BAC Information

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BAC

Clone NameB6Ng01-060G04
Chromosome16 (Build37)8 (Build37)
Map Location 86,882,313 - 86,883,44310,585,485 - 10,585,558
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060G04.bB6Ng01-060G04.g
ACCDH881372DH881373
length1,116837
definitionDH881372|Mus musculus domesticus DNA, BAC clone: B6Ng01-060G04, 5' end.DH881373|Mus musculus domesticus DNA, BAC clone: B6Ng01-060G04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(86,882,313 - 86,883,443)(10,585,485 - 10,585,558)
sequence
gaattcttttgatgtaatgtaatgaattaaaggattttgaaagtgttgat
ggctttaagattttttttctaaattcaagcaccccaagttttgaagcatt
gactgactatattggattaatacactaagacttagagaaaaatgttatgg
ctctaacatttgaaaattccatgtagtttctagtgataaagtgttattct
cttgccttcatctgttgctttctctgacttccaatttttgctcgaaactt
taaaagtatcatctcagagtaaaagtccgaggggagcaggttaagtcatg
cacaccctggcagcttcaagaatgtcatgcgttctgggtttaacagctgc
ttcgtgagacccacagcctaaagttctccctcctacattctactgcaaaa
gcctgaaggctagtttcagaacatttctgaattcctcactccaactagca
tgctacagaaactgagggactcttttcggacacaagatggcagtagcaca
ccgttcacattgatcatttcctcagagggattgtagtcacacaaatcagt
tattttgtggtaagttaaaagtccccctgaaagaggagggaaaaggccct
ttaagattatgactagtaccgtaaccaccttttccctacaaccccaactg
tcatatctatacatttctgatgtagtccttcaatgactttcaagaacaga
atgaaatacaaaaagttcaggagtctccgtatcaaggaaagaaatgccta
agaaagcaaggtcaaccattatgaagatgccctgcatcaatagccttgag
actacatactgtgttctcacaataaagtaggtttgagaggctatttattg
atgttcaacttgatttacaacaatcctttgttatcattgggtttttgtat
tatttcttttctttatggaattttggagttttgctttttctagttttctg
agttcaaacacaccacacacacacacacacacacacacacacacacacac
acacacagttgttcaccacttacacaaaagaagtaattaaaatatagctt
gttttcttgtttatttcattaaaaagtatcaatatgtatacttttcatga
tcatagtcatcagtta
gaattctaagatatgtttaatttctttatttctgccatgattcatttgtc
attcagtagagaaattttcagttcccatgagtttgttggctttctgttgt
ttctgttgttgttgaaatgaaactctaatccatggtggtctgataaaaca
catgggggttacttcagttatcttatatcctttgagacttgctttgtgac
tgagtctgtggtcaattgtggagaagtttccctggtgtgctgagaaaaaa
ggtttattcttttttgtgtgaagtgttctatacattcctgttaggtccat
ctggttcattacatctgttagtttcattatttctctgtttagttttttct
ggatgacctgtccattgatgagtagtattgaagtctcccactattaatac
gtgggttacaatatatgatttaagctttaataatgtttcctttacaagtg
taggtgcttttgcatatgggcatatttgttaaaaattgacacattacctt
agtggattttttactatggtgaatataaactgtccttcctgtctctttta
attagttttggttgaaagactgttttgttagatattgtaatagctataat
aagcttgcttcttatatcgatttgctttaaaattctttttccagctattt
actcttgggtatatctatctgtgatgttgagaaggatgggtcctgttttc
atatcccttctgttcgacttttcttcttattggagaattcaagcctttga
tattgaggaatattaacaaccaatgattgtttatgcctctgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86882313_86883443
seq2: B6Ng01-060G04.b_49_1164 (reverse)

seq1  TAACTGAATGACTAATTGATACATG-AAAGTATACATATTGTATACTTTT  49
      |||||| |||||||  |||| |||| ||||||||||||||| |||| |||
seq2  TAACTG-ATGACTA--TGAT-CATGAAAAGTATACATATTG-ATAC-TTT  44

seq1  TTAATGAAATATAAACAAAGAAAAACAAGCTTATATTTTAAATACTTCTT  99
      ||||||||  ||||||||   ||||||||| |||||||||| ||||||||
seq2  TTAATGAA--ATAAACAA--GAAAACAAGC-TATATTTTAATTACTTCTT  89

seq1  TTGTGTAAGTGGTGAACAACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  149
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTGTGTAAGTGGTGAACAAC-TGTGTGTGTGTGTGTGTGTGTGTGTGTGT  138

seq1  GTGTGTGTGTGGTGTGGTGTGTTTTGAACTCAGAAAACTAGAAAAAGCAA  199
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  GTGTGTGTGT-GTGTGGTGTG-TTTGAACTCAGAAAACTAGAAAAAGCAA  186

