BAC Information

Click to search

BAC

Clone NameB6Ng01-056G04
Chromosome8 (Build37)
Map Location 43,685,636 - 43,817,999
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039376, Gm1815, LOC671994, Zfp353, EG620772, LOC628212
Downstream geneTriml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056G04.bB6Ng01-056G04.g
ACCDH878559DH878560
length1,1221,145
definitionDH878559|Mus musculus domesticus DNA, BAC clone: B6Ng01-056G04, 5' end.DH878560|Mus musculus domesticus DNA, BAC clone: B6Ng01-056G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,685,636 - 43,686,770)(43,816,840 - 43,817,999)
sequence
gaattctgttagtaagatataacccagttaaactgttaaaaaacatttta
gaaaaacaaatatatgcatgatatttgtgaatgtgaagtcagttatcttg
aagattctttcccactgataataatattgaccaagctttcatgaaaaaca
aaacaaaacaacaacaacaaaaaaacaattacctaagaaatgagtgagga
aaaattcagtgtagcagacaatgtgataagtcgtgtttagctgggcagta
gtggtacatgcctttaatcccagcacttgggaggcagaggcaggtggatt
tctgagtttgaggtcaacttggtcctatagagttatttccagcaaagcca
agagtacacagagaaaccctatcttgagaaaccaaaaaaaaaaaaaaaaa
aaaatctagatagtactgattatgaaacctaaggctgaacttgtaggaat
ccccagaatattttatttttcaaaacgtcacttgttctggccatcttcta
ttgcttccttgccctagcttatctgtttaatacccctttcttacaaagag
gctcaatggatagaagcccaaggatgtttctgcagtccacggttcttact
agagcatcattgtcaatgctcagagcctacagtctaagatgctcccctca
cagaactttggctaggtttagcattactagtacctaagtttcatagatgc
ctataaaaacagaaccattgtcttcaggttctttttcccatgccttcatc
gtacatacatacatacatacatacatacttacatacatacacatcagaaa
catgctacaacttttagactcagaatatttcctaatcttatgtaaaaaca
ataagacaaaacaaaacagcgacaacagagagggaggaagatcactctaa
gagagaaggatacaaaatacagctatgcatgatggacagataccacttcc
tattttacagagaggagtttctttcttgagtacaatgtatctgatcagcc
cttgtctcccacatttctgtgacctcattcttaaggaaattatttttcat
tttatgctataacagtagtagaatctgactctttacctcctactagaatt
ttagctaatatccaatgattgt
gaattcactcacaaagaaagtgtacatctgggcttaatattgtgttaaat
gccaggatagcagcataaactagacattactgcctgacacaaattgtagt
tccagattcagtaacttgtgatcaagaccgaagtgacagtaatagaataa
taaattttctgccaagccagaaactgagtaaatacacaaaaagtttggga
tccgtgtcattaacactagaactgaagagatcatgaagtcaaaaagagca
aagtttgggagttatatacagacagatatatagagattaagaaaaaagtt
cagtaatttctagaagtgatttttcaatgtaaactacgtctgaggaatta
actccagacagtattttataaatgctttgctttatgctcaaagaatatta
agctgaatgtgatagtactcatctgcactgggtaccagcattgagaatct
aagaccaatctagatttcattggaaatctgcagcatagcaagcaaatgaa
actctgcctcgagaacaaaatacactaaaatcaaaatgcaaaatcaaaag
acctaatatttcttctgataactctgataaatgtagattgtactaaaaat
cgtagttaatctttctatgtggtgtctgactaagatacattcaagggcaa
gtttcattctctgaacatattatacattttaaaattattagtacaaaaca
gacaacattccagtaaaatatatattccattatattttaaaatattgcta
tttggtagtaacttgtcatttcatgagtgttttcttcagatatttttctg
tattgtttttactaagtcatataattaatggagtatatgaaggtttctag
ccatgtattatgaatggtgtctgactttatagagaaaatagaccacgaat
tatacataaatatttaatcaggaaacattataattacagtagtcaaagtt
acagcctgtgatgacataatacaatcacaaatggaggttttatttggttt
tagtaaaaccagtcttggggataattctttttttagtttttttttttaat
tttgagattctaattattacttatttccccttccttcattcatcaaaacc
ctcctcatcacacagccttttttattcctttcaatacagcttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_43685636_43686770
seq2: B6Ng01-056G04.b_44_1165

seq1  GAATTCTGTTAGTAAGATATAACCCAGTTAAACTGTTAAAAAACATTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTAGTAAGATATAACCCAGTTAAACTGTTAAAAAACATTTTA  50

seq1  GAAAAACAAATATATGCATGATATTTGTGAATGTGAAGTCAGTTATCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAAATATATGCATGATATTTGTGAATGTGAAGTCAGTTATCTTG  100

seq1  AAGATTCTTTCCCACTGATAATAATATTGACCAAGCTTTCATGAAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCTTTCCCACTGATAATAATATTGACCAAGCTTTCATGAAAAACA  150

seq1  AAACAAAACAACAACAACAAAAAAACAATTACCTAAGAAATGAGTGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAACAACAACAAAAAAACAATTACCTAAGAAATGAGTGAGGA  200

seq1  AAAATTCAGTGTAGCAGACAATGTGATAAGTCGTGTTTAGCTGGGCAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCAGTGTAGCAGACAATGTGATAAGTCGTGTTTAGCTGGGCAGTA  250

seq1  GTGGTACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATT  300

seq1  TCTGAGTTTGAGGTCAACTTGGTCCTATAGAGTTATTTCCAGCAAAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTTGAGGTCAACTTGGTCCTATAGAGTTATTTCCAGCAAAGCCA  350

seq1  AGAGTACACAGAGAAACCCTATCTTGAGAAACCAAAAAAAAAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACACAGAGAAACCCTATCTTGAGAAACCAAAAAAAAAAAAAAAAA  400

seq1  AAAATCTAGATAGTACTGATTATGAAACCTAAGGCTGAACTTGTAGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTAGATAGTACTGATTATGAAACCTAAGGCTGAACTTGTAGGAAT  450

seq1  CCCCAGAATATTTTATTTTTCAAAACGTCACTTGTTCTGGCCATCTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAATATTTTATTTTTCAAAACGTCACTTGTTCTGGCCATCTTCTA  500

seq1  TTGCTTCCTTGCCCTAGCTTATCTGTTTAATACCCCTTTCTTACAAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCCTTGCCCTAGCTTATCTGTTTAATACCCCTTTCTTACAAAGAG  550

seq1  GCTCAATGGATAGAAGCCCAAGGATGTTTCTGCAGTCCACGGTTCTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATGGATAGAAGCCCAAGGATGTTTCTGCAGTCCACGGTTCTTACT  600

seq1  AGAGCATCATTGTCAATGCTCAGAGCCTACAGTCTAAGATGCTCCCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATCATTGTCAATGCTCAGAGCCTACAGTCTAAGATGCTCCCCTCA  650

seq1  CAGAACTTTGGCTAGGTTTAGCATTACTAGTACCTAAGTTTCATAGATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTTTGGCTAGGTTTAGCATTACTAGTACCTAAGTTTCATAGATGC  700

seq1  CTATAAAAACAGAACCATTGTCTTCAGGTTCTTTTTCCCATGCCTTCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAAACAGAACCATTGTCTTCAGGTTCTTTTTCCCATGCCTTCATC  750

seq1  GTACATACATACATACATACATACATACTTACATACATACACATCAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATACATACATACATACATACATACTTACATACATACACATCAGAAA  800

seq1  CATGCTACAACTTTTAGACTCAGAATATTTCCTAATCTTATGTAAAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTACAACTTTTAGACTCAGAATATTTCCTAATCTTATGTAAAAACA  850

seq1  ATAAGACAAAACAAAACAGCGACAACAGAGAGGGAGGAAGATCACTCTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAAAACAAAACAGCGACAACAGAGAGGGAGGAAGATCACTCTAA  900

seq1  GAGAGAAGGATACAAAATACAGCTATGCATGATGGACAGATACCACTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAGGATACAAAATACAGCTATGCATGATGGACAGATACCACTTCC  950

seq1  TATTATTACAGAGAGGAGTTTCTTTCTTGAGGTTACAATGTATCTGATCA  1000
      |||| ||||||||||||||||||||||||||  |||||||||||||||||
seq2  TATT-TTACAGAGAGGAGTTTCTTTCTTGAG--TACAATGTATCTGATCA  997

seq1  GCCCTTGTCTCTCACATATCTTGGTGACCTCATTCTTAAGGGAAAATTTA  1050
      ||||||||||| ||||| |||  ||||||||||||||||||   || |||
seq2  GCCCTTGTCTCCCACATTTCT--GTGACCTCATTCTTAAGG---AAATTA  1042

seq1  TTTTTCATTTTATGCTATAACAGTAGGTAGAATCTGAACTC-TTACACTC  1099
      ||||||||||||||||||||||||| |||||||||| |||| ||||   |
seq2  TTTTTCATTTTATGCTATAACAGTA-GTAGAATCTG-ACTCTTTACCTCC  1090

seq1  TACTAAGATATTTAGCTAAATAATCCCAATGATTGT  1135
      |||| |||  ||||||| ||||   |||||||||||
seq2  TACT-AGAATTTTAGCT-AATA--TCCAATGATTGT  1122

seq1: chr8_43816840_43817999
seq2: B6Ng01-056G04.g_67_1211 (reverse)

seq1  AAGAAGCTGTGAATTTGAAAAGGAATAAAAAAAGCTGTGTGAGTGA-GAG  49
      ||||||||||  |||   |||||||||||||| ||||||||| ||| |||
seq2  AAGAAGCTGT--ATT--GAAAGGAATAAAAAAGGCTGTGTGA-TGAGGAG  45

seq1  AGTTTTGATGAATGAAAGGGAAGGAGAAATTATGTAATTATATTATGATC  99
       |||||||||||||||  |||||| |||| || |||||   ||||  |||
seq2  GGTTTTGATGAATGAA--GGAAGGGGAAA-TAAGTAAT--AATTAGAATC  90

seq1  TCAAAAATTAAAAAAAAAAAACTAAAAAAAAGAATTATCCCC-AGACTGG  148
      ||||||  | ||||||||||||| |||||||||||||||||| |||||||
seq2  TCAAAA--TTAAAAAAAAAAACT-AAAAAAAGAATTATCCCCAAGACTGG  137

seq1  TTTTTACTAAAACCAAATTAAAACCT-CATTTGTGATTGTATTATGTCAT  197
       |||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  -TTTTACTAAAACCAAA-TAAAACCTCCATTTGTGATTGTATTATGTCAT  185

seq1  CACAGGCTGTAACTTTGACTACTTGTAATTATAATGTTTCCTGATTAAAT  247
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CACAGGCTGTAACTTTGACTAC-TGTAATTATAATGTTTCCTGATTAAAT  234

seq1  ATTTATGTATAATTCGTGGTCTTATTTTCTCTTATAAAGTCAGACACCAT  297
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  ATTTATGTATAATTCGTGGTC-TATTTTCTC-TATAAAGTCAGACACCAT  282

seq1  TCATAATACATGGCTAGAAACCTTCATATACTCCATTAATTATATGACTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATACATGGCTAGAAACCTTCATATACTCCATTAATTATATGACTT  332

seq1  AGTAAAAACAATACAGAAAAATATCTGAAGAAAACACTCATGAAATGACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAACAATACAGAAAAATATCTGAAGAAAACACTCATGAAATGACA  382

seq1  AGTTACTACCAAATAGCAATATTTTAAAATATAATGGAATATATATTTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTACCAAATAGCAATATTTTAAAATATAATGGAATATATATTTTA  432

seq1  CTGGAATGTTGTCTGTTTTGTACTAATAATTTTAAAATGTATAATATGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATGTTGTCTGTTTTGTACTAATAATTTTAAAATGTATAATATGTT  482

seq1  CAGAGAATGAAACTTGCCCTTGAATGTATCTTAGTCAGACACCACATAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATGAAACTTGCCCTTGAATGTATCTTAGTCAGACACCACATAGA  532

seq1  AAGATTAACTACGATTTTTAGTACAATCTACATTTATCAGAGTTATCAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAACTACGATTTTTAGTACAATCTACATTTATCAGAGTTATCAGA  582

seq1  AGAAATATTAGGTCTTTTGATTTTGCATTTTGATTTTAGTGTATTTTGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATTAGGTCTTTTGATTTTGCATTTTGATTTTAGTGTATTTTGTT  632

seq1  CTCGAGGCAGAGTTTCATTTGCTTGCTATGCTGCAGATTTCCAATGAAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGGCAGAGTTTCATTTGCTTGCTATGCTGCAGATTTCCAATGAAAT  682

seq1  CTAGATTGGTCTTAGATTCTCAATGCTGGTACCCAGTGCAGATGAGTACT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTGGTCTTAGATTCTCAATGCTGGTACCCAGTGCAGATGAGTACT  732

seq1  ATCACATTCAGCTTAATATTCTTTGAGCATAAAGCAAAGCATTTATAAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATTCAGCTTAATATTCTTTGAGCATAAAGCAAAGCATTTATAAAA  782

seq1  TACTGTCTGGAGTTAATTCCTCAGACGTAGTTTACATTGAAAAATCACTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTGGAGTTAATTCCTCAGACGTAGTTTACATTGAAAAATCACTT  832

seq1  CTAGAAATTACTGAACTTTTTTCTTAATCTCTATATATCTGTCTGTATAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATTACTGAACTTTTTTCTTAATCTCTATATATCTGTCTGTATAT  882

seq1  AACTCCCAAACTTTGCTCTTTTTGACTTCATGATCTCTTCAGTTCTAGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCAAACTTTGCTCTTTTTGACTTCATGATCTCTTCAGTTCTAGTG  932

seq1  TTAATGACACGGATCCCAAACTTTTTGTGTATTTACTCAGTTTCTGGCTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGACACGGATCCCAAACTTTTTGTGTATTTACTCAGTTTCTGGCTT  982

seq1  GGCAGAAAATTTATTATTCTATTACTGTCACTTCGGTCTTGATCACAAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAAATTTATTATTCTATTACTGTCACTTCGGTCTTGATCACAAGT  1032

seq1  TACTGAATCTGGAACTACAATTTGTGTCAGGCAGTAATGTCTAGTTTATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAATCTGGAACTACAATTTGTGTCAGGCAGTAATGTCTAGTTTATG  1082

seq1  CTGCTATCCTGGCATTTAACACAATATTAAGCCCAGATGTACACTTTCTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATCCTGGCATTTAACACAATATTAAGCCCAGATGTACACTTTCTT  1132

seq1  TGTGAGTGAATTC  1160
      |||||||||||||
seq2  TGTGAGTGAATTC  1145