BAC Information

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BAC

Clone NameB6Ng01-055B23
Chromosome8 (Build37)
Map Location 8,657,656 - 8,809,416
singlet/doubletdoublet
Overlap geneEfnb2, 9430010O03Rik
Upstream geneLOC100039836
Downstream geneTmem28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055B23.bB6Ng01-055B23.g
ACCDH877674DH877675
length1,1881,136
definitionDH877674|Mus musculus domesticus DNA, BAC clone: B6Ng01-055B23, 5' end.DH877675|Mus musculus domesticus DNA, BAC clone: B6Ng01-055B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,808,212 - 8,809,416)(8,657,656 - 8,658,805)
sequence
gaattcatgaagaactgtttttccagtgatgccacactggcctgagaaaa
aacctacgtggaagcttccggtaaccacggcgaacccaacagtgagaaca
tcgtgttattgtcatcagttccttctccattcagggttgtttcagagaat
cccctctagccacctcggacctgtccatactgtagcgggttccaccctca
cgctgagaatcaaagtgacaatggggaagaagaagcgggactgtttgtca
caattgaatccttccttttctttctttctttctttctttctttctttctt
tctttctttctttctttctttcttccttccttccttccttccttccttcc
ttccttctttccctccttccttccttttgttctctctctctgtctctctc
tctctctctctctctccagattttattcccctcccggtctgccctcctac
tgtttcacatcccatacctcctccccctctccctgccccgagtccacaca
cacacacacccacccaaatcccaccagaactctaaactccctggggcctc
cagtctcttgagggttaggtgcatcttctctgactgaacccagacccggc
agtcctctgctgtatgtgtattgggggtttcatatcagctggtgtatgct
gcctggttggtggtccagtatctgagagatcttggggatccaggttgaga
ctgctaatcctacagagtcaccctcggaaggtttcagggtgaaaccttcc
ttttgttctcacctagactgcttagaaggcgtgaagccacagatccttct
gtcccttggcttctcattcccttggcttctcattctgtccatcagtagtc
caccactgccaccctcccttgagctctgagggcatagccttgggtgtctt
tgtgactgggtgagtgacttgtggacaccagcaggctgtaccgtgtctga
attggtcctgcatgctctccttggcgcttcgatacccgctggagcatgca
accatcagcgctattggatttctcatcttccgacctggggtagacctggt
tctgtcccgtacctttccagaagacttgggtgaatatggtgttcatctat
caatggcgactggccaagcccttgggtggcctcagtgatctagatactcc
gcattcaggaaagagcctcagagaaaccaaggcctctg

gaattcagtattatgtgtggaaaaacattgcatgggaaaagcacagtgct
ctgtaaattaactagtatgtatgtgtgacttatagaattaaaaaaaaaaa
ccagacataaattaatactggaaggaaatattcaagggtgtaatttcttt
tagaatcctctgccagtgtagagttgctaagcccaagtgaaactactacc
catcaaaaccacaacaagcaggcaccgctttattccggctaagacactac
agtggggagggggttctactgaaatgttaattagaaatggttgccaggct
ttgcaactctttccagaacttaaaaatagttgaaaagtgacctaaacagc
gcccacatcttcagatacaatgtgactaatctgacagggcagccacataa
tctttgagtacacagaacttctgattattacataaactctccaggatggg
atggcaggcaatgtgattaaagtagttatggagactccagtttacaaagg
attctctgggctctacaagcaagcagctgctgcatgctccctgtgtcgac
cacctgctaaaaaggctgaccccagaatgaaacaaatctaattaccaatg
cctgtttcatgacaagtgacttgttcatgcaaagtaaggtaaagcttcca
agcgtctggctacctacctgccacattttacctacagaaacttttctctg
aaaaagtgaacaagggaggcgatgccaggcactaaaaactaaaaggctct
tttgtgttactcttccgaggaagaagtctttctgatctcacagacagcat
tcagccacaggctttccaaagacttccagccatcctcaagaaaattctaa
gacattttattgtggaggccagggagtaatcacacaactgcacggtacag
ggaggcctgctctccaaaacccagggccctagcagctctctatacatctg
tggccacagctcggaaactatcctgttgaagatcaaatcctccttaacat
aacaagtttcaaatcaggacatgattcttcagtgctacgtggcactgggt
ggcagtgctgttaaccaatccggatttctaatctcgctgcacacccaagt
atgggtcacattgaacagaaagatgttatgttactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_8808212_8809416
seq2: B6Ng01-055B23.b_47_1234 (reverse)

