BAC Information

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BAC

Clone NameB6Ng01-061A10
Chromosome8 (Build37)
Map Location 23,759,976 - 23,760,176
singlet/doubletsinglet
Overlap genePolb
Upstream geneDefcr17, LOC100041952, Defcr-ps1, AY761184, LOC100040729, Defcr24, LOC100040739, Defb1, Defb50, Defb2, Defb10, Defb9, Defb11, Defb15, Defb35, Defb13, C86695, Ccdc70, Atp7b, Alg11, Nek5, Nek3, Ckap2, Vps36, Rpl30-ps2, Thsd1, Tpte, Slc25a15, LOC547006, Mrps31, AI316807, Slc20a2, LOC100040803, Vdac3, Dkk4
Downstream geneIkbkb, Plat, Ap3m2, Myst3, LOC100042253, Ank1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061A10.bB6Ng01-061A10.g
ACCDH881827DH881828
length2011,236
definitionDH881827|Mus musculus domesticus DNA, BAC clone: B6Ng01-061A10, 5' end.DH881828|Mus musculus domesticus DNA, BAC clone: B6Ng01-061A10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttaaagtgtggttactgtagctgatgaagaagctaagatcttaggtacat
tgagttaggccttgtgggacgtggtgtctgctcctggttctgtgtaaggt
gtcttgtacagtcagtactcgatggaacttagaggtgcaggcgctgccct
ttctactcacctctgacatagcaaagcaaggactggggggggggggggct
a
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagccagc
gtactgttcaacctcccggcagtcggtttcaaggtccgccctatgcggag
tccccgccctgcgtagtgcgtcagcaatgcgcagagagatgcgcagagag
gcagtgcgcagagaggcagtgcgcagactcattcattcccagagaggaac
aaaggaaaatacaacaggcatttccggtctttgaaggagccgagggtggg
cgtgtccacgctccggtagaatacttacaaattaaagaaattgccgagtc
ggtccgtaaatatggaaccaatgctaattttaccttggtgcagttagaca
ggctcgccggcatggcactaactcctgctgactggcaaacggttgtaaaa
gccgctctccctagtatgggcaaatatatggaatggagagcgctttggca
cgaagctgcacaagcgcaggcccgagcaaacgcagctgctttgactccag
agcagagagattggacttttgacttgttaacgggtcagggagcttattct
gctgatcagacaaactaccattggggagcttatgcccagatttcttccac
ggctattagggcctggaaggcgctctctcgagcaggtgaaaccactggtc
agttaacaaagataatccagggacctcaggaatccttctcagattttgtg
gccagaatgacagaggcagcagagcgtatttttggagattcagagcaagc
tgcgcctctgatagaacagctaatctatgagcaagccacaaaggagtgcc
gagcggccatagctccaagaaagaacaaaggcttacaagactggctcagg
gtctgtcgagagcttgggggacctctcagcaatgcagtttagcggctgcc
atcttcaatcccaaaaccgctcatgagcagaaatgatcagaggacatgtt
tactgcgaaagcctggcattttaagaaagatgcagagctcagataacaga
ggactctcactcttgccaatgtgcaagggtatctaagctgacagtccgct
ctgaggataaggcagatctctccccacctgatagataatcactgaagtgt
caaacggtctcggccggttcaggcctagattgaccgttcgactgaagatt
cagaggcacatcggaagaaccactagggacgcggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_23759976_23760176
seq2: B6Ng01-061A10.b_54_254 (reverse)

seq1  TAGCCCCCCCCCCCCCCAGTCCTTGCTTTGCTATGTCAGAGGTGAGTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCCCCCCCCCCCAGTCCTTGCTTTGCTATGTCAGAGGTGAGTAGA  50

seq1  AAGGGCAGCGCCTGCACCTCTAAGTTCCATCGAGTACTGACTGTACAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAGCGCCTGCACCTCTAAGTTCCATCGAGTACTGACTGTACAAGA  100

seq1  CACCTTACACAGAACCAGGAGCAGACACCACGTCCCACAAGGCCTAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTACACAGAACCAGGAGCAGACACCACGTCCCACAAGGCCTAACTC  150

seq1  AATGTACCTAAGATCTTAGCTTCTTCATCAGCTACAGTAACCACACTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACCTAAGATCTTAGCTTCTTCATCAGCTACAGTAACCACACTTTA  200

seq1  A  201
      |
seq2  A  201