BAC Information

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BAC

Clone NameB6Ng01-057A15
Chromosome8 (Build37)
Map Location 38,324,612 - 38,435,457
singlet/doubletdoublet
Overlap geneLOC621149
Upstream geneEG544878, 6430573F11Rik, Dlc1, LOC100042892, A730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121
Downstream geneSgcz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057A15.bB6Ng01-057A15.g
ACCDH879025DH879026
length1,0591,118
definitionDH879025|Mus musculus domesticus DNA, BAC clone: B6Ng01-057A15, 5' end.DH879026|Mus musculus domesticus DNA, BAC clone: B6Ng01-057A15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,324,612 - 38,325,684)(38,434,327 - 38,435,457)
sequence
gaattcacttggcttcaacatttcttctgcttgtggatcattccaggaga
aatgtttgtattttagtgatttacaattcataggactgttttctgtatct
caggtgaggctggaagaggcctagacaatttttgaagaaaatttgatata
tatactacaagaggacttgaaacctgagtgaaaagaaatcaaataagttc
ttatattttattctactgacaactatcacaagtcaaatggaattcctact
gaatttaattacatgaaatgtctcactttgaaacttggaataacaggttt
ggctcagtaagaacagggatatatttttgaaatataaattgtggttttca
aatcttaagttcacagcttttgctgtctgatttttaaaaataatatagac
agattatgcaaggtgagccattgccaagaattacataattaactgaagat
acattaaactaaaattataaagcatttaggcagctagtttcttattaagt
agtttagagattccaatgttaacataaggaattaaaattataatatttct
ttagattatcaggcatagcttgataaataaaaaatagttaaaatagcaaa
gaaaaatagtttgtctaaaacaatatgaattctcatgtttacttctgaag
tgctaattacttaaaagaaataagaatgagaatgcactacttttctcaaa
attgtgacaaatgtacttgaggatggcttattttggttcatagtgggagg
ggatagatagcataactgggatgggagatatcttgatggctggagcagag
atagctggtcacacagtgctctaactcaagatgcagaatgagatgaacac
tggaacctagctctatttctcccttttgcttagtccagcatcccagcccg
aaagctgttactatccagattctgggtaatagaaacatctttctatacac
acttagaatgggttgccatggtgattctatatcctgtcagtgacgtgaga
aaatctccacaaaggaaccttaaagtcattgttttcttaagtctcttatt
ccagtatgg
gaattccagaccaacctggtgccctaccatccatttccctctgaccactt
atgctcctgtcatctctgctgaaaaagcctatcatgagcagctttctgta
gcagagatcaccaatgtctgttttgagccagccaattagatggtgaaatg
ggatcatcaccatgataaatacatgactttctgcctgctgtaccatggtg
atgtggttctcaagatgtcaatgctgctattgccaccatcaagacgaagc
ataacatcaagtctgtggactggtaccctactggcttcaaggttggcatt
aattaccagcttcccattgtggtgcctggtggcaatctggccagggttca
gagaactgtgtgcatgctgagcaacacccaagccattgctgaggcctggg
ctcacctacatcacaagtttgatctgatatattccaagcatgccctttgg
gcactggtatgtaggtgagcacatggaggaggggaagttctctgaggcct
gtgaggtcatggatgccctagagaaggattatcaggaggttggggcagat
agtactgaaggagatgatgaagaatactaattcgtgtgctgcaattttac
acttctgtggtctcatctttgtctttccatacattttaactgtcctaaac
tgtcaataaaagtgtttccaatttaagtggggaaaaaaagaatttatttt
cagtaaaagtaagaatataaatgtatatatttagttatatatatgtactt
aataatactctgattattgttcataataatcatgaacaatgattcatgtg
aaacttggaacacatatacaaaaaaccttacagaatctggttgatcatca
ccaagtcaaaatatttccttatatttccatatagacacaatgagaaaatc
atgaagctctaatcaaaacatgtcattctctttctgtcacacgtaagcag
atttttttatctcagagaaaaatttaaacctaatgtgtttggtattaaaa
tcagcaataatttaccattggtctacatgatttcgtaaaaaaattgtgga
agcattaatttcggaataactctttaaaccttaagaaattatcctcaatt
tttacttacgacttacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_38324612_38325684
seq2: B6Ng01-057A15.b_48_1106

seq1  GAATTCACTTGGCTTCAACATTTCTTCTGCTTGTGGATCATTCCAGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGGCTTCAACATTTCTTCTGCTTGTGGATCATTCCAGGAGA  50

seq1  AATGTTTGTATTTTAGTGATTTACAATTCATAGGACTGTTTTCTGTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGTATTTTAGTGATTTACAATTCATAGGACTGTTTTCTGTATCT  100

seq1  CAGGTGAGGCTGGAAGAGGCCTAGACAATTTTTGAAGAAAATTTGATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAGGCTGGAAGAGGCCTAGACAATTTTTGAAGAAAATTTGATATA  150

