BAC Information

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BAC

Clone NameB6Ng01-060K11
Chromosome8 (Build37)
Map Location 9,835,604 - 9,836,761
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem28
Downstream geneLig4, Abhd13, Tnfsf13b, Myo16, LOC100040008, LOC384782
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060K11.bB6Ng01-060K11.g
ACCDH881567DH881568
length1,131791
definitionDH881567|Mus musculus domesticus DNA, BAC clone: B6Ng01-060K11, 5' end.DH881568|Mus musculus domesticus DNA, BAC clone: B6Ng01-060K11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagcccaggtttcaaaacctgacacaggccaagtttgaaggatc
aagaggcttaaagaaaatcaaagtatagaggagatgagagaagaaatgtt
aaacaagaaaccataggaaaatcctgggaaacaaaaaggcttataaagag
tcttcaagacaacagcataagaattgattttgattttttgaacagactga
aaatgaattttcccagcatgtttgaagacaaaagagtagtcttgtcaata
gtaagaaaaagggaagggaatgaaaacacctgggtgtgcttgaatagaaa
acaaatgattaaaacatgcaaaaatgaacttaaaactgagaggatacttt
aaagaacataatagataagggaacatgtgtgttaataaaatcacatgagg
gagtaagataaaaaaagtatctgaatttttgagactttccagaaatgata
aaattgctggatctctgcttcagtatgagggtctcagttctctgttgact
cagaagagcaacttaactcaagaagtctaacctcggtcctgagtaattcg
gaatgggtctcacagtgcctggaccacgtggttgttgtaggcctagggga
gagtctcttcccttccttatcccagcttctggggaatggccagtcatgag
atcataatttctcctccatcttccatgttggtagcagaggatcttaaaac
cccttactcacacagatcctggttagtggtccagttgattaacccagatg
acctccacattgcaaagtcagcaggtcggcaaccttatctctggccactg
agtttattcttattgtgccacctgacacatccacagattccaagaattga
gaaacagggatgtgcttgggagatcatgagttggcctaactaagacacca
gtcatgccattcagataatgaacaaatcacaaggagatcaaatatcttca
agatacccggcatcttcagaaaaaggtagcacattcagagatgaaaatta
tgtcacacaaatgatgcatctagaattcataccttaaaaaaaaaaactgt
ttccaaatctaataacaagagtatagaaggaaattctcaattactcaaag
cttcattaacttatgctaaaagggaatggtc

gaattcaaagccaagtttggtggctcacacctgtaatataagcacttaga
aggttggaactgtaagacccccaaaactggggagacctccgcttaagtcc
cgggatgagctgcccggtaccccaatgactcgagagaaaaccacacctga
tgcaaactgcaagaggctttattatcagctagctgaggatgaactccttc
cgctgcctgagcagggcagggaagttcgacccagagcggtaacagtaggg
ggcttttaaaggaaaagtgaggaattgggaggagttggaaggagagtttg
gcggaatttggctacagctcttctctagcgggtgtccttggtaaaattac
aaggtgaggagtggggagtgagctgtagctcttctctgtaaaatctctct
ctctatctccatgtccttggcacagggagtcaagcaagggcctggctagg
tcttcccacaatcattgcatctctggctgtaaggctcagaaacaaaaagg
ttttttgctggctatagagaacaaagagcttctttctggctgtattttta
gagatcagggaaaacaagcttgggaaacgtccaggggctttatctttcag
ggagagatgctttaagtcagggtctcacagaaccccagaattgccaaaaa
tgcaaggctaatatgagtttacgatatgatttacagatgagcctggccta
acagagtaagaccttatctcaagacagaaatattgaacgaaggaaggaag
gaaggaaggaaggaacgaaggaaggaggaagttatgtatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_9835604_9836761
seq2: B6Ng01-060K11.b_45_1175 (reverse)

seq1  GACCATTTCCCCTTCTATGCAATAAGTTTAATGAAGCCTTTGGGTAATTG  50
      |||||||  ||||| || || ||||| ||||||||| ||||| |||||||
seq2  GACCATT--CCCTTTTA-GC-ATAAG-TTAATGAAG-CTTTGAGTAATTG  44

seq1  AGAATTTTTCTTTCTATACTCTTGTTTATTATAGATTCTGAAAACAGTTT  100
      ||||  |||| ||||||||||||| ||||  |||||| || ||||||  |
seq2  AGAA--TTTCCTTCTATACTCTTG-TTAT--TAGATT-TGGAAACAG--T  86

seq1  TTTTTTTTTTAAGGTATGGAATTCTAAGATGTCATCATTTTGTGTTGAAC  150
      ||||||||||||||||| ||||||| ||||| ||||| |||||||   ||
seq2  TTTTTTTTTTAAGGTAT-GAATTCT-AGATG-CATCA-TTTGTGT--GAC  130

