BAC Information

Click to search

BAC

Clone NameB6Ng01-062K09
Chromosome8 (Build37)
Map Location 118,414,780 - 118,578,029
singlet/doubletdoublet
Overlap genenone
Upstream geneWwox, Maf
Downstream geneLOC384868, LOC668233, Dynlrb2, Cdyl2, LOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062K09.bB6Ng01-062K09.g
ACCDH882981DH882982
length7441,140
definitionDH882981|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K09, 5' end.DH882982|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,577,286 - 118,578,029)(118,414,780 - 118,415,945)
sequence
gaattcacatgggcatgcccgtaaacaaacctgctaaaaaatctgtttcc
tgcagaaaaactcctctgggctaaagtgttgctgctatgtcagatacctg
gcttgtagggtcagttatgttctgctggaaaaacaaaacaaaccaaccaa
ccaaacaaacaaaaaacccttaaagaatatgtcaggccaatgcttggtaa
aactggcaagagcaggggagaagggcccttgttctggttaatagcatggc
catttgtgtggctgctgttcttcccccgcctgcatgttattcaaatccat
acattgtgtttgccttttgtgtccagcttcaacaagcctccctttgtccc
tatcacaaaggccaataaactctgcgtggaaagtaaggttcagggtctgc
tagacattatgactaattgccaggcagtttatatccttgagaccatgaac
tgatatcgggagacaatggcagagagggagtccattgagcacagagagcc
ccctggtaaccccacgggggctgagatgggcaacaaaggggctattgaga
acggtggcccccgctgaaaactgtgagagaggagagctggtggcctgacc
acgtggctggcctccaatgtggcttttgtttgctggacagtgaaaactgg
cacataacaccagttctgtttatctttggggttgggagattatggaggta
tggttgacaagtttaaagggtggtattcgtggtgtgcagtgtga
gaattcagtaacacaatgagtgtgtatttcaacttctaaattcctacatg
aatagttatcatgccagagtggaatttctagagtgggaggaaatgaagtc
aactatcagtggttcagatgagatgcaggaacgtgttatagacagatcac
atccttgggtactgctaacatggaaagataaatctctccacacaaaccgc
atcttagtagccatctgcagcactacatttcatttctcacatccttataa
atcttcagagccccaataaagtactgacttcctattaccccactaacctc
agaaggttcaggatcattccaaaacaaaaatacaaaaacaaaaaagtcct
ctttattttccaagtgtgctttgtttcattctagaaaactggactgtcaa
catccaacagaactagttaaggggagttttaagaaaattaaaggtgctac
caagtctagacatccttaaaaagaaagtgcatgtggtacatgcatttggt
ccagtcgctttggccaccttcttaatggacaatttggatggctgcacagt
caatctccttaattgcatctgtgttggccattaaaacaaattgaatgcgc
tatggccaatttgatcatgtcataaagaaatggcctattgggcccatcga
gaagcacaattccagccattattcgattatatctgatcaatggagacagc
ctgtatgggaaacccaggagccaaagtagatcatctaggagcccccggct
gactttgctgaccacattattaggatcagctgtcagcagcaactaaattg
gccaggtggttgacagagcatcaccttactctgtcctggggagagaaaag
tctatgcctcatgactttgcccaaaatagccagtcagcaaaccaacaggt
catctatgctacttggagtcctgagtatttgagaaggagaaggaagggaa
aaaaaacactcaaatctcattggctttgacctctactgtgtataaaaata
gatctatgccgcatcatgattaatgctggtaagtaaatagcggggcttat
ttctaatttttcagatctcttggctagtactgtaccttcttgttcctcct
cttcgacgtccaggatctccctaggtgcctggactctcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_118577286_118578029
seq2: B6Ng01-062K09.b_49_792 (reverse)

seq1  TCACACTGCACACCACGAATACCACCCTTTCAACTTGTCAACCATACCTC  50
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCACACTGCACACCACGAATACCACCCTTTAAACTTGTCAACCATACCTC  50

seq1  CATAATCTCCCAACCCCAAAGATAAACAGAACTGGTGTTATGTGCCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCTCCCAACCCCAAAGATAAACAGAACTGGTGTTATGTGCCAGTT  100

seq1  TTCACTGTCCAGCAAACAAAAGCCACATTGGAGGCCAGCCACGTGGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTCCAGCAAACAAAAGCCACATTGGAGGCCAGCCACGTGGTCAG  150

