BAC Information

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BAC

Clone NameB6Ng01-057H09
Chromosome8 (Build37)
Map Location 36,814,863 - 36,927,728
singlet/doubletdoublet
Overlap geneLOC100041572, Gm501, Cldn23
Upstream geneDusp4, LOC675578, Tnks, LOC666792, LOC666797, LOC666804, Ppp1r3b, Thex1, Mfhas1
Downstream geneLOC671641, D8Ertd82e, Lonrf1, EG544878, 6430573F11Rik, Dlc1, LOC100042892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057H09.bB6Ng01-057H09.g
ACCDH879321DH879322
length967284
definitionDH879321|Mus musculus domesticus DNA, BAC clone: B6Ng01-057H09, 5' end.DH879322|Mus musculus domesticus DNA, BAC clone: B6Ng01-057H09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,926,762 - 36,927,728)(36,814,863 - 36,815,146)
sequence
gaattctgtagtcaacatttgatttttttttttccttagctcctcatgct
gatcccttactattgagaagcacaacaaaccctgtagggaaacactgtga
actaagacccgatgtttgggtggtaatggctttttacttatagagatgac
atttaccagactaacctggttggcaagtagccgagttggggaccggactc
tccagattctggctttgctttggcaattctaagtgggaagatagtgttgg
tgacattttatgcaagagaattgggggtccagtatgctcaagagactcag
attctgagctgtcctgtgagccaattaattgcctcttcatctaagccagt
tctcaactgctgacaccctttaatacagtacctcaggttatggtaaaccc
ccaaccgtaaaattattttcatggatacattataactttaatttcgcttc
tgtgtgaatcgaatattttttgaagacggaagtttgccaaaggagtctcg
acccacaggttgaaaatcatgatctaattcatctcttgtccttctgcccc
cagctcctcagtaaaagtcgacatgctcatttatgattttatgagttttc
tggcatagcgtttatttgcttatttatgtggtgtatgtacgtgttcacat
gtgtgtgcatatggaagccagagctggatgctgggtttcttccgtggtcg
ctccccaccttgttttttgagtcagggtttctcactgaaactggatatcc
tccatccatctaggcttgctggcccaggagccagagggatccgcccacct
ttgcttccccctggttctggggttacaaatgcactgtagccaatgcccgc
ttttacatgattgctggaggtctgaatgcagggtctcacccctacacagc
agccactttactgaatggcctatgttcagcccttgatacatttttgaata
agtggatcagataatta
cagggatccaacacttttatgcccttattgggtactttcatgactgtggc
aagtggcatagggggtgggggaggggtgcgcatgcgtgcacatactgcat
aaaggaataaaagaaagatccatgcaaagtacaaggtacgtgacagcatg
ttattaagacagttatgaaacgatgacagtttgactcctcatggcaacca
actgtcaggaaaccatcactttttaaacattactgtcagtactcattttc
ccatggaagagaagcatcttgcctcacaggcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_36926762_36927728
seq2: B6Ng01-057H09.b_47_1013 (reverse)

seq1  TAATTATCTGAT-CACTTATTCAAAAATGTATCAAAGGGCTGGACATAGG  49
      |||||||||||| |||||||||||||||||||| |||||||| |||||||
seq2  TAATTATCTGATCCACTTATTCAAAAATGTATC-AAGGGCTGAACATAGG  49

seq1  CCATTCAGTAAAGTGGCTGCTGTGTAGGGGTGAGACCCTGCATTCAGACC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAGTAAAGTGGCTGCTGTGTAGGGGTGAGACCCTGCATTCAGACC  99

seq1  TCCAGCAATCATGTAAAAGCGGGCATTGGCTACAGTGCATTTGTAACCCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAATCATGTAAAAGCGGGCATTGGCTACAGTGCATTTGTAACCCC  149

seq1  AGAACCAGGGGGAAGCAAAGGTGGGCGGATCCCTCTGGCTCCTGGGCCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAGGGGGAAGCAAAGGTGGGCGGATCCCTCTGGCTCCTGGGCCAG  199

seq1  CAAGCCTAGATGGATGGAGGATATCCAGTTTCAGTGAGAAACCCTGACTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTAGATGGATGGAGGATATCCAGTTTCAGTGAGAAACCCTGACTC  249

seq1  AAAAAACAAGGTGGGGAGCGACCACGGAAGAAACCCAGCATCCAGCTCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAGGTGGGGAGCGACCACGGAAGAAACCCAGCATCCAGCTCTG  299

