BAC Information

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BAC

Clone NameB6Ng01-060O19
Chromosome8 (Build37)
Map Location 42,208,062 - 42,209,213
singlet/doubletsinglet
Overlap geneMtus1
Upstream geneFgf20, 2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl
Downstream geneFgl1, Pcm1, Asah1, Frg1, LOC100039376, Gm1815, LOC671994, Zfp353
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060O19.bB6Ng01-060O19.g
ACCDH881755DH881756
length1,137379
definitionDH881755|Mus musculus domesticus DNA, BAC clone: B6Ng01-060O19, 5' end.DH881756|Mus musculus domesticus DNA, BAC clone: B6Ng01-060O19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgctattcccagtaatgaattactggtgctagcacattcgatat
attggcatttaagtgagatcaaagttataagattatgtggacatgtgaaa
gttaggcagcgtaagttaactagtctttaactatttttctattctttaag
cacagaatgtaagaggcaggtgtatttctgagttcgaggccagcctggtc
tacagagtgagttctaggacagccagggctacacagagaaaccctgtctt
gaaaaacaaaaacaaaacaaaaatcaaccaaacaaacaaaagcacagaat
gtaaaacagaatgtttaagcgaggtccatggtgctatttgtagagagaga
ggccttctgacagcagaaggaaagactaacaaaaatcgagaatcctctcc
ttactaagggctctgtggggtcctaagaagctgatcattattcagtactt
agacaccagagaagaaaggatccagtttcagagggcagcaatagggcaga
tcaagcagcctgtcatgctgccctagaaatcagacctcttttgcccccga
cttctctggattgggtggatcctatatcccctgaccgaccaccttaaata
ttcaaaagatgacataatttgggtagaaatttgcccaacgttatgagaga
tggtagagaacagcaggtgacaaacccattgtgtcagaactggaactaca
cattcttcagaagattcacttctcttcccacatgggcatctggagaatat
gggatttgctaatatcaggatcagagatgccaaactcgaagatagcggag
attgtcaagaaaagtaaagtcagccagttaactaattcagtgactaatga
gaagaaccccattaataggtccagaggcataaagcccagagtatactgag
tgacagacttcatataggtaaagctagaaaatttagatataaatatttac
tgatatttatagacacttttcagattggactggaggctttccccactaaa
cataaaactacatccccgtgaaagaagctctaaggattactgtcaaggta
tggaactctccgatgaagggtcaaaaattggaccgtttttggtcccaaac
agtcagagactagcaatatctggcattgattaaaact
tgctgtgaaactgtatgcctctggacttttcacctagtaggctttttttt
ttttttttttctgctcccgtttggttagaatgcttttgttcaatcttttg
cttaacgtggctcctatctttaaaaacaagatgctttcttggagtcagca
tataaatggattttgtttctagatccattcagtcagctggtgtcttttaa
ttcaagaatcaagaccagtatgatttaaacttatcattgaaatgttggtg
ttatcgtgttgttgagtttgggtaattgttgtttgtgtggtattgtgtgt
tttaataattatgactatgtattttttttcgagagactccctgctctggt
ctttcttttcttcaatctgaaatgattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_42208062_42209213
seq2: B6Ng01-060O19.b_50_1186 (reverse)

seq1  AGTTTCTAATCAATGCCCAGAATATTGGCTAGTCTCTGACTTGTTTGGGA  50
      ||||| ||||||||| |||| ||||| ||||||||||||| |||||||||
seq2  AGTTT-TAATCAATG-CCAG-ATATT-GCTAGTCTCTGAC-TGTTTGGGA  45

seq1  CACAAAACTGGTCCATTTTTTGACCCTATCATCTGAGGAAGTCCATACCT  100
      | |||||  |||||| ||||||||||| ||||| || ||  |||||||||
seq2  C-CAAAAACGGTCCAATTTTTGACCCT-TCATCGGA-GAGTTCCATACCT  92

seq1  TGACAGTATATCCTTTAAGAGCTTCTTTGTCACCGTGGATGTAGTTTTAT  150
      |||||||| ||||||  ||||||||||  ||| || ||||||||||||||
seq2  TGACAGTA-ATCCTT--AGAGCTTCTT--TCA-CGGGGATGTAGTTTTAT  136

