BAC Information

Click to search

BAC

Clone NameB6Ng01-062L23
Chromosome8 (Build37)
Map Location 83,694,140 - 83,695,217
singlet/doubletsinglet
Overlap genenone
Upstream geneGypa, Frem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793
Downstream geneLOC236010, LOC384852, Inpp4b, LOC671182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062L23.bB6Ng01-062L23.g
ACCDH883047DH883048
length9971,071
definitionDH883047|Mus musculus domesticus DNA, BAC clone: B6Ng01-062L23, 5' end.DH883048|Mus musculus domesticus DNA, BAC clone: B6Ng01-062L23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttttagagtcatctctagctttcagctgttggataatac
tctgagaatgggctatgctaccaggccccatcaagagaatgttggatttg
tggatgaaaaactctctctctctctctctctctctctctctctctctctc
tctttctctctctctctctctctctctctctctctctcacacacacacac
acacacacactcaccctctttttccctccccttttcgtctttctgtgtcc
gtttgggtgcctgaactgccccggaaagagggaaagaggcccctctatgt
ctgtgtcagcggcggttggtcgggtggactccatatatctatatcctctg
acctttatctagcatgtgaagaaccctatagatatagatagagagacacc
aaggggacgactcatacatcctgacacgcgcgcacgcaaggcgagcacag
tctgcgcgcacggaacatccttgaagactctcttcctacttactgtgtgc
tcatacctcgccacaggaaatccgactagagctgaactctaagtcatgat
gcaaatctctatatatattgtacatatcatctccacaagactctctgtat
ttttggcgagtgcactgcactgtaaacacacacactctctatctcactac
tctcgagctcacacgtgtgagcgcgtccaatgtcgtttgacgctgagaga
tatgctctgcacatacattgcatctctgtatcgatatgcatagaatactc
acacaatcaatcaagtaaagacactgtccgatggtagctgtggaaaattt
aaaactagctgggacctggattatagtacctatgagtagcaccacgctgg
gaatctgtcgcagctgactcgtctagtctcatatggtagacccctcggcg
tatgcattgttcataaaggtgcacggacgaactgtattctcagacacaca
ggaatggtactctatatgctatctaatgaatattggttgatggatgg
gaattcacctaagagtattcaacttcaaactaactcagcataaagacatc
aaaatgctaggaatcaaatagactaggagatcaaagcaaagcaaacagca
gtgtaatttcacatgtaaaagagagccatttgtagtgatgactgatttat
tcaacaaatgaaaataaaatagtcatgagcctctctcccagaaggcaaag
ctaagagaaaaattagttttgttaatgagaatttgaaacaactctatatt
acagaacaaaaccccataaagatgtgactaatacagctaataagattgtt
tatcatatgaagtaaacttcattccacagatactatttacaaaaataatt
accatgccatagtttcatggtggcaaccgaataaatgctaaaaaaaaatt
tttgtttaaaaagaacacaatgtgttgtacattaacagactgaaaactaa
aacagaaaattaacttaaaaaaaaagaagaaacagaaaccacccaagact
gttggaaattaaagggaaagggctttgctaaataactgtagcatgaacag
aaaagaaattaaagtcattattttttaattaaacactggttattaaataa
aaacgggagcaaatgaactcacaactcaaatcaaaatagcagaaaatcct
aggagaagtcaatgactgaaaacattctcttgatgcaggcatttccttca
caaatgttttggctaaggcctattaagctaaagacactggaacacagaga
agttacattttagcaagtgtataaatgtgagtaagtaagcatattagcaa
taattacatagcaatgtttaaaccagagattcaacatcctgaaagaaaaa
tggagttaacttgagggactcatggctagggtaagaagttgttcttttag
atcagaacatagttacaggtatatatgaacaggtaatatttgaaaagaaa
tttgaagaaaaaaagatgagacagcaaatgtctgggggaaaatactacag
aaacacataccactttggtaaatactacaacagagataagctttaaaaaa
agtaaacattcctttgcatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_83694140_83695217
seq2: B6Ng01-062L23.g_66_1136 (reverse)

seq1  ATATGCAAAGGAATGTTTACTTTTTTTTAAAGGCTTTATCTCTGTTTGTA  50
      |||||||||||||||||||| |||||||||||   ||||||||| |||||
seq2  ATATGCAAAGGAATGTTTAC-TTTTTTTAAAG--CTTATCTCTG-TTGTA  46

seq1  GTATTTACCAAAGT-GTATGTGTTTCTGTTAGTATTTTCCCCCAGACATT  99
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  GTATTTACCAAAGTGGTATGTGTTTCTG-TAGTATTTTCCCCCAGACATT  95

