BAC Information

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BAC

Clone NameB6Ng01-062K11
Chromosome14 (Build37)8 (Build37)
Map Location 83,112,944 - 83,113,134100,538,921 - 100,539,838
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062K11.bB6Ng01-062K11.g
ACCDH882985DH882986
length519917
definitionDH882985|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K11, 5' end.DH882986|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(83,112,944 - 83,113,134)(100,538,921 - 100,539,838)
sequence
gaattctttctttagctctgtactccatttttaaaattgggttattggtt
ttcctggagtctaacttcttgagttctttgtatagtttggctatcaaccc
tttatcagatgtagggttggtaaagatcttttcccaatccttaggtttct
gttttgtcctattgacagtgtcctttaacttacacaagcttttcagtttc
atgaggtcccatttgtcaattgttgatcttagagcttgagccattggtgt
tctgttcaggaaattttcccttgtgctgatgttttcaaggctctttccac
tttgtcttctaatagattcatcatatctggtattatgtggaggtccttga
tccacttggatttgagctttgtacaaggagataaaaatggattaatttgc
attcttctacatgcagactgccagttagaccagcaccatttgttgaaaat
gctgtcctctttccactgtatagttttggtttctttgtcaaaaatcaagt
gaccataggtgtgtgggtt
gaattctaatcaataggggtaaaacttccaggtcattcacagcgtgattt
ctcatgttttattactgaggtatgtgacacatttagcaataggggtttta
ctgtcaatttctgaggaataaccaacagtcatggcaatagcttgggctgt
gggagaatttaagggaactcactgggcaaacaacttcaaaacattcgctg
acctctgttagtggagttgtattgctagcatttgagtttactaacatgtt
tgtccttccattgtaggataattctattacaactttttacatgtacatct
attaatgaataggtattaataacatatctgcgtctaaagtttggtattta
aagcaatagggcaatgtaaaatcagaggaagacaccgatcacaccggtgc
tgagacctgatgggacagttgtacatctatatttgccttggtagagagat
gataattcatgatccactcttggaactatgcctggttgactgagtatttc
ttggtgacaaattcattttcccaaagaagcatttttattattctgctgtc
tgagaaagtacaatgcactgtttttgttgttgtttattgttgttgtttgt
tttattcaggagaaaatgccatttagaatagcttatcacacattttatta
ataactagcagaaaggatcttgaatgctctaatcactatgcacttaggct
gtggtaacattaatcatttgaatggattgtttctttcttatgcctatatt
gaaattcacaactgagcctcagaaaaatatatagttgtaatgattatttt
ttaaaacagaagtttaaaagatgtaaatgcttaaaatttacaaatggaag
acataacatttgtaaggaggtgtgataagagctttggagagagtagtagt
aaggggaagaattgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83112944_83113134
seq2: B6Ng01-062K11.b_367_560 (reverse)

seq1  AACCCACAGACCTATGGTCACTTAATCTTTGACAAAGGATCTAAAATCAT  50
      |||||||| |||||||||||||| || |||||||||| | | ||||  ||
seq2  AACCCACACACCTATGGTCACTTGATTTTTGACAAAGAAACCAAAACTAT  50

seq1  CCAGTGGAAAAAAGA---CATTTTCAAAAAATGCTGCTGGCACAACTGGG  97
       ||||||||| | ||   ||||||||| ||||| ||||||   |||||| 
seq2  ACAGTGGAAAGAGGACAGCATTTTCAACAAATGGTGCTGGTCTAACTGGC  100

seq1  GGTTAGCATGTAGAAGAATGTGAATTGATCTGTTCGTATCTCCTTGTACA  147
       ||  |||||||||||||||  |||| |||  ||  ||||||||||||||
seq2  AGTCTGCATGTAGAAGAATGCAAATTAATCCATTTTTATCTCCTTGTACA  150

seq1  AAGCTCAAGTCTAAGTGGATCAAGGAACTCCACATAAAACCAGA  191
      |||||||| || |||||||||||||| |||||||||| ||||||
seq2  AAGCTCAAATCCAAGTGGATCAAGGACCTCCACATAATACCAGA  194

