAGAACCAAGTTTTATGTTATGTCCTTGCTCAGGAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAACAAAAAGAACCAAGTTTTATGTTATGTCCTTGCTCAGGAGCAG  750

seq1  ACTTGGCAAGGTTTAGTCTGGGGCTGCGGTCTGGGCATCAAACAAGTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCAAGGTTTAGTCTGGGGCTGCGGTCTGGGCATCAAACAAGTTAA  800

seq1  GGTTTTGGTTCCTGGGTACTTGGCTTTTCCCCTTGAAGAGACTGGAGTTA  850
       | |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGGTTCCTGGGTACTTGGCTTTTCCCCTTGAAGAGACTGGAGTTA  850

seq1  TCAGTCCCAAGGCCGCTGTGCTGAGCATGGGGTATCACAAGTACATTGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCCAAGGCCGCTGTGCTGAGCATGGGGTATCACAAGTACATTGCA  900

seq1  GACCAGGCTCCCTTCGTGCAACACAGCAGCTTGATTAGCATCTTGTGGAC  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GACCAGGCTCCCTTCGTGCAACACAGCAGCTTGATTAGCATC-TGTGGAC  949

seq1  TTTGTCCCATTGTGTGACAGCCAGTTTCTACTGACTTCATCCCATGTCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCCATTGTGTGACAGCCAGTTTCTACTGACTTCATCCCATGTCTC  999

seq1  CCCTGGAAACTGTATATGTGAGATGC-TGTATTTCTTAGTAAGTTTGCTT  1049
      |||||||||||||||||||||||||| ||||||||||||||||||||| |
seq2  CCCTGGAAACTGTATATGTGAGATGCTTGTATTTCTTAGTAAGTTTGC-T  1048

seq1  AGCCTAAGA-CATAGCTTGTGCAAGACCTCCTGATCCCAGGTTAACGTTT  1098
      ||||||||| |||||| ||||| |||||| ||||||||| ||||||||||
seq2  AGCCTAAGACCATAGC-TGTGC-AGACCT-CTGATCCCA-GTTAACGTTT  1094

seq1  TCTTTATTGTCTCATCTTCTGGCCTCACTCTCCTTAGATTCTGTCACT-G  1147
         ||||| ||  ||||||||||||||||| || ||||||| |||||| |
seq2  --CTTATTTTCCAATCTTCTGGCCTCACTC-CCCTAGATTC-GTCACTGG  1140

seq1  AAGAA-CAACCTGCTG  1162
      ||||| ||||||||||
seq2  AAGAACCAACCTGCTG  1156

seq1: chr8_114130321_114131453
seq2: B6Ng01-053P22.g_68_1189 (reverse)

seq1  CAGCAGGTTATAACTAGTGGCAGTCACAAGTGTTGAGGACAGGAGTGGGA  50
      ||||||| ||| ||||||||||||||||   ||||| ||||||   ||||
seq2  CAGCAGG-TATTACTAGTGGCAGTCACA---GTTGA-GACAGGGAGGGGA  45

seq1  GAAGTTCTGTGAGCACAGGCTGCCCCCACCTCCAGAATCAAGGAGCATCT  100
      |||| |||||||||||  ||||||||||||||||||||||| ||||||| 
seq2  GAAG-TCTGTGAGCACCAGCTGCCCCCACCTCCAGAATCAA-GAGCATCC  93

seq1  TGAAGAGACCACCTGGGAAAATAAAGCTGCCACTGGAACAGTGCTGAGGA  150
      ||| |||||||||||||||||||||||||||||||  |||||||||||||
seq2  TGAGGAGACCACCTGGGAAAATAAAGCTGCCACTG--ACAGTGCTGAGGA  141

seq1  CAGTGCTGAGGCTCTGAGGAGGCCTGAGAAAGTCATGGCCTGGCCACCTC  200
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  CAGTGCTGAGGCTCTGAGGAGG-CTGAGAAAGTCATGACCTGGCCACCTC  190

seq1  TGCAGACTTCTGGTGTGCAAGGCCGAGTTCCATTCAGTACAGACTTCCTT  250
      |||| |||||||||||||||| |||||||||||||||||||||||||| |
seq2  TGCAAACTTCTGGTGTGCAAGCCCGAGTTCCATTCAGTACAGACTTCC-T  239

seq1  CCAAAATGGGATAAAGATTTTCAACAAGTTTTAACCTTTAGATAGTTCAT  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATGGGATAAAGATTTTCAACAAGTTTTAACCTTTAGATAGTTCAT  289

seq1  AAATATCAGTATTTGTCATTCCATAGGGCTGTTGGTGCTGAATCAAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAGTATTTGTCATTCCATAGGGCTGTTGGTGCTGAATCAAGACT  339

seq1  GGAAAGATACAAGAAAAGATTGGGGCGGTAAAGAGGTAGAGTCCGTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGATACAAGAAAAGATTGGGGCGGTAAAGAGGTAGAGTCCGTCTTG  389

seq1  CTCATCGGATGACCTTTCGGGAAAGAAGGTGGGGACATTAGCCTTTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCGGATGACCTTTCGGGAAAGAAGGTGGGGACATTAGCCTTTCCCC  439

seq1  TTTAGCTCTCCAGTTTTTCTGTCCCGCTCACTGTGCCTTTACTTCCGTTT  500
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTAGCTCTCCAGTTTTTCTGTCCCTCTCACTGTGCCTTTACTTCCGTTT  489

seq1  GAAAGGTAATAAGCCAGCATCGTATAGCAGTGCTGTGGGCCCCATGCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTAATAAGCCAGCATCGTATAGCAGTGCTGTGGGCCCCATGCCAA  539

seq1  GAGGACTGTGCTGATTCTGGATTCAGATCTTCTATAGTAACAAATTCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTGTGCTGATTCTGGATTCAGATCTTCTATAGTAACAAATTCCTA  589

seq1  GAAAAAGTGTCATCCATGTTTAGGGATTATCTGGAACCGTGGGTGTGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGTGTCATCCATGTTTAGGGATTATCTGGAACCGTGGGTGTGGGC  639

seq1  AGGGCAGAAAGTCGGAAGTGACTTGAAGACCTGTGTCTGTGTTGTGCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGAAAGTCGGAAGTGACTTGAAGACCTGTGTCTGTGTTGTGCTTG  689

seq1  CCGCTGACCCCTTCTCCTGCGCTTGTCAGCCAGAGGCCACAGCAGCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGACCCCTTCTCCTGCGCTTGTCAGCCAGAGGCCACAGCAGCAGCT  739

seq1  GGCTCGAGGTCAAGCTGGCTGGGGGTCAGCTCTGTCTCTTTCCGGCGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGAGGTCAAGCTGGCTGGGGGTCAGCTCTGTCTCTTTCCGGCGCAG  789

seq1  TGCATGTTGAACAAGTTACTTGGGCTTTTCACTGTTTCTGTGAAGTAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTTGAACAAGTTACTTGGGCTTTTCACTGTTTCTGTGAAGTAGAG  839

seq1  TCAGTGTACTGCCTGCCTCTTGATAGTCCTTACACCGTGTTATAAAGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTACTGCCTGCCTCTTGATAGTCCTTACACCGTGTTATAAAGAAG  889

seq1  CAGCCATGGAAGACAGCAGCTGTCTATAGAAATGACTCCGTAGGTGTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGGAAGACAGCAGCTGTCTATAGAAATGACTCCGTAGGTGTAAA  939

seq1  ATACCGTTTACCTGTTACCATTGCAAGTAGAGACCTGTTTCCACATTGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCGTTTACCTGTTACCATTGCAAGTAGAGACCTGTTTCCACATTGGC  989

seq1  AGTGTGGAAAGTACCCGTGCCCTCCTTGGTCTGCGAGTTCGTCTCCTTAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGAAAGTACCCGTGCCCTCCTTGGTCTGCGAGTTCGTCTCCTTAG  1039

seq1  TTCTCATCCTTCCTCCTCAATCGCTGCTGTAGACCTCGTGATGATGTCGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATCCTTCCTCCTCAATCGCTGCTGTAGACCTCGTGATGATGTCGT  1089

seq1  CTCATTCAGTCTTTGCAAGCATGCAGTGAATTC  1133
      |||||||||||||||||||||||||||||||||
seq2  CTCATTCAGTCTTTGCAAGCATGCAGTGAATTC  1122