seq1  CAGAGGCACCTTGGTTTTCATTGAGGCCTTCTCCTGAAGTCGGAGTAACT  50
      ||||||  |||||| ||||  ||||||  | |||||||  ||||||| ||
seq2  CAGAGG--CCTTGG-TTTCTCTGAGGCTCTTTCCTGAATGCGGAGTATCT  47

seq1  AGGATTACATGATGACACCACAAGGCTAGGCAAGTCGACCATTGAATAGA  100
      | ||| || ||| | ||||  | |||| ||| ||||| |||||| |||||
seq2  A-GATCAC-TGAGGCCACCCAAGGGCTTGGCCAGTCG-CCATTG-ATAGA  93

seq1  TGGAAACACATAGTCACCCAGGTCTTCTAGAAAGGTACGGGGACAG-ACC  149
      || | || |||| ||||||| ||||||| ||||||||| ||||||| |||
seq2  TGAACAC-CATATTCACCCAAGTCTTCTGGAAAGGTAC-GGGACAGAACC  141

seq1  AGGTCTAACACCAGGGTCGGAAGGATGAGAGATCCAATATGCGCTGATGG  199
      |||||| || ||| |||||||| ||||||| |||||||| ||||||||||
seq2  AGGTCT-ACCCCA-GGTCGGAA-GATGAGAAATCCAATA-GCGCTGATGG  187

seq1  TGGCATTGCTCCAGCGTGTATCGAAGGCGCCCAAGGAGAAGCATGCAGGA  249
      | ||| |||||||||| |||||||| ||| |||||||| |||||||||||
seq2  TTGCA-TGCTCCAGCGGGTATCGAA-GCG-CCAAGGAG-AGCATGCAGGA  233

seq1  CCAATTCAGACACGGTACAGCCCTGCTGGTGTCCACAAGTCACTCACCCA  299
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCAATTCAGACACGGTACAG-CCTGCTGGTGTCCACAAGTCACTCACCCA  282

seq1  GTCACAAAGACACCCAAGGCTATGCCCTCAGAGCTCAAGGGAGGGTGGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAAGACACCCAAGGCTATGCCCTCAGAGCTCAAGGGAGGGTGGCA  332

seq1  GTGGTGGACTACTGATGGACAGAATGAGAAGCCAAGGGAATGAGAAGCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGACTACTGATGGACAGAATGAGAAGCCAAGGGAATGAGAAGCCA  382

seq1  AGGGACAGAAGGATCTGTGGCTTCACGCCTTCTAAGCAGTCTAGGTGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGAAGGATCTGTGGCTTCACGCCTTCTAAGCAGTCTAGGTGAGA  432

seq1  ACAAAAGGAAGGTTTCACCCTGAAACCTTCCGAGGGTGACTCTGTAGGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGGAAGGTTTCACCCTGAAACCTTCCGAGGGTGACTCTGTAGGAT  482

seq1  TAGCAGTCTCAACCTGGATCCCCAAGATCTCTCAGATACTGGACCACCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTCTCAACCTGGATCCCCAAGATCTCTCAGATACTGGACCACCAA  532

seq1  CCAGGCAGCATACACCAGCTGATATGAAACCCCCAATACACATACAGCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAGCATACACCAGCTGATATGAAACCCCCAATACACATACAGCAG  582

seq1  AGGACTGCCGGGTCTGGGTTCAGTCAGAGAAGATGCACCTAACCCTCAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGCCGGGTCTGGGTTCAGTCAGAGAAGATGCACCTAACCCTCAAG  632