seq1  GCCACCAGCTCTCCTCTCTCACAGTTTTCAGCGGGGGCCACCGTTCTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAGCTCTCCTCTCTCACAGTTTTCAGCGGGGGCCACCGTTCTCAA  200

seq1  TAGCCCCTTTGTTGCCCATCTCAGCCCCCGTGGGGTTACCAGGGGGCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCTTTGTTGCCCATCTCAGCCCCCGTGGGGTTACCAGGGGGCTCT  250

seq1  CTGTGCTCAATGGACTCCCTCTCTGCCATTGTCTCCCGATATCAGTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTCAATGGACTCCCTCTCTGCCATTGTCTCCCGATATCAGTTCAT  300

seq1  GGTCTCAAGGATATAAACTGCCTGGCAATTAGTCATAATGTCTAGCAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCAAGGATATAAACTGCCTGGCAATTAGTCATAATGTCTAGCAGAC  350

seq1  CCTGAACCTTACTTTCCACGCAGAGTTTATTGGCCTTTGTGATAGGGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACCTTACTTTCCACGCAGAGTTTATTGGCCTTTGTGATAGGGACA  400

seq1  AAGGGAGGCTTGTTGAAGCTGGACACAAAAGGCAAACACAATGTATGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGCTTGTTGAAGCTGGACACAAAAGGCAAACACAATGTATGGAT  450

seq1  TTGAATAACATGCAGGCGGGGGAAGAACAGCAGCCACACAAATGGCCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAACATGCAGGCGGGGGAAGAACAGCAGCCACACAAATGGCCATG  500

seq1  CTATTAACCAGAACAAGGGCCCTTCTCCCCTGCTCTTGCCAGTTTTACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAACCAGAACAAGGGCCCTTCTCCCCTGCTCTTGCCAGTTTTACCA  550

seq1  AGCATTGGCCTGACATATTCTTTAAGGGTTTTTTGTTTGTTTGGTTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGCCTGACATATTCTTTAAGGGTTTTTTGTTTGTTTGGTTGGTT  600

seq1  GGTTTGTTTTGTTTTTCCAGCAGAACATAACTGACCCTACAAGCCAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTTTTGTTTTTCCAGCAGAACATAACTGACCCTACAAGCCAGGTA  650

seq1  TCTGACATAGCAGCAACACTTTAGCCCAGAGGAGTTTTTCTGCAGGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACATAGCAGCAACACTTTAGCCCAGAGGAGTTTTTCTGCAGGAAAC  700

seq1  AGATTTTTTAGCAGGTTTGTTTACGGGCATGCCCATGTGAATTC  744
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTAGCAGGTTTGTTTACGGGCATGCCCATGTGAATTC  744

seq1: chr8_118414780_118415945
seq2: B6Ng01-062K09.g_68_1207

seq1  GAATTCAGTAACACAATGAGTGTGTATTTCAACTTCTAAATTCCTACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAACACAATGAGTGTGTATTTCAACTTCTAAATTCCTACATG  50

seq1  AATAGTTATCATGCCAGAGTGGAATTTCTAGAGTGGGAGGAAATGAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTATCATGCCAGAGTGGAATTTCTAGAGTGGGAGGAAATGAAGTC  100

seq1  AACTATCAGTGGTTCAGATGAGATGCAGGAACGTGTTATAGACAGATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCAGTGGTTCAGATGAGATGCAGGAACGTGTTATAGACAGATCAC  150

seq1  ATCCTTGGGTACTGCTAACATGGAAAGATAAATCTCTCCACACAAACCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGGGTACTGCTAACATGGAAAGATAAATCTCTCCACACAAACCGC  200

seq1  ATCTTAGTAGCCATCTGCAGCACTACATTTCATTTCTCACATCCTTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGTAGCCATCTGCAGCACTACATTTCATTTCTCACATCCTTATAA  250

seq1  ATCTTCAGAGCCCCAATAAAGTACTGACTTCCTATTACCCCACTAACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGAGCCCCAATAAAGTACTGACTTCCTATTACCCCACTAACCTC  300

seq1  AGAAGGTTCAGGATCATTCCAAAACAAAAATACAAAAACAAAAAAGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTTCAGGATCATTCCAAAACAAAAATACAAAAACAAAAAAGTCCT  350

