BAC Information

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BAC

Clone NameB6Ng01-057N02
Chromosome8 (Build37)
Map Location 67,991,806 - 67,992,661
singlet/doubletsinglet
Overlap genenone
Upstream geneCpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1
Downstream geneLOC100040967, March1, LOC100040986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057N02.bB6Ng01-057N02.g
ACCDH879572DH879573
length1,2541,035
definitionDH879572|Mus musculus domesticus DNA, BAC clone: B6Ng01-057N02, 5' end.DH879573|Mus musculus domesticus DNA, BAC clone: B6Ng01-057N02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagggcccatacttaaacatgatgaaagcaatctagagcaaacca
gtagccaacatcaaagtaaatggtgaaaagctggaagcaatcccactaaa
atcagggactagacaaggctgcacactttctccctacctattcaacattg
tacttgaagttctagccagggcaattcaacaaaaaaggagatcaagggga
tacaaattggcaaggaagtcaaaatatcactttttgcagatgatatgata
gtatatataagtgaccctaaaaattccaccagagaactcctaaacctgat
aaacagcttcaatgaagtagctggatatgaaattaactcaaacaagtcaa
tggcctttctgtacacaaaggataaacaggctgagaaagaaattagggaa
acaacacccttctcaatagtcacaaacaatataaaataccttggcatgac
tctaactaaggaagtgaaagatctgtatgataagaacttcaagtctcaga
agaaagaaattaaagaagatctcagaagatggaaagatctcccatgctca
tggattggcaggatcaacattgtaaaaatggctatcttgccaaaaacaat
ctacagattcaatgaaatacccatcaatatcccaactcaattcttcaact
aattagaaagggcaattttcaaattcatctggaataacaaaaaacctagg
atagcaaaaaactctgctcaaggataaaaaaaacctctgatggaatcacc
atgcctgacctaaagctttactacagagaaattgtgataaaaactgcatg
gtactggtatagcaacagacaagtagaccagtggaatagaattgaagacc
cagaaatgaacccacacacctatggtcacttgatcttcgacaagggagct
aaaaccatccagtggaagaaagacagcattttcaacaaatggtgctggca
caactggctgttaacatgtagaagaatgcgacttatccattcctatctct
gtactaagtcaaatctagtgatcaggactcacataaaccagagacactga
aactatagaggagaaagtaggaagcttgaagaatggtacaggaaaatctg
aatgaacagcaatgcttgtcttagatggagaatcgaaatgacctcatgaa
ctgcagctctggcaagcaaagactcgtttatagacaaaagacctccactg
attggaagacttacatgctatcgaataggacatattatattaaaagtaat
ctga
gaattcttcagtcattcttagaaggtggaacaaaatactcaggggaggta
ttacagagacaaagtgtagagcagagactgaaagaaaggccatccagaga
ctgccccacctggggatccatctcatatacagacaccaaacccagacact
actgtgggtgtcaagaagtgcttgctgacaggagcctgatatagctatct
cctgagaggctctggcagaacctgacatatacagaggatgatgatcacag
ctagccattagactgagcacgtggttctcaataaaaaagttagataaagg
actgaagtagctgaagggatttgcatcccattggaagaacaacaatataa
actaaccagaatccccagagctctcagggattaaaccactaaccaaagtg
tacacatggaaggacctacggcttcagccgcatatgtagccgaggatgac
cttgtcaggcatcaatgggaggaaaggcccttggtcctgtgaagacttga
tgccccagtgtaggggaattccaggatggggagaaacgattgtgtgagtc
ggagggggagcaccctcatagaagcagagagagggaggatgagatagggg
gtttctagaggagaaatcgggaaaagggataacattagaaatgtaaataa
ataaaatatccaataaaagatattaaaaaaaaaaagaaaataaaagctga
ggggaccctccctgtcctcattttaacatttacctgtttcagaatccaaa
ttctaacactgattttgaattctcattttactgtctatgtaagaaagtgg
ttttattatgaaccattttactatgctaggataatttttaatagctgagt
agatttcaataaaggcagacattatgttcttaatttgttgtgcattgtct
ttctcaatgtataaaaattaggtccatgacacttactggactatttggaa
agcagatgagggttgtgttcggagacattcatgcttcacatacagtttat
atgtttcatatggtggaacactgaaatttacattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_67991806_67992661
seq2: B6Ng01-057N02.g_252_1102

