BAC Information

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BAC

Clone NameB6Ng01-062N14
Chromosome8 (Build37)
Map Location 65,773,889 - 65,774,781
singlet/doubletsinglet
Overlap geneSpock3
Upstream geneLOC384830, LOC100040804, LOC665267
Downstream geneLOC384831, EG244495, Tll1, LOC100040989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062N14.bB6Ng01-062N14.g
ACCDH883115DH883116
length884657
definitionDH883115|Mus musculus domesticus DNA, BAC clone: B6Ng01-062N14, 5' end.DH883116|Mus musculus domesticus DNA, BAC clone: B6Ng01-062N14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaggaagatcacagaaattaattgtccaatagtgtatcataa
gccttgaaaatatacatttaagtaaaatcatatagattgagcatgctatg
tttagaaatataactatatagatatacaaacaaatgtaataataaggaag
gctaagaatttgaaacagagcaagagggatatcaggggagtttagagtag
ggaaaaggattagagaaagaaatgatgtaattatattatgatctcataaa
taattaaatggaagtgaaagctccattatctggaaaagtgattcccaaaa
cattagttagggctcatttcacattcaaagtgtcatatgaccccactcta
ttctctcttgactggtctgtgtgtgtgttgtctgtgtcctaactttgttc
atgaagggatcaaataaactggattagaacccagccattgattgctaaag
cagtttggtatttaatggctctgtgtccagacacgaagacattttaaatt
attagataaagtacatgcactttccaagtataagaggtcaacatttcagc
tgtatgcattccttaagctggaagaacatgctcagagggaaagaacacaa
attaaccagcaataaatcatatcatagtatgtttgtggcttgaaactgag
aactatgttgctccaagacatagtttatatatatatatatatatatatat
atatatatatatatatataaaataatatgtataccttaaaaattgatata
tgttgaaaaaaacatgacctgaaaaataattatatgtgtgttttttