BAC Information

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BAC

Clone NameB6Ng01-056N01
Chromosome8 (Build37)
Map Location 59,664,841 - 59,665,401
singlet/doubletsinglet
Overlap genenone
Upstream geneHpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355
Downstream geneLOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056N01.bB6Ng01-056N01.g
ACCDH878860DH878861
length1,220820
definitionDH878860|Mus musculus domesticus DNA, BAC clone: B6Ng01-056N01, 5' end.DH878861|Mus musculus domesticus DNA, BAC clone: B6Ng01-056N01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcgtacattggggttttgagacttcacaggaacaaggaccactt
ctcccactgatgcaagataaagcaatcatctggtacatatgtggctacag
ccatgggtccctccatgtttggttctttagtccctgtgaactgtaggctc
tggttggttgataaaaaggaggatgcacactccttcagctccttcagtcc
tttttctaaacacttcatgtggaccctgtgctcagacccgtgttcggctg
agagcttctacctctgtgtttgtctggctctggcagtggtctaaggagac
agctatatcaggcttagaaggggtaatacaatacttatgggagcaaacag
ggagaaatggtatggaacagagactgaaggaaaggtcatccagaggctgc
cccacctggggatcaatcccatatactgctaccaaacacagacattatta
tggtttccaagaagtgcatgctgtcaggttttggtttgtttgtttgtttg
tttgtttaatgttttgttcatattctgaatactaaccatctattagacct
ataagttttaaagaccttttcttaatcacaaagcactatttattaattgt
tgtttttagagtctgtgtgatctgtatcctgttaagaaagtcttcctgtg
caaatgagttcaagcttattctcccctcctcttgcttatgaaattcaggg
tgcctgaccatacattgaggtctgtgcttcactttaagtttttgttgtat
gcagggtgatatagattccactaagtttctcacgctgaccttacattagt
cctttaacaaagaggagggtttttgttccaccttcattggcccccagagt
acctggagtaacaagaccactggaccagcccaatcttcttctgaggaatg
ttcctgctcagccctcttccttcacatatcttccagggtaatcttaaaac
gactcatggatcttcgctctaagtgtgcttttgagcagcacctccgtcta
caacagcatgtgcactatcaaccaccaggccctggagcagctgcagtatc
cttcttggaatcgagctaccaagttcataaaggctcaaagaaaatggact
cacctgccctgccccgttacaatgagcctttgtggggcaaagcaaaagtg
gtttaaatgatttgtctattacgaatcatgtacgtctctgccggaagtcc
ttttctctgtcacgtggtac
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtccagggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgttcaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgtttgttatgtctcccttttcatttctgatttttgtaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttttgatttctcaaagaaccaactcctcgtttggttaattctttgga
atagtcttcttgtttccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59664841_59665401
seq2: B6Ng01-056N01.g_329_888 (reverse)

seq1  AGTGGAAACAAGAAGAACTATT-CAAAGAATTAACCAAACGAGGAGTTGG  49
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  AGTGGAAACAAGAAG-ACTATTCCAAAGAATTAACCAAACGAGGAGTTGG  49

seq1  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAA  99
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  TTCTTTGAG-AAATCAA-AAGATAGATAAACCCTTAGCTAGACTCACTAA  97

seq1  AGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAG  149
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  AGGGCACAGGGACAAAATCCTAATTACAAAAATCAGAAATGAAAAGGGAG  147

seq1  ACATAAC-AACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTA  198
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACAAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTA  197

seq1  CAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAAT  248
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAAAAGGCTATACTCAACAAAACTGGAAAACCTGAACGAAATGGACAAAT  247

seq1  TTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTT  297

seq1  CTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCT  347

seq1  CCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATC  398
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCAGCCAAAAAAAGCCCTGGACCAGACGGGTTTAGTGCAGAGTTCTATC  397

seq1  AGACCTTCAAAGAAGATCTAACTCCAGTTCTGCACAAACTTTTTCACAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTCAAAGAAGATCTAACTCCAGTTCTGCACAAACTTTTTCACAAG  447

seq1  ATAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGCCACTATTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGCCACTATTAC  497

seq1  TCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGAC  547

seq1  CAATTTCTCTTAT  561
      |||||||||||||
seq2  CAATTTCTCTTAT  560