seq1  AGACTGGAGGCCCCAGGGAGTTTAGAGTTCTGGTGGGATTTGGGTGGGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGAGGCCCCAGGGAGTTTAGAGTTCTGGTGGGATTTGGGTGGGTG  682

seq1  TGTGTGTGTGTGGACTCGGGGCAGGGAGAGGGGGAGGAGGTATGGGATGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGGACTCGGGGCAGGGAGAGGGGGAGGAGGTATGGGATGT  732

seq1  GAAACAGTAGGAGGGCAGACCGGGAGGGGAATAAAATCTGGAGAGAGAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGTAGGAGGGCAGACCGGGAGGGGAATAAAATCTGGAGAGAGAGA  782

seq1  GAGAGAGAGAGAGACAGAGAGAGAGAACAAAAGGAAGGAAGGAGGGAAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGACAGAGAGAGAGAACAAAAGGAAGGAAGGAGGGAAAG  832

seq1  AAGGAAGGAAGGAAGTAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAA  899
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAA  882

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAGGATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAGGATT  932

seq1  CAATTGTGACAAACAGTCCCGCTTCTTCTTCCCCATTGTCACTTTGATTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTGACAAACAGTCCCGCTTCTTCTTCCCCATTGTCACTTTGATTC  982

seq1  TCAGCGTGAGGGTGGAACCCGCTACAGTATGGACAGGTCCGAGGTGGCTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCGTGAGGGTGGAACCCGCTACAGTATGGACAGGTCCGAGGTGGCTA  1032

seq1  GAGGGGATTCTCTGAAACAACCCTGAATGGAGAAGGAACTGATGACAATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGATTCTCTGAAACAACCCTGAATGGAGAAGGAACTGATGACAATA  1082

seq1  ACACGATGTTCTCACTGTTGGGTTCGCCGTGGTTACCGGAAGCTTCCACG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGATGTTCTCACTGTTGGGTTCGCCGTGGTTACCGGAAGCTTCCACG  1132

seq1  TAGGTTTTTTCTCAGGCCAGTGTGGCATCACTGGAAAAACAGTTCTTCAT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTTTCTCAGGCCAGTGTGGCATCACTGGAAAAACAGTTCTTCAT  1182

seq1  GAATTC  1205
      ||||||
seq2  GAATTC  1188


seq1: chr8_8657656_8658805
seq2: B6Ng01-055B23.g_66_1201

seq1  GAATTCAGTATTATGTGTGGAAAAACATTGCATGGGAAAAGCACAGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATTATGTGTGGAAAAACATTGCATGGGAAAAGCACAGTGCT  50

seq1  CTGTAAATTAACTAGTATGTATGTGTGACTTATAGAATTAAAAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAATTAACTAGTATGTATGTGTGACTTATAGAATTAAAAAAAAAAA  100

seq1  CCAGACATAAATTAATACTGGAAGGAAATATTCAAGGGTGTAATTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATAAATTAATACTGGAAGGAAATATTCAAGGGTGTAATTTCTTT  150

seq1  TAGAATCCTCTGCCAGTGTAGAGTTGCTAAGCCCAAGTGAAACTACTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCCTCTGCCAGTGTAGAGTTGCTAAGCCCAAGTGAAACTACTACC  200

seq1  CATCAAAACCACAACAAGCAGGCACCGCTTTATTCCGGCTAAGACACTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAACCACAACAAGCAGGCACCGCTTTATTCCGGCTAAGACACTAC  250

seq1  AGTGGGGAGGGGGTTCTACTGAAATGTTAATTAGAAATGGTTGCCAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGAGGGGGTTCTACTGAAATGTTAATTAGAAATGGTTGCCAGGCT  300

seq1  TTGCAACTCTTTCCAGAACTTAAAAATAGTTGAAAAGTGACCTAAACAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACTCTTTCCAGAACTTAAAAATAGTTGAAAAGTGACCTAAACAGC  350