seq1  CTTTATTTTCCAAGTGTGCTTTGTTTCATTCTAGAAAACTGGACTGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTTCCAAGTGTGCTTTGTTTCATTCTAGAAAACTGGACTGTCAA  400

seq1  CATCCAACAGAACTAGTTAAGGGGAGTTTTAAGAAAATTAAAGGTGCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAACAGAACTAGTTAAGGGGAGTTTTAAGAAAATTAAAGGTGCTAC  450

seq1  CAAGTCTAGACATCCTTAAAAAGAAAGTGCATGTGGTACATGCATTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTAGACATCCTTAAAAAGAAAGTGCATGTGGTACATGCATTTGGT  500

seq1  CCAGTCGCTTTGGCCACCTTCTTAATGGACAATTTGGATGGCTGCACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCGCTTTGGCCACCTTCTTAATGGACAATTTGGATGGCTGCACAGT  550

seq1  CAATCTCCTTAATTGCATCTGTGTTGGCCATTAAAACAAATTGAATGCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCCTTAATTGCATCTGTGTTGGCCATTAAAACAAATTGAATGCGC  600

seq1  TATGGCCAATTTGATCATGTCATAAAGAAATGGCCTATTGGGCCCATCGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCAATTTGATCATGTCATAAAGAAATGGCCTATTGGGCCCATCGA  650

seq1  GAAGCACAATTCCAGCCATTATTCGATTATATCTGATCAATGGAGACAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACAATTCCAGCCATTATTCGATTATATCTGATCAATGGAGACAGC  700

seq1  CTGTATGGGAAACCCAGGAGCCAAAGTAGATCATCTAGGAGCCCCCGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGGGAAACCCAGGAGCCAAAGTAGATCATCTAGGAGCCCCCGGCT  750

seq1  GACTTTGCTGACCACATTATTAGGATCAGCTGTCAGCAGCAACTAAATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGCTGACCACATTATTAGGATCAGCTGTCAGCAGCAACTAAATTG  800

seq1  GCCAGGTGGTTGACAGAGCATCACCTTACTCTGTCCTGGGGAGAGAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTGGTTGACAGAGCATCACCTTACTCTGTCCTGGGGAGAGAAAAG  850

seq1  TCTATGCCTCATGACTTTGCCCAAAATAGCCAGTCAGCAAACCAACAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCCTCATGACTTTGCCCAAAATAGCCAGTCAGCAAACCAACAGGT  900

seq1  CATCTATGCTACTTGGAGTCCTGAGTAATTTGAGAAGGAGAAGGAAGGGG  950
      |||||||||||||||||||||||||| |||||||||||||||||||||| 
seq2  CATCTATGCTACTTGGAGTCCTGAGT-ATTTGAGAAGGAGAAGGAAGGG-  948

seq1  AAAAAAAAACACTCAAAATCTCCATTGGCTTTGACCTCTACTGTTGTTAT  1000
       ||||||||||||| |||||| ||||||||||||||||||||||   |||
seq2  -AAAAAAAACACTC-AAATCT-CATTGGCTTTGACCTCTACTGT--GTAT  993

seq1  AAAAATAGATCTTATGCCGCATCATGATTAATGCTGGGTAAAGGTAATTT  1050
      ||||||||||| ||||||||||||||||||||||| |||||  |||| | 
seq2  AAAAATAGATC-TATGCCGCATCATGATTAATGCT-GGTAA--GTAAAT-  1038

seq1  AAGCGGGGCCTAATTTTCTTATTTTTCCAGATCTTCTTGCCATGTACTGT  1100
       |||||||| ||  ||||| |||||| |||||| ||||| |  |||||||
seq2  -AGCGGGGCTTA--TTTCTAATTTTT-CAGATC-TCTTGGCTAGTACTGT  1083

seq1  ACCTTTCCTTGTTCCTCCTCCTTTCTGACAGGTCTCAGGATCTCCCTAGG  1150
      |||||  |||||||||||||  ||| |||  ||| |||||||||||||||
seq2  ACCTT--CTTGTTCCTCCTC--TTC-GAC--GTC-CAGGATCTCCCTAGG  1125

seq1  TGGCCTTGACTCTCAC  1166
      | |||| |||||||||
seq2  T-GCCTGGACTCTCAC  1140