seq1  GTTTAGTGGGGAAAGCCT-CAGTCCAATCTGAAAAGGTGTCTATAAATAT  199
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  GTTTAGTGGGGAAAGCCTCCAGTCCAATCTGAAAA-GTGTCTATAAATAT  185

seq1  CAGTAAATATTTATATCTAAATTTTTCTAGCTTTACCTATATGAAGTCTG  249
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAGTAAATATTTATATCTAAA-TTTTCTAGCTTTACCTATATGAAGTCTG  234

seq1  TCACTCAGTATACTCTGGGCTTTATGCCTCTGGACCTATTAATGGGGTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAGTATACTCTGGGCTTTATGCCTCTGGACCTATTAATGGGGTTC  284

seq1  TTCTCATTAGTCACTGAATTAGTTAACTGGCTGACTTTACTTTTCTTGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTAGTCACTGAATTAGTTAACTGGCTGACTTTACTTTTCTTGAC  334

seq1  AATCTCCGCTATCTTCGAGTTTGGCATCTCTGATCCTGATATTAGCAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCGCTATCTTCGAGTTTGGCATCTCTGATCCTGATATTAGCAAAT  384

seq1  CCCATATTCTCCAGATGCCCATGTGGGAAGAGAAGTGAATCTTCTGAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTCTCCAGATGCCCATGTGGGAAGAGAAGTGAATCTTCTGAAGA  434

seq1  ATGTGTAGTTCCAGTTCTGACACAATGGGTTTGTCACCTGCTGTTCTCTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAGTTCCAGTTCTGACACAATGGGTTTGTCACCTGCTGTTCTCTA  484

seq1  CCATCTCTCATAACGTTGGGCAAATTTCTACCCAAATTATGTCATCTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTCATAACGTTGGGCAAATTTCTACCCAAATTATGTCATCTTTT  534

seq1  GAATATTTAAGGTGGTCGGTCAGGGGATATAGGATCCACCCAATCCAGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTAAGGTGGTCGGTCAGGGGATATAGGATCCACCCAATCCAGAG  584

seq1  AAGTCGGGGGCAAAAGAGGTCTGATTTCTAGGGCAGCATGACAGGCTGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGGGGGCAAAAGAGGTCTGATTTCTAGGGCAGCATGACAGGCTGCT  634

seq1  TGATCTGCCCTATTGCTGCCCTCTGAAACTGGATCCTTTCTTCTCTGGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGCCCTATTGCTGCCCTCTGAAACTGGATCCTTTCTTCTCTGGTG  684

seq1  TCTAAGTACTGAATAATGATCAGCTTCTTAGGACCCCACAGAGCCCTTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTACTGAATAATGATCAGCTTCTTAGGACCCCACAGAGCCCTTAG  734

seq1  TAAGGAGAGGATTCTCGATTTTTGTTAGTCTTTCCTTCTGCTGTCAGAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGAGGATTCTCGATTTTTGTTAGTCTTTCCTTCTGCTGTCAGAAG  784

seq1  GCCTCTCTCTCTACAAATAGCACCATGGACCTCGCTTAAACATTCTGTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCTCTCTACAAATAGCACCATGGACCTCGCTTAAACATTCTGTTT  834

seq1  TACATTCTGTGCTTTTGTTTGTTTGGTTGATTTTTGTTTTGTTTTTGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCTGTGCTTTTGTTTGTTTGGTTGATTTTTGTTTTGTTTTTGTTT  884

seq1  TTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTAGAACTCACTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTAGAACTCACTCT  934

seq1  GTAGACCAGGCTGGCCTCGAACTCAGAAATACACCTGCCTCTTACATTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGGCCTCGAACTCAGAAATACACCTGCCTCTTACATTCT  984

seq1  GTGCTTAAAGAATAGAAAAATAGTTAAAGACTAGTTAACTTACGCTGCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTAAAGAATAGAAAAATAGTTAAAGACTAGTTAACTTACGCTGCCT  1034

seq1  AACTTTCACATGTCCACATAATCTTATAACTTTGATCTCACTTAAATGCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCACATGTCCACATAATCTTATAACTTTGATCTCACTTAAATGCC  1084

seq1  AATATATCGAATGTGCTAGCACCAGTAATTCATTACTGGGAATAGCAGAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATCGAATGTGCTAGCACCAGTAATTCATTACTGGGAATAGCAGAA  1134

seq1  TTC  1152
      |||
seq2  TTC  1137