BAC Information

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BAC

Clone NameB6Ng01-060L18
Chromosome8 (Build37)
Map Location 115,154,992 - 115,289,215
singlet/doubletdoublet
Overlap geneCntnap4
Upstream geneZfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040
Downstream geneLOC100042061, Mon1b, 4930481F22Rik, Adamts18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060L18.bB6Ng01-060L18.g
ACCDH881627DH881628
length560860
definitionDH881627|Mus musculus domesticus DNA, BAC clone: B6Ng01-060L18, 5' end.DH881628|Mus musculus domesticus DNA, BAC clone: B6Ng01-060L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,154,992 - 115,155,557)(115,288,356 - 115,289,215)
sequence
atttcagttataatttgtggtaactttcatgccttaaatttttttttatt
tgttaaagtgtgtgtgtgtgtgcgcgcgcgcatgtacaagagtgaagatg
tccatggtagccagagatgcaggatccccttggaactggagttacatgca
gctgcaagctgggatgtttggaactggactctggtcctctgtaacactct
taaccaatgagtagtctctccaattttccctttccaacggcatagctgtt
tgtttgtattttccatgtgctgagttagcatttcctatctctcttcattc
tttgttcatgagttccttttggtctttgaccataactgattttaagctgt
agtgaggtaggcttcctgttggcttcctcagagaccatatctcttagttt
ctcctacggttctattgtgttggttacttttgtgtatctgtctcagaagc
acacctgaaatcacaacctgaagggaaagtgttttcaaaccatggtcacg
tggcctcgtgtattcgggcagaactggcggcagctggagtgtggtggtgg
tggtggtgga
gaattctgtgtccccaaaacattcaaggcagaggattccaagtgggcatc
acatctttcctgggatcctttggggattattggcaaaggtatgtttgggg
aagggatgaggtagggtccttaaggcgctccactggcctgattgttaggc
tgccattagcagtgggataaacacatgcttgaaatgtctagctgaaagct
tagtgtccctccccagcatcctgtcactgttggtcaccactgaaaacttt
gattataggacaggggacacttatcactggagccctgtttttatctagat
agaactcagttttgagatggttaattcttcaccagcttatattcaaggtt
aaaaaaaaatccacatgttctgagagatttcccatgaactcttctttgct
gttctccccattcaactgcaagttcaaagcgattgacactccatctaact
cctttaggaagcagaatgcagacaacttacatacttaatccacaagagcg
tgggcttccagctgtatctctgatccccgtgtgtcctctaagctgtctcc
aaatcgtagacgcatgactcctatgtttctccttatatttacctcgaagt
ctttgctttccaaacatctatgtcactgaagttttcattttctaatgtat
tctacactgattgtgagtggatgagtgtgtatgcacgtgcctgtgcccac
gtctgtatgagagcaatcatctacatgccgcatcatgctcacggaggtca
gaaaacctctagcaccaatctctacctgctgtaaagtctcttgttctgca
tggtggcagactctgagctgactagctaactgctgcggattttcccatct
cggcgtccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115154992_115155557
seq2: B6Ng01-060L18.b_48_613

seq1  GAATTCATTTCAGTTATAATTTGTGGTAACTTTCATGCCTTAAATTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCAGTTATAATTTGTGGTAACTTTCATGCCTTAAATTTTTT  50

seq1  TTTATTTGTTAAAGTGTGTGTGTGTGTGCGCGCGCGCATGTACAAGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTTAAAGTGTGTGTGTGTGTGCGCGCGCGCATGTACAAGAGTG  100

seq1  AAGATGTCCATGGTAGCCAGAGATGCAGGATCCCCTTGGAACTGGAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTCCATGGTAGCCAGAGATGCAGGATCCCCTTGGAACTGGAGTTA  150

seq1  CATGCAGCTGCAAGCTGGGATGTTTGGAACTGGACTCTGGTCCTCTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGCTGCAAGCTGGGATGTTTGGAACTGGACTCTGGTCCTCTGTAA  200

seq1  CACTCTTAACCAATGAGTAGTCTCTCCAATTTTCCCTTTCCAACGGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTAACCAATGAGTAGTCTCTCCAATTTTCCCTTTCCAACGGCATA  250

seq1  GCTGTTTGTTTGTATTTTCCATGTGCTGAGTTAGCATTTCCTATCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTGTTTGTATTTTCCATGTGCTGAGTTAGCATTTCCTATCTCTCT  300

seq1  TCATTCTTTGTTCATGAGTTCCTTTTGGTCTTTGACCATAACTGATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTTTGTTCATGAGTTCCTTTTGGTCTTTGACCATAACTGATTTTA  350

seq1  AGCTGTAGTGAGGTAGGCTTCCTGTTGGCTTCCTCAGAGACCATATCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAGTGAGGTAGGCTTCCTGTTGGCTTCCTCAGAGACCATATCTCT  400