seq1  TATACTACAAGAGGACTTGAAACCTGAGTGAAAAGAAATCAAATAAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTACAAGAGGACTTGAAACCTGAGTGAAAAGAAATCAAATAAGTTC  200

seq1  TTATATTTTATTCTACTGACAACTATCACAAGTCAAATGGAATTCCTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTATTCTACTGACAACTATCACAAGTCAAATGGAATTCCTACT  250

seq1  GAATTTAATTACATGAAATGTCTCACTTTGAAACTTGGAATAACAGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAATTACATGAAATGTCTCACTTTGAAACTTGGAATAACAGGTTT  300

seq1  GGCTCAGTAAGAACAGGGATATATTTTTGAAATATAAATTGTGGTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGTAAGAACAGGGATATATTTTTGAAATATAAATTGTGGTTTTCA  350

seq1  AATCTTAAGTTCACAGCTTTTGCTGTCTGATTTTTAAAAATAATATAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAAGTTCACAGCTTTTGCTGTCTGATTTTTAAAAATAATATAGAC  400

seq1  AGATTATGCAAGGTGAGCCATTGCCAAGAATTACATAATTAACTGAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATGCAAGGTGAGCCATTGCCAAGAATTACATAATTAACTGAAGAT  450

seq1  ACATTAAACTAAAATTATAAAGCATTTAGGCAGCTAGTTTCTTATTAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAACTAAAATTATAAAGCATTTAGGCAGCTAGTTTCTTATTAAGT  500

seq1  AGTTTAGAGATTCCAATGTTAACATAAGGAATTAAAATTATAATATTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGAGATTCCAATGTTAACATAAGGAATTAAAATTATAATATTTCT  550

seq1  TTAGATTATCAGGCATAGCTTGATAAATAAAAAATAGTTAAAATAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTATCAGGCATAGCTTGATAAATAAAAAATAGTTAAAATAGCAAA  600

seq1  GAAAAATAGTTTGTCTAAAACAATATGAATTCTCATGTTTACTTCTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAGTTTGTCTAAAACAATATGAATTCTCATGTTTACTTCTGAAG  650

seq1  TGCTAATTACTTAAAAGAAATAAGAATGAGAATGCACTACTTTTCTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATTACTTAAAAGAAATAAGAATGAGAATGCACTACTTTTCTCAAA  700

seq1  ATTGTGACAAATGTACTTGAGGATGGCTTATTTTGGTTCATAGTGGGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGACAAATGTACTTGAGGATGGCTTATTTTGGTTCATAGTGGGAGG  750

seq1  GGATAGATAGCATAACTGGGATGGGAGATATCTTGATGGCTGGAGCAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGATAGATAGCATAACTGGGATGGGAGATATCTTGATGGCTGGAGCA-GA  799

seq1  GATAGCTGGTCACACAGTGCTCTAACTCAAGATGCAGAATGAGATGAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTGGTCACACAGTGCTCTAACTCAAGATGCAGAATGAGATGAACA  849

seq1  CTGGAACCTAGCTCTATTTCTCCCTTTTGCTTAGGTCCAGCATCCCAGCC  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTGGAACCTAGCTCTATTTCTCCCTTTTGCTTA-GTCCAGCATCCCAGCC  898

seq1  CGAAGGCTGTTACTATCCAGATTCTGGGTAAATAGAAACATCTTTCTATA  950
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGAAAGCTGTTACTATCCAGATTCTGGGT-AATAGAAACATCTTTCTATA  947

seq1  CACACTTAGAAATGGGTTGCCATGGTGATTCTATATCCTGTCAAGTTGAC  1000
      ||||||||| |||||||||||||||||||||||||||||||||   ||||
seq2  CACACTTAG-AATGGGTTGCCATGGTGATTCTATATCCTGTCA--GTGAC  994

seq1  AGTGAAGATAAATTCTCACAAACAGAAACCTTAAAGTCATTTGTTTTCTT  1050
       ||   || ||| |||| || | || ||||||||||||| ||||||||||
seq2  -GT---GAGAAAATCTC-CACAAAGGAACCTTAAAGTCA-TTGTTTTCTT  1038

seq1  AAGTCTCTTATTCCACAGTATGG  1073
      |||||||||||||  ||||||||
seq2  AAGTCTCTTATTC--CAGTATGG  1059

seq1: chr8_38434327_38435457
seq2: B6Ng01-057A15.g_69_1186 (reverse)

seq1  ATGTAAGTATGTATGTATGTATGTAAAGAATTGAGGATAA-TTCTTAAGG  49
              ||||| ||  ||| ||||| |||||||||||| |||||||||
seq2  --------ATGTAAGT-CGTAAGTAAA-AATTGAGGATAATTTCTTAAGG  40

seq1  TTTATAAGAGTGTATCTGAAATTAATGCTTCAACATATTTTTTTTACGGA  99
      |||| ||||||   || ||||||||||||||  || | ||||||||| ||
seq2  TTTA-AAGAGTTATTCCGAAATTAATGCTTC--CACAATTTTTTTAC-GA  86