seq1: chr8_100538921_100539838
seq2: B6Ng01-062K11.g_68_984

seq1  GAATTCTAATCAATAGGGGTAAAACTTCCAGGTCATTCACAGCGTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATCAATAGGGGTAAAACTTCCAGGTCATTCACAGCGTGATTT  50

seq1  CTCATGTTTTATTACTGAGGTATGTGACACATTTAGCAATAGGGGTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTTTATTACTGAGGTATGTGACACATTTAGCAATAGGGGTTTTA  100

seq1  CTGTCAATTTCTGAGGAATAACCAACAGTCATGGCAATAGCTTGGGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAATTTCTGAGGAATAACCAACAGTCATGGCAATAGCTTGGGCTGT  150

seq1  GGGAGAATTTAAGGGAACTCACTGGGCAAACAACTTCAAAACATTCGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAATTTAAGGGAACTCACTGGGCAAACAACTTCAAAACATTCGCTG  200

seq1  ACCTCTGTTAGTGGAGTTGTATTGCTAGCATTTGAGTTTACTAACATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGTTAGTGGAGTTGTATTGCTAGCATTTGAGTTTACTAACATGTT  250

seq1  TGTCCTTCCATTGTAGGATAATTCTATTACAACTTTTTACATGTACATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTCCATTGTAGGATAATTCTATTACAACTTTTTACATGTACATCT  300

seq1  ATTAATGAATAGGTATTAATAACATATCTGCGTCTAAAGTTTGGTATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGAATAGGTATTAATAACATATCTGCGTCTAAAGTTTGGTATTTA  350

seq1  AAGCAATAGGGCAATGTAAAATCAGAGGAAGACACCGATCACACCGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATAGGGCAATGTAAAATCAGAGGAAGACACCGATCACACCGGTGC  400

seq1  TGAGACCTGATGGGACAGTTGTACATCTATATTTGCCTTGGTAGAGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCTGATGGGACAGTTGTACATCTATATTTGCCTTGGTAGAGAGAT  450

seq1  GATAATTCATGATCCACTCTTGGAACTATGCCTGGTTGACTGAGTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTCATGATCCACTCTTGGAACTATGCCTGGTTGACTGAGTATTTC  500

seq1  TTGGTGACAAATTCATTTTCCCAAAGAAGCATTTTTATTATTCTGCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGACAAATTCATTTTCCCAAAGAAGCATTTTTATTATTCTGCTGTC  550

seq1  TGAGAAAGTACAATGCACTGTTTTTGTTGTTGTTTATTGTTGTTGTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGTACAATGCACTGTTTTTGTTGTTGTTTATTGTTGTTGTTTGT  600

seq1  TTTATTCAGGAGAAAATGCCATTTAGAATAGCTTATCACACATTTTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGGAGAAAATGCCATTTAGAATAGCTTATCACACATTTTATTA  650

seq1  ATAACTAGCAGAAAGGATCTTGAATGCTCTAATCACTATGCACTTAGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAGCAGAAAGGATCTTGAATGCTCTAATCACTATGCACTTAGGCT  700

seq1  GTGGTAACATTAATCATTTGAATGGATTGTTTCTTTCTTATGCCTATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAACATTAATCATTTGAATGGATTGTTTCTTTCTTATGCCTATATT  750

seq1  GAAATTCACAACTGAGCCTCAGAAAAATATATAGTTGTAATGATTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCACAACTGAGCCTCAGAAAAATATATAGTTGTAATGATTATTTT  800

seq1  TTAAAACAGAAGTTTAAAAGATGTAAATGCTTAAAATTTACAAATGGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAGAAGTTTAAAAGATGTAAATGCTTAAAATTTACAAATGGAAG  850

seq1  ACATAACATTTGTAAGGAGGTGTGATAAGAGCTTTGGAGAGAGTAGTAGG  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACATAACATTTGTAAGGAGGTGTGATAAGAGCTTTGGAGAGAGTAGTA-G  899

seq1  TAAGGGGAAGAATTGATA  918
      ||||||||||||||||||
seq2  TAAGGGGAAGAATTGATA  917