seq1  TAGTTTCTCCTACGGTTCTATTGTGTTGGTTACTTTTGTGTATCTGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTCCTACGGTTCTATTGTGTTGGTTACTTTTGTGTATCTGTCTC  450

seq1  AGAAGCACACCTGAAATCACAACCTGAAGGGAAAGTGTTTTCAAACCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCACACCTGAAATCACAACCTGAAGGGAAAGTGTTTTCAAACCATG  500

seq1  GTCACGTGGCCTCGTGTATTCGGGCAGAACTGGCGGCAGCTGGAGTGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACGTGGCCTCGTGTATTCGGGCAGAACTGGCGGCAGCTGGAGTGTGG  550

seq1  TGGTGGTGGTGGTGGA  566
      ||||||||||||||||
seq2  TGGTGGTGGTGGTGGA  566

seq1: chr8_115288356_115289215
seq2: B6Ng01-060L18.g_70_929 (reverse)

seq1  CTGGACGCCGAGATGGGAAAATCCGCAGCAGTTAGCTAGTCAGCTCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACGCCGAGATGGGAAAATCCGCAGCAGTTAGCTAGTCAGCTCAGAG  50

seq1  TCTGCCACCATGCAGAACAAGAGACTTTACAGCAGGTAGAGATTGGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCACCATGCAGAACAAGAGACTTTACAGCAGGTAGAGATTGGTGCT  100

seq1  AGAGGTTTTCTGACCTCCGTGAGCATGATGCGGCATGTAGATGATTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTTTCTGACCTCCGTGAGCATGATGCGGCATGTAGATGATTGCTC  150

seq1  TCATACAGACGTGGGCACAGGCACGTGCATACACACTCATCCACTCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAGACGTGGGCACAGGCACGTGCATACACACTCATCCACTCACAA  200

seq1  TCAGTGTAGAATACATTAGAAAATGAAAACTTCAGTGGCATAGATGTTTG  250
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAGTGTAGAATACATTAGAAAATGAAAACTTCAGTGACATAGATGTTTG  250

seq1  GAAAGCAAAGACTTCGAGGTAAATATAAGGAGAAACATAGGAGTCATGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAAGACTTCGAGGTAAATATAAGGAGAAACATAGGAGTCATGCG  300

seq1  TCTACGATTTGGAGACAGCTTAGAGGACACACGGGGATCAGAGATACAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACGATTTGGAGACAGCTTAGAGGACACACGGGGATCAGAGATACAGC  350

seq1  TGGAAGCCCACGCTCTTGTGGATTAAGTATGTAAGTTGTCTGCATTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCCCACGCTCTTGTGGATTAAGTATGTAAGTTGTCTGCATTCTGC  400

seq1  TTCCTAAAGGAGTTAGATGGAGTGTCAATCGCTTTGAACTTGCAGTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAAGGAGTTAGATGGAGTGTCAATCGCTTTGAACTTGCAGTTGAA  450

seq1  TGGGGAGAACAGCAAAGAAGAGTTCATGGGAAATCTCTCAGAACATGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGAACAGCAAAGAAGAGTTCATGGGAAATCTCTCAGAACATGTGG  500

seq1  ATTTTTTTTTAACCTTGAATATAAGCTGGTGAAGAATTAACCATCTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTAACCTTGAATATAAGCTGGTGAAGAATTAACCATCTCAAA  550

seq1  ACTGAGTTCTATCTAGATAAAAACAGGGCTCCAGTGATAAGTGTCCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTCTATCTAGATAAAAACAGGGCTCCAGTGATAAGTGTCCCCTG  600

seq1  TCCTATAATCAAAGTTTTCAGTGGTGACCAACAGTGACAGGATGCTGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAATCAAAGTTTTCAGTGGTGACCAACAGTGACAGGATGCTGGGG  650

seq1  AGGGACACTAAGCTTTCAGCTAGACATTTCAAGCATGTGTTTATCCCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACACTAAGCTTTCAGCTAGACATTTCAAGCATGTGTTTATCCCACT  700

seq1  GCTAATGGCAGCCTAACAATCAGGCCAGTGGAGCGCCTTAAGGACCCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGGCAGCCTAACAATCAGGCCAGTGGAGCGCCTTAAGGACCCTAC  750

seq1  CTCATCCCTTCCCCAAACATACCTTTGCCAATAATCCCCAAAGGATCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCCTTCCCCAAACATACCTTTGCCAATAATCCCCAAAGGATCCCA  800

seq1  GGAAAGATGTGATGCCCACTTGGAATCCTCTGCCTTGAATGTTTTGGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGATGTGATGCCCACTTGGAATCCTCTGCCTTGAATGTTTTGGGGA  850

seq1  CACAGAATTC  860
      ||||||||||
seq2  CACAGAATTC  860