seq1  AACTCCAAAATTCCATAAAAGAAAAGAAAATAATACAAAAACCCAATGAT  249
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  AACTCCAAAATTCCAT-AAAGAAAAG-AAATAATACAAAAACCCAATGAT  234

seq1  AACAAAGGATTGTTGTAAATCAAGTTGAACATCAATAAATAGCCTCTCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGATTGTTGTAAATCAAGTTGAACATCAATAAATAGCCTCTCAA  284

seq1  ACCTACTTTATTGTGAGAACACAGTATGTAGTCTCAAGGCTATTGATGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTTATTGTGAGAACACAGTATGTAGTCTCAAGGCTATTGATGCA  334

seq1  GGGCATCTTCATAATGGTTGACCTTGCTTTCTTAGGCATTTCTTTCCTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCTTCATAATGGTTGACCTTGCTTTCTTAGGCATTTCTTTCCTTG  384

seq1  ATACGGAGACTCCTGAACTTTTTGTATTTCATTCTGTTCTTGAAAGTCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGGAGACTCCTGAACTTTTTGTATTTCATTCTGTTCTTGAAAGTCAT  434

seq1  TGAAGGACTACATCAGAAATGTATAGATATGACAGTTGGGGTTGTAGGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGACTACATCAGAAATGTATAGATATGACAGTTGGGGTTGTAGGGA  484

seq1  AAAGGTGGTTACGGTACTAGTCATAATCTTAAAGGGCCTTTTCCCTCCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGGTTACGGTACTAGTCATAATCTTAAAGGGCCTTTTCCCTCCTC  534

seq1  TTTCAGGGGGACTTTTAACTTACCACAAAATAACTGATTTGTGTGACTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGGGGACTTTTAACTTACCACAAAATAACTGATTTGTGTGACTAC  584

seq1  AATCCCTCTGAGGAAATGATCAATGTGAACGGTGTGCTACTGCCATCTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTCTGAGGAAATGATCAATGTGAACGGTGTGCTACTGCCATCTTG  634

seq1  TGTCCGAAAAGAGTCCCTCAGTTTCTGTAGCATGCTAGTTGGAGTGAGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCGAAAAGAGTCCCTCAGTTTCTGTAGCATGCTAGTTGGAGTGAGGA  684

seq1  ATTCAGAAATGTTCTGAAACTAGCCTTCAGGCTTTTGCAGTAGAATGTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAAATGTTCTGAAACTAGCCTTCAGGCTTTTGCAGTAGAATGTAG  734

seq1  GAGGGAGAACTTTAGGCTGTGGGTCTCACGAAGCAGCTGTTAAACCCAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAACTTTAGGCTGTGGGTCTCACGAAGCAGCTGTTAAACCCAGA  784

seq1  ACGCATGACATTCTTGAAGCTGCCAGGGTGTGCATGACTTAACCTGCTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATGACATTCTTGAAGCTGCCAGGGTGTGCATGACTTAACCTGCTCC  834

seq1  CCTCGGACTTTTACTCTGAGATGATACTTTTAAAGTTTCGAGCAAAAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGACTTTTACTCTGAGATGATACTTTTAAAGTTTCGAGCAAAAATT  884

seq1  GGAAGTCAGAGAAAGCAACAGATGAAGGCAAGAGAATAACACTTTATCAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCAGAGAAAGCAACAGATGAAGGCAAGAGAATAACACTTTATCAC  934

seq1  TAGAAACTACATGGAATTTTCAAATGTTAGAGCCATAACATTTTTCTCTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACTACATGGAATTTTCAAATGTTAGAGCCATAACATTTTTCTCTA  984

seq1  AGTCTTAGTGTATTAATCCAATATAGTCAGTCAATGCTTCAAAACTTGGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAGTGTATTAATCCAATATAGTCAGTCAATGCTTCAAAACTTGGG  1034

seq1  GTGCTTGAATTTAGAAAAAAAATCTTAAAGCCATCAACACTTTCAAAATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGAATTTAGAAAAAAAATCTTAAAGCCATCAACACTTTCAAAATC  1084

seq1  CTTTAATTCATTACATTACATCAAAAGAATTC  1131
      ||||||||||||||||||||||||||||||||
seq2  CTTTAATTCATTACATTACATCAAAAGAATTC  1116

seq1: chr8_10585485_10585558
seq2: B6Ng01-060G04.g_837_903 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACACACACACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACACACAGA  50

seq1  G--ATAAAGACTACAAAGCATCATTG  74
      |  ||||| |         |||||||
seq2  GGCATAAACA---------ATCATTG  67