seq1  GCTTCCATATGCACACACATGTGAACACGTACATACACCACATAAATAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCATATGCACACACATGTGAACACGTACATACACCACATAAATAAG  349

seq1  CAAATAAACGCTATGCCAGAAAACTCATAAAATCATAAATGAGCATGTCG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAACGCTATGCCAGAAAACTCATAAAATCATAAATGAGCATGTCG  399

seq1  ACTTTTACTGAGGAGCTGGGGGCAGAAGGACAAGAGATGAATTAGATCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTACTGAGGAGCTGGGGGCAGAAGGACAAGAGATGAATTAGATCAT  449

seq1  GATTTTCAACCTGTGGGTCGAGACTCCTTTGGCAAACTTCCGTCTTCAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCAACCTGTGGGTCGAGACTCCTTTGGCAAACTTCCGTCTTCAAA  499

seq1  AAATATTCGATTCACACAGAAGCGAAATTAAAGTTATAATGTATCCATGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCGATTCACACAGAAGCGAAATTAAAGTTATAATGTATCCATGA  549

seq1  AAATAATTTTACGGTTGGGGGTTTACCATAACCTGAGGTACTGTATTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTTTACGGTTGGGGGTTTACCATAACCTGAGGTACTGTATTAAA  599

seq1  GGGTGTCAGCAGTTGAGAACTGGCTTAGATGAAGAGGCAATTAATTGGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCAGCAGTTGAGAACTGGCTTAGATGAAGAGGCAATTAATTGGCT  649

seq1  CACAGGACAGCTCAGAATCTGAGTCTCTTGAGCATACTGGACCCCCAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGACAGCTCAGAATCTGAGTCTCTTGAGCATACTGGACCCCCAATT  699

seq1  CTCTTGCATAAAATGTCACCAACACTATCTTCCCACTTAGAATTGCCAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCATAAAATGTCACCAACACTATCTTCCCACTTAGAATTGCCAAA  749

seq1  GCAAAGCCAGAATCTGGAGAGTCCGGTCCCCAACTCGGCTACTTGCCAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCCAGAATCTGGAGAGTCCGGTCCCCAACTCGGCTACTTGCCAAC  799

seq1  CAGGTTAGTCTGGTAAATGTCATCTCTATAAGTAAAAAGCCATTACCACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAGTCTGGTAAATGTCATCTCTATAAGTAAAAAGCCATTACCACC  849

seq1  CAAACATCGGGTCTTAGTTCACAGTGTTTCCCTACAGGGTTTGTTGTGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATCGGGTCTTAGTTCACAGTGTTTCCCTACAGGGTTTGTTGTGCT  899

seq1  TCTCAATAGTAAGGGATCAGCATGAGGAGCTAAGGAAAAAAAAAAATCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATAGTAAGGGATCAGCATGAGGAGCTAAGGAAAAAAAAAAATCAA  949

seq1  ATGTTGACTACAGAATTC  967
      ||||||||||||||||||
seq2  ATGTTGACTACAGAATTC  967

seq1: chr8_36814863_36815146
seq2: B6Ng01-057H09.g_82_365

seq1  CAGGGATCCAACACTTTTATGCCCTTATTGGGTACTTTCATGACTGTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATCCAACACTTTTATGCCCTTATTGGGTACTTTCATGACTGTGGC  50

seq1  AAGTGGCATAGGGGGTGGGGGAGGGGTGCGCATGCGTGCACATACTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGCATAGGGGGTGGGGGAGGGGTGCGCATGCGTGCACATACTGCAT  100

seq1  AAAGGAATAAAAGAAAGATCCATGCAAAGTACAAGGTACGTGACAGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATAAAAGAAAGATCCATGCAAAGTACAAGGTACGTGACAGCATG  150

seq1  TTAGTAAGACAGTTATGAAACGATGACAGTTTGACTCCTCATGGCAACCA  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGACAGTTATGAAACGATGACAGTTTGACTCCTCATGGCAACCA  200

seq1  ACTGTCAGGAAACCATCACTTTTTAAACATTACTGTCAGTACTCATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAGGAAACCATCACTTTTTAAACATTACTGTCAGTACTCATTTTC  250

seq1  CCATGGAAGAGAAGCATCTTGCCTCACAGGCAGG  284
      ||||||||||||||||||||||||||||||||||
seq2  CCATGGAAGAGAAGCATCTTGCCTCACAGGCAGG  284