seq1  ATAAATTTTCATTCTCTGAATGTGCTACCCTTTTTGTCTGGAAGATGCCG  200
      || |||||||| |||||||||||||||||   ||| ||| ||||||||||
seq2  AT-AATTTTCA-TCTCTGAATGTGCTACC---TTTTTCT-GAAGATGCCG  174

seq1  GGTATCTTTGAAGATATTTGATCTCCTTGTGATTTGTTCAATATCTGAAT  250
      |||||| ||||||||||||||||||||||||||||||||| |||||||||
seq2  GGTATC-TTGAAGATATTTGATCTCCTTGTGATTTGTTCATTATCTGAAT  223

seq1  GGCATGACTGGTGTCTTAGTTAGGCCAACTCATGATCTCCCAAGCACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGACTGGTGTCTTAGTTAGGCCAACTCATGATCTCCCAAGCACATC  273

seq1  CCTGTTTCTCAATTCTTGGAATCTGTGGATGTGTCAGGTGGCACAATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTCTCAATTCTTGGAATCTGTGGATGTGTCAGGTGGCACAATAAG  323

seq1  AATAAACTCAGTGGCCAGAGATAAGGTTGCCGACCTGCTGACTTTGCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTCAGTGGCCAGAGATAAGGTTGCCGACCTGCTGACTTTGCAAT  373

seq1  GTGGAGGTCATCTGGGTTAATCAACTGGACCACTAACCAGGATCTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGTCATCTGGGTTAATCAACTGGACCACTAACCAGGATCTGTGTG  423

seq1  AGTAAGGGGTTTTAAGATCCTCTGCTACCAACATGGAAGATGGAGGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGGGTTTTAAGATCCTCTGCTACCAACATGGAAGATGGAGGAGAA  473

seq1  ATTATGATCTCATGACTGGCCATTCCCCAGAAGCTGGGATAAGGAAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGATCTCATGACTGGCCATTCCCCAGAAGCTGGGATAAGGAAGGGA  523

seq1  AGAGACTCTCCCCTAGGCCTACAACAACCACGTGGTCCAGGCACTGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCTCCCCTAGGCCTACAACAACCACGTGGTCCAGGCACTGTGAG  573

seq1  ACCCATTCCGAATTACTCAGGACCGAGGTTAGACTTCTTGAGTTAAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCCGAATTACTCAGGACCGAGGTTAGACTTCTTGAGTTAAGTTG  623

seq1  CTCTTCTGAGTCAACAGAGAACTGAGACCCTCATACTGAAGCAGAGATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGAGTCAACAGAGAACTGAGACCCTCATACTGAAGCAGAGATCC  673

seq1  AGCAATTTTATCATTTCTGGAAAGTCTCAAAAATTCAGATACTTTTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTTTATCATTTCTGGAAAGTCTCAAAAATTCAGATACTTTTTTTA  723

seq1  TCTTACTCCCTCATGTGATTTTATTAACACACATGTTCCCTTATCTATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTCCCTCATGTGATTTTATTAACACACATGTTCCCTTATCTATTA  773

seq1  TGTTCTTTAAAGTATCCTCTCAGTTTTAAGTTCATTTTTGCATGTTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTAAAGTATCCTCTCAGTTTTAAGTTCATTTTTGCATGTTTTAA  823

seq1  TCATTTGTTTTCTATTCAAGCACACCCAGGTGTTTTCATTCCCTTCCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTTTTCTATTCAAGCACACCCAGGTGTTTTCATTCCCTTCCCTT  873

seq1  TTTCTTACTATTGACAAGACTACTCTTTTGTCTTCAAACATGCTGGGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTACTATTGACAAGACTACTCTTTTGTCTTCAAACATGCTGGGAAA  923

seq1  ATTCATTTTCAGTCTGTTCAAAAAATCAAAATCAATTCTTATGCTGTTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTTCAGTCTGTTCAAAAAATCAAAATCAATTCTTATGCTGTTGT  973

seq1  CTTGAAGACTCTTTATAAGCCTTTTTGTTTCCCAGGATTTTCCTATGGTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGACTCTTTATAAGCCTTTTTGTTTCCCAGGATTTTCCTATGGTT  1023

seq1  TCTTGTTTAACATTTCTTCTCTCATCTCCTCTATACTTTGATTTTCTTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTAACATTTCTTCTCTCATCTCCTCTATACTTTGATTTTCTTTA  1073

seq1  AGCCTCTTGATCCTTCAAACTTGGCCTGTGTCAGGTTTTGAAACCTGGGC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTTGATCCTTCAAACTTGGCCTGTGTCAGGTTTTGAAACCTGGGC  1123

seq1  TTGAATTC  1158
      ||||||||
seq2  TTGAATTC  1131


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