seq1  AATCATGTAGA-CAATGGTTAAATTATTGCTGATATT-ATACCATACACA  147
      ||||||||||| |||||| ||||||||||||||| || |||||| |||||
seq2  AATCATGTAGACCAATGG-TAAATTATTGCTGATTTTAATACCAAACACA  135

seq1  TTAAGGTTAAATTTTTCTCTTGAGATAAAATAATCTGCTTACGTGTGACA  197
      ||| | ||||||||||||| |||||||||| |||||||||||||||||||
seq2  TTAGGTTTAAATTTTTCTC-TGAGATAAAAAAATCTGCTTACGTGTGACA  184

seq1  GAAAGAGAATGACATGTTTTGATTAGAGCTTCATGATTTTCTCATTGTGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAATGACATGTTTTGATTAGAGCTTCATGATTTTCTCATTGTGT  234

seq1  CTATATGGAAATATAAGGAAATATTTTGACTTGGTGATGATCAACCAGAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGGAAATATAAGGAAATATTTTGACTTGGTGATGATCAACCAGAT  284

seq1  TCTGTAAGGTTTTTTGTATATGTGTTCCAAGTTTCACATGAATCATTGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGGTTTTTTGTATATGTGTTCCAAGTTTCACATGAATCATTGTT  334

seq1  CATGATTATTATGAACAATAATCAGAGTATTATTAAGTACATATATATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTATTATGAACAATAATCAGAGTATTATTAAGTACATATATATAA  384

seq1  CTAAATATATACATTTATATTCTTACTTTTACTGAAAATAAATTCTTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATATACATTTATATTCTTACTTTTACTGAAAATAAATTCTTTTT  434

seq1  TTCCCCACTTAAATTGGAAACACTTTTATTGACAGTTTAGGACAGTTAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACTTAAATTGGAAACACTTTTATTGACAGTTTAGGACAGTTAAA  484

seq1  ATGTATGGAAAGACAAAGATGAGACCACAGAAGTGTAAAATTGCAGCACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGGAAAGACAAAGATGAGACCACAGAAGTGTAAAATTGCAGCACA  534

seq1  CGAATTAGTATTCTTCATCATCTCCTTCAGTACTATCTGCCCCAACCTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATTAGTATTCTTCATCATCTCCTTCAGTACTATCTGCCCCAACCTCC  584

seq1  TGATAATCCTTCTCTAGGGCATCCATGACCTCACAGGCCTCAGAGAACTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATCCTTCTCTAGGGCATCCATGACCTCACAGGCCTCAGAGAACTT  634

seq1  CCCCTCCTCCATGTGCTCACCTACATACCAGTGCCCAAAGGGCATGCTTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTCCATGTGCTCACCTACATACCAGTGCCCAAAGGGCATGCTTG  684

seq1  GAATATATCAGATCAAACTTGTGATGTAGGTGAGCCCAGGCCTCAGCAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATCAGATCAAACTTGTGATGTAGGTGAGCCCAGGCCTCAGCAAT  734

seq1  GGCTTGGGTGTTGCTCAGCATGCACACAGTTCTCTGAACCCTGGCCAGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGGTGTTGCTCAGCATGCACACAGTTCTCTGAACCCTGGCCAGAT  784

seq1  TGCCACCAGGCACCACAATGGGAAGCTGGTAATTAATGCCAACCTTGAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCAGGCACCACAATGGGAAGCTGGTAATTAATGCCAACCTTGAAG  834

seq1  CCAGTAGGGTACCAGTCCACAGACTTGATGTTATGCTTCGTCTTGATGGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAGGGTACCAGTCCACAGACTTGATGTTATGCTTCGTCTTGATGGT  884

seq1  GGCAATAGCAGCATTGACATCTTGAGAACCACATCACCATGGTACAGCAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATAGCAGCATTGACATCTTGAGAACCACATCACCATGGTACAGCAG  934

seq1  GCAGAAAGTCATGTATTTATCATGGTGATGATCCCATTTCACCATCTAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGTCATGTATTTATCATGGTGATGATCCCATTTCACCATCTAAT  984

seq1  TGGCTGGCTCAAAACAGACATTGGTGATCTCTGCTACAGAAAGCTGCTCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGCTCAAAACAGACATTGGTGATCTCTGCTACAGAAAGCTGCTCA  1034

seq1  TGATAGGCTTTTTCAGCAGAGATGACAGGAGCATAAGTGGTCAGAGGGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGCTTTTTCAGCAGAGATGACAGGAGCATAAGTGGTCAGAGGGAA  1084

seq1  ATGGATGGTAGGGCACCAGGTTGGTCTGGAATTC  1131
      ||||||||||||||||||||||||||||||||||
seq2  ATGGATGGTAGGGCACCAGGTTGGTCTGGAATTC  1118