seq1  CCTGATATAGCTATCTCCTGAGAGGCTCTGGCAGAACCTGACATATACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATATAGCTATCTCCTGAGAGGCTCTGGCAGAACCTGACATATACAG  50

seq1  AGGATGATGATCACAGCTAGCCATTAGACTGAGCACGTGGTTCTCAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGATGATCACAGCTAGCCATTAGACTGAGCACGTGGTTCTCAATAA  100

seq1  AAAAGTTAGATAAAGGACTGAAGTAGCTGAAGGGATTTGCATCCCATTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTAGATAAAGGACTGAAGTAGCTGAAGGGATTTGCATCCCATTGG  150

seq1  AAGAACAACAATATAAACTAACCAGAATCCCCAGAGCTCTCAGGGATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAACAATATAAACTAACCAGAATCCCCAGAGCTCTCAGGGATTAA  200

seq1  ACCACTAACCAAAGTGTACACATGGAAGGACCTACGGCTTCAGCCGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTAACCAAAGTGTACACATGGAAGGACCTACGGCTTCAGCCGCATA  250

seq1  TGTAGCCGAGGATGACCTTGTCAGGCATCAATGGGAGGAAAGGCCCTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCGAGGATGACCTTGTCAGGCATCAATGGGAGGAAAGGCCCTTGG  300

seq1  TCCTGTGAAGACTTGATGCCCCAGTGTAGGGGAATTCCAGGATGGGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGAAGACTTGATGCCCCAGTGTAGGGGAATTCCAGGATGGGGAGA  350

seq1  AACGATTGTGTGAGTCGGAGGGGGAGCACCCTCATAGAAGCAGAGAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATTGTGTGAGTCGGAGGGGGAGCACCCTCATAGAAGCAGAGAGAGG  400

seq1  GAGGATGAGATAGGGGGTTTCTAGAGGAGAAATCGGGAAAAGGGATAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGAGATAGGGGGTTTCTAGAGGAGAAATCGGGAAAAGGGATAACA  450

seq1  TTAGAAATGTAAATAAATAAAATATCCAATAAAAGATATTAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATGTAAATAAATAAAATATCCAATAAAAGATATTAAAAAAAAAA  500

seq1  AGAAAATAAAAGCTGAGGGGACCCTCCCTGTCCTCATTTTAACATTTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAAAAGCTGAGGGGACCCTCCCTGTCCTCATTTTAACATTTACC  550

seq1  TGTTTCAGAATCCAAATTCTAACACTGATTTTGAATTCTCATTTTACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGAATCCAAATTCTAACACTGATTTTGAATTCTCATTTTACTGT  600

seq1  CTATGTAAGAAAGTGGTTTTATTATGAACCATTTTACTATGCTAGGATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTAAGAAAGTGGTTTTATTATGAACCATTTTACTATGCTAGGATAA  650

seq1  TTTTTAATAGCTGAGTAGATTTCAATAAAGGCAGACATTATG-TCTTAAT  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTTTAATAGCTGAGTAGATTTCAATAAAGGCAGACATTATGTTCTTAAT  700

seq1  TTGTTGTGCATTGTCTTTCTCAATGTATTAAAAATTAGGTCCATGACAC-  748
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  TTGTTGTGCATTGTCTTTCTCAATGTA-TAAAAATTAGGTCCATGACACT  749

seq1  TACTGAACTCATTTGGAAAGCAGATGAGGGTTTGTGTTCGTAGACATTCA  798
      ||||| ||| |||||||||||||||||||| ||||||||| |||||||||
seq2  TACTGGACT-ATTTGGAAAGCAGATGAGGG-TTGTGTTCGGAGACATTCA  797

seq1  TTGCTTCACATACAGTTTTATATGTTTTTATATGTTGAAACACTGAAAAT  848
       |||||||||||||| |||||||| ||| ||||| || ||||||| ||||
seq2  -TGCTTCACATACAG-TTTATATG-TTTCATATGGTGGAACACTG-AAAT  843

seq1  TTACATTC  856
      ||||||||
seq2  TTACATTC  851