BAC Information

Click to search

BAC

Clone NameB6Ng01-057K14
Chromosome8 (Build37)
Map Location 32,985,934 - 32,986,311
singlet/doubletsinglet
Overlap geneNrg1
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340
Downstream gene2010007E15Rik, EG666589, EG546052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057K14.bB6Ng01-057K14.g
ACCDH879466DH879467
length1,011375
definitionDH879466|Mus musculus domesticus DNA, BAC clone: B6Ng01-057K14, 5' end.DH879467|Mus musculus domesticus DNA, BAC clone: B6Ng01-057K14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgtgtatgccccacattttccttatgcatttatcagttgaa
ggacatttaggttgtttccattatacattgagcaacaatgaatgtggtgg
agcaggtatacggcagtagaatattgaatcttttgaatatttgccaaaga
aagatatagttgggtcctatagtagctttacttttagtttcttgggcatt
ttccacagtgatttccaatgtgggctgcagcagttttcacttccaccaac
acttcccctcctccttgccagcatttgtcctcagttgttttcctgattgt
acccatttggattggagtacaaggaaatgtcaaagtagtttattgtgcat
ttccctaactgctaaggatcttgaacatgttttaaattttcttatccata
tttacttctttctgttcagatctttagcccatttcttagttatgtaattt
gttttctcagttcttggagttcttcatatattttgtatggaagtcctcaa
ttatatgcataggtggcaaagattccaggcttctctgtaggcttcctctt
cattggagtgattgtttcctttggtgcacataagtttttaagttttatga
ggtgccatcctgtttttgttatttctttcctgtacctgtatcttgtagag
tacttctgctgttttgtttttcctagcaatttctaccattttgggttcca
cactgaggtcttatttagagtaggtttttccccacggtgataaaaccagg
tctgaatttattcttctacatggagacatctacttttttgcagcaccact
tgttaaagatactgtttaaccttcagtgaatattttagcatgtttgtcaa
atagcagatgcatgtctgtttattttgtggccagtttcatgttgccttat
tactatagcttctgtaatgagtttgaaatctgaaaaggtatcgaatcaat
ttgtccttttgctaagaaactttgtttacccagtgtctttgggttcatat
gaatattacta
caatgacatgtgaagaactcctggagtcgtttctcatttgtggacttagc
attcccatgtagaagggctcagtacagcttccgaggcttccgctttcatt
gtcacaagcatccttcctctggaaatgatattgctcatggtttgttgctt
tttcctgtagggttcctaagtatatcgttactcagtaatatgggaggaga
tgggaggacctgagttctattcccagaacctatataaatttgggaagaga
gagtcaaaaccccaaagttgtcttctgatggtcatgcatgtgccatgaaa
cacacacatacactataaaaaattatacacacacacacttgtgtgtgtgt
gtgtttttatagtgtatgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32985934_32986311
seq2: B6Ng01-057K14.g_69_449 (reverse)

seq1  ACACACACATACAC---GCACACACACACACACACAAGTGTGTGTGTGTA  47
      ||||||||||||||     | |||||||||||||||||||||||||||||
seq2  ACACACACATACACTATAAAAACACACACACACACAAGTGTGTGTGTGTA  50

seq1  TAATTTTTTATAGTGTATGTGTGTGTTTCATGGCACATGCATGACCATCA  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTATAGTGTATGTGTGTGTTTCATGGCACATGCATGACCATCA  100

seq1  GAAGACAACTTTGGGGTTTTGACTCTCTCTTCCCAAATTTATATAGGTTC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAACTTTGGGGTTTTGACTCTCTCTTCCCAAATTTATATAGGTTC  150

seq1  TGGGAATAGAACTCAGGTCCTCCCATCTCCTCCCATATTACTGAGTAACG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATAGAACTCAGGTCCTCCCATCTCCTCCCATATTACTGAGTAACG  200

seq1  ATATACTTAGGAACCCTACAGGAAAAAGCAACAAACCATGAGCAATATCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTAGGAACCCTACAGGAAAAAGCAACAAACCATGAGCAATATCA  250

seq1  TTTCCAGAGGAAGGATGCTTGTGACAATGAAAGCGGAAGCCTCGGAAGCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAGGAAGGATGCTTGTGACAATGAAAGCGGAAGCCTCGGAAGCT  300

seq1  GTACTGAGCCCTTCTACATGGGAATGCTAAGTCCACAAATGAGAAACGAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAGCCCTTCTACATGGGAATGCTAAGTCCACAAATGAGAAACGAC  350

seq1  TCCAGGAGTTCTTCACATGTCATTGGAATTC  378
      |||||||||||||||||||||||||||||||
seq2  TCCAGGAGTTCTTCACATGTCATTGGAATTC  381