seq1  TGCTTGTCTTCATCTTTTTTTTCTTCAAATTTCTTTTCAAATATTACCTG  149
      ||| |||| ||||| |||||||||||||||||||||||||||||||||||
seq2  TGC-TGTC-TCATC-TTTTTTTCTTCAAATTTCTTTTCAAATATTACCTG  142

seq1  TTCATATATACCTGTAACTATGTTCTGATCTAAAAGAACAACTTCTTACC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATATACCTGTAACTATGTTCTGATCTAAAAGAACAACTTCTTACC  192

seq1  CTAGCCCTGAGTCCCTCAAGTTAACTCCATTTTTCTTTCAGGATGTTGAA  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCATGAGTCCCTCAAGTTAACTCCATTTTTCTTTCAGGATGTTGAA  242

seq1  TCTCTGGTTTAAACATTGCTATGTAATTATTGCTAATATGCTTACTTACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTTTAAACATTGCTATGTAATTATTGCTAATATGCTTACTTACT  292

seq1  CACATTTATACACTTGCTAAAATGTAACTTCTCTGTGTTCCAGTGTCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTATACACTTGCTAAAATGTAACTTCTCTGTGTTCCAGTGTCTTT  342

seq1  AGCTTAATAGGCCTTAGCCAAAACATTTGTGAAGGAAATGCCTGCATCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAATAGGCCTTAGCCAAAACATTTGTGAAGGAAATGCCTGCATCAA  392

seq1  GAGAATGTTTTCAGTCATTGACTTCTCCTAGGATTTTCTGCTATTTTGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTTTTCAGTCATTGACTTCTCCTAGGATTTTCTGCTATTTTGAT  442

seq1  TTGAGTTGTGAGTTCATTTGCTCCCGTTTTTATTTAATAACCAGTGTTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTGTGAGTTCATTTGCTCCCGTTTTTATTTAATAACCAGTGTTTA  492

seq1  ATTAAAAAATAATGACTTTAATTTCTTTTCTGTTCATGCTACAGTTATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAATAATGACTTTAATTTCTTTTCTGTTCATGCTACAGTTATTT  542

seq1  AGCAAAGCCCTTTCCCTTTAATTTCCAACAGTCTTGGGTGGTTTCTGTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGCCCTTTCCCTTTAATTTCCAACAGTCTTGGGTGGTTTCTGTTT  592

seq1  CTTCTTTTTTTTTAAGTTAATTTTCTGTTTTAGTTTTCAGTCTGTTAATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTTTTTAAGTTAATTTTCTGTTTTAGTTTTCAGTCTGTTAATG  642

seq1  TACAACACATTGTGTTCTTTTTAAACAAAAATTTTTTTTTAGCATTTATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACACATTGTGTTCTTTTTAAACAAAAATTTTTTTTTAGCATTTATT  692

seq1  CGGTTGCCACCATGAAACTATGGCATGGTAATTATTTTTGTAAATAGTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTGCCACCATGAAACTATGGCATGGTAATTATTTTTGTAAATAGTAT  742

seq1  CTGTGGAATGAAGTTTACTTCATATGATAAACAATCTTATTAGCTGTATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAATGAAGTTTACTTCATATGATAAACAATCTTATTAGCTGTATT  792

seq1  AGTCACATCTTTATGGGGTTTTGTTCTGTAATATAGAGTTGTTTCAAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACATCTTTATGGGGTTTTGTTCTGTAATATAGAGTTGTTTCAAATT  842

seq1  CTCATTAACAAAACTAATTTTTCTCTTAGCTTTGCCTTCTGGGAGAGAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTAACAAAACTAATTTTTCTCTTAGCTTTGCCTTCTGGGAGAGAGG  892

seq1  CTCATGACTATTTTATTTTCATTTGTTGAATAAATCAGTCATCACTACAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGACTATTTTATTTTCATTTGTTGAATAAATCAGTCATCACTACAA  942

seq1  ATGGCTCTCTTTTACATGTGAAATTACACTGCTGTTTGCTTTGCTTTGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCTCTTTTACATGTGAAATTACACTGCTGTTTGCTTTGCTTTGAT  992

seq1  CTCCTAGTCTATTTGATTCCTAGCATTTTGATGTCTTTATGCTGAGTTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGTCTATTTGATTCCTAGCATTTTGATGTCTTTATGCTGAGTTAG  1042

seq1  TTTGAAGTTGAATACTCTTAGGTGAATTC  1078
      |||||||||||||||||||||||||||||
seq2  TTTGAAGTTGAATACTCTTAGGTGAATTC  1071