BAC Information

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BAC

Clone NameB6Ng01-055I21
Chromosome8 (Build37)
Map Location 27,944,788 - 28,075,410
singlet/doubletdoublet
Overlap genenone
Upstream geneAsh2l, Kcnu1, Hgsnat, 4930444A02Rik, Fnta, Hook3, 1700047A11Rik, Rnf170, Thap1
Downstream geneZfp703, Erlin2, Prosc, Gpr124, Brf2, Rab11fip1, Got1l1, Adrb3, Eif4ebp1, LOC732482, Tex24, Chrnb3, Chrna6, 4921537P18Rik, Gm1698
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055I21.bB6Ng01-055I21.g
ACCDH877968DH877969
length613780
definitionDH877968|Mus musculus domesticus DNA, BAC clone: B6Ng01-055I21, 5' end.DH877969|Mus musculus domesticus DNA, BAC clone: B6Ng01-055I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,074,798 - 28,075,410)(27,944,788 - 27,945,564)
sequence
gaattctttggggggcaaaaaaagcccttttctctgtcgttggttaataa
aggactctaattgggtcacatatgcatggcggtctacaaaattatcatct
ggactataataacaggaagagaagttgaaaaaaaaaacaacaacaaaaac
ttgtccactttgaaatgcccccatcttatctggacagacccaaacaaatt
caccacgactctccagtgtatccacacaaacatttgacttgagagacaaa
tggactttcagcattttatcaggacactcaccacccagggctctcagtgg
taggaggagggaccccaagggtgttctgtggccacggagacaggctaggc
cattcctcaggggtgcatccatgtatgctccaccttcctgagtggcactg
tgggcatggttccatctcttcccttgatgcatgtcatctttaaaaagctg
atcttaatctttatatttatttatatccctcctacctccataaaagattt
gaggtggcttacaattcaaaatgcagatactgtaaaatctgaagccatta
acagaaaggtaaaaagatcagacagagccaagtacaaagaaggaggggga
gggagaaggagag
gaattcaaagatgccctggactatagaacacgttcaaggacagcttgaga
taaaataggaagatgctatctccaaaaatgcaaaaggaaggaaggaagga
aggaaggaaggaaggaaggggaaagaggaagggaaggtgaaaggagacag
aaagaaggaagagggaacaaggaagggatgatataaaagcaggacgtggc
cctttcttttctccccacatctgcctatgaaccagagggatgaagagctg
accctggcttctcactctactgatgtattgagactgcctctcgccttgtc
tacgatactgttatgcttttcttacaacaaacaattggcagaaatgaaac
aaaacaaaacaaaacaaaaaaaaacccaggctgcagaacgcagcccttct
tcctcgtactcatctacgtacatctatgtattttttaaacttgtttttca
tctcagtggttctaaggcgtgcaggcgtgataaaacacagatggagagga
gcagacaacgatgccatgctcgcagaagacatcgcaccacgttgtatgct
ttcagaaatcttggaagacctcaggatgcaaaagtaggatttttcttttc
cctctttgggtctttcccctccttccctcttcgtgtatttggaattatct
ctttgtctctttctgcggctgtgtggcccttagatcacctgctgctgtta
ggagcactgttgctctgcctgggtcactggggcactgcgatgccctgggc
ttgacccccacctcaacctgagcctgtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_28074798_28075410
seq2: B6Ng01-055I21.b_45_657 (reverse)

seq1  CTCTCCTTCTCCCTCCCCCTCCTTCTTTGTACTTGGCTCTGTCTGATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTCTCCCTCCCCCTCCTTCTTTGTACTTGGCTCTGTCTGATCTT  50

seq1  TTTACCTTTCTGTTAATGGCTTCAGATTTTACAGTATCTGCATTTTGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTTTCTGTTAATGGCTTCAGATTTTACAGTATCTGCATTTTGAAT  100

seq1  TGTAAGCCACCTCAAATCTTTTATGGAGGTAGGAGGGATATAAATAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCCACCTCAAATCTTTTATGGAGGTAGGAGGGATATAAATAAATA  150

seq1  TAAAGATTAAGATCAGCTTTTTAAAGATGACATGCATCAAGGGAAGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATTAAGATCAGCTTTTTAAAGATGACATGCATCAAGGGAAGAGAT  200

seq1  GGAACCATGCCCACAGTGCCACTCAGGAAGGTGGAGCATACATGGATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCATGCCCACAGTGCCACTCAGGAAGGTGGAGCATACATGGATGCA  250

seq1  CCCCTGAGGAATGGCCTAGCCTGTCTCCGTGGCCACAGAACACCCTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAGGAATGGCCTAGCCTGTCTCCGTGGCCACAGAACACCCTTGGG  300

seq1  GTCCCTCCTCCTACCACTGAGAGCCCTGGGTGGTGAGTGTCCTGATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCCTCCTACCACTGAGAGCCCTGGGTGGTGAGTGTCCTGATAAAA  350

seq1  TGCTGAAAGTCCATTTGTCTCTCAAGTCAAATGTTTGTGTGGATACACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAGTCCATTTGTCTCTCAAGTCAAATGTTTGTGTGGATACACTG  400

seq1  GAGAGTCGTGGTGAATTTGTTTGGGTCTGTCCAGATAAGATGGGGGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCGTGGTGAATTTGTTTGGGTCTGTCCAGATAAGATGGGGGCATT  450

seq1  TCAAAGTGGACAAGTTTTTGTTGTTGTTTTTTTTTTCAACTTCTCTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTGGACAAGTTTTTGTTGTTGTTTTTTTTTTCAACTTCTCTTCCT  500

seq1  GTTATTATAGTCCAGATGATAATTTTGTAGACCGCCATGCATATGTGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTATAGTCCAGATGATAATTTTGTAGACCGCCATGCATATGTGACC  550

seq1  CAATTAGAGTCCTTTATTAACCAACGACAGAGAAAAGGGCTTTTTTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGAGTCCTTTATTAACCAACGACAGAGAAAAGGGCTTTTTTTGCC  600

seq1  CCCCAAAGAATTC  613
      |||||||||||||
seq2  CCCCAAAGAATTC  613

seq1: chr8_27944788_27945564
seq2: B6Ng01-055I21.g_66_845

seq1  GAATTCAAAGATGCCCTGGACTATAGAACACGTTCAAGGACAGCTTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGATGCCCTGGACTATAGAACACGTTCAAGGACAGCTTGAGA  50

seq1  TAAAATAGGAAGATGCTATCTCCAAAAATGCAAAAGGAAGGAAGGAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGGAAGATGCTATCTCCAAAAATGCAAAAGGAAGGAAGGAAGGA  100

seq1  AGGAAGGAAGGAAGGAAGGGGAAAGAGGAAGGGAAGGTGAAAGGAGACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGGGAAAGAGGAAGGGAAGGTGAAAGGAGACAG  150

seq1  AAAGAAGGAAGAGGGAACAAGGAAGGGATGATATAAAAGCAGGACGTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGGAAGAGGGAACAAGGAAGGGATGATATAAAAGCAGGACGTGGC  200

seq1  CCTTTCTTTTCTCCCCACATCTGCCTATGAACCAGAGGGATGAAGAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTTTCTCCCCACATCTGCCTATGAACCAGAGGGATGAAGAGCTG  250

seq1  ACCCTGGCTTCTCACTCTACTGATGTATTGAGACTGCCTCTCGCCTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGCTTCTCACTCTACTGATGTATTGAGACTGCCTCTCGCCTTGTC  300

seq1  TACGATACTGTTATGCTTTTCTTACAACAAACAATTGGCAGAAATGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATACTGTTATGCTTTTCTTACAACAAACAATTGGCAGAAATGAAAC  350

seq1  AAAACAAAACAAAACAAAAAAAAACCCAGGCTGCAGAACGCAGCCCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAAACAAAAAAAAACCCAGGCTGCAGAACGCAGCCCTTCT  400

seq1  TCCTCGTACTCATCTACGTACATCTATGTATTTTTTAAACTTGTTTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGTACTCATCTACGTACATCTATGTATTTTTTAAACTTGTTTTTCA  450

seq1  TCTCAGTGGTTCTAAGGCGTGCAGGCGTGATAAAACACAGATGGAGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGGTTCTAAGGCGTGCAGGCGTGATAAAACACAGATGGAGAGGA  500

seq1  GCAGACAACGATGCCATGCTCGCAGAAGACATCGCACCACGTTGTATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAACGATGCCATGCTCGCAGAAGACATCGCACCACGTTGTATGCT  550

seq1  TTCAGAAATCTTGGAAGACCTCAGGATGC-AAAGTAGGATTTTTCTTTTC  599
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCAGAAATCTTGGAAGACCTCAGGATGCAAAAGTAGGATTTTTCTTTTC  600

seq1  CCTCTTTGGGTCTTTCCCCTCCTTCCCTCTTCGTGTATTTGGAATTATCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTGGGTCTTTCCCCTCCTTCCCTCTTCGTGTATTTGGAATTATCT  650

seq1  CTTTGTCTC-TTCTGCGGCTGTGTGGCCCTTAGATCACCTGCTGCTGTTA  698
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTCTTTCTGCGGCTGTGTGGCCCTTAGATCACCTGCTGCTGTTA  700

seq1  GGAGCACTGTTGCTCTGCCTGGGCCACTGGGGCACTGCGATGCCCTGGGC  748
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGAGCACTGTTGCTCTGCCTGGGTCACTGGGGCACTGCGATGCCCTGGGC  750

seq1  TTGA-CCCCACCTCTACCTGAGCCTGTTTC  777
      |||| ||||||||| |||||||||||||||
seq2  TTGACCCCCACCTCAACCTGAGCCTGTTTC  780