seq1  GCCCACATCTTCAGATACAATGTGACTAATCTGACAGGGCAGCCACATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACATCTTCAGATACAATGTGACTAATCTGACAGGGCAGCCACATAA  400

seq1  TCTTTGAGTACACAGAACTTCTGATTATTACATAAACTCTCCAGGATGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGTACACAGAACTTCTGATTATTACATAAACTCTCCAGGATGGG  450

seq1  ATGGCAGGCAATGTGATTAAAGTAGTTATGGAGACTCCAGTTTACAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGGCAATGTGATTAAAGTAGTTATGGAGACTCCAGTTTACAAAGG  500

seq1  ATTCTCTGGGCTCTACAAGCAAGCAGCTGCTGCATGCTCCCTGTGTCGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGGGCTCTACAAGCAAGCAGCTGCTGCATGCTCCCTGTGTCGAC  550

seq1  CACCTGCTAAAAAGGCTGACCCCAGAATGAAACAAATCTAATTACCAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCTAAAAAGGCTGACCCCAGAATGAAACAAATCTAATTACCAATG  600

seq1  CCTGTTTCATGACAAGTGACTTGTTCATGCAAAGTAAGGTAAAGCTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTCATGACAAGTGACTTGTTCATGCAAAGTAAGGTAAAGCTTCCA  650

seq1  AGCGTCTGGCTACCTACCTGCCACATTTTACCTACAGAAACTTTTCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTCTGGCTACCTACCTGCCACATTTTACCTACAGAAACTTTTCTCTG  700

seq1  AAAAAGTGAACAAGGGAGGCGATGCCAGGCACTAAAAACTAAAAGGCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGAACAAGGGAGGCGATGCCAGGCACTAAAAACTAAAAGGCTCT  750

seq1  TTTGTGTTACTCTTCCGAGGAAGAAGTCTTTCTGATCTCACAGACAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTACTCTTCCGAGGAAGAAGTCTTTCTGATCTCACAGACAGCAT  800

seq1  TCAGCCACAGGCTTTCCAAAGACTTCCAGCCATCCTCAAGAAAATTCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCACAGGCTTTCCAAAGACTTCCAGCCATCCTCAAGAAAATTCTAA  850

seq1  GACATTTTATTGTGGAGGCCAGGGAGTAATCACACAACTGCACGGTACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTATTGTGGAGGCCAGGGAGTAATCACACAACTGCACGGTACAG  900

seq1  GGAGGCCTGCTCCTCCAAAACCCAGGGCCCTAGCAGCTCTCTATACATCT  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCTGCT-CTCCAAAACCCAGGGCCCTAGCAGCTCTCTATACATCT  949

seq1  GTGGCCACAGCTCGGAAAACTATCCTGTTGAAGATCAAATCCCTCCCTAA  1000
      ||||||||||||||| |||||||||||||||||||||||| ||||| |||
seq2  GTGGCCACAGCTCGG-AAACTATCCTGTTGAAGATCAAAT-CCTCCTTAA  997

seq1  CATAACAGGTTTCAAATCAAAGACATGATTCTCCAAGTGCTACGT-GCAC  1049
      ||||||| |||||||||| | ||||||||||| | |||||||||| ||||
seq2  CATAACAAGTTTCAAATC-AGGACATGATTCTTC-AGTGCTACGTGGCAC  1045

seq1  TTGGTGGCAGTGCTGTTTAAACAAATCAGTATTTCTAATCCTTCCGTCTG  1099
      | |||||||||||||||  ||| |||| | ||||||||||  ||   |||
seq2  TGGGTGGCAGTGCTGTT--AACCAATCCGGATTTCTAATC--TC--GCTG  1089

seq1  CACACCCAAGTATAGTGGTCACTATGAACAGAAAAGATGGTTATGTTACT  1149
      |||||||||||||   ||||||  ||||||| |||||| |||||||||||
seq2  CACACCCAAGTAT--GGGTCACATTGAACAG-AAAGAT-GTTATGTTACT  1135

seq1  C  1150
      |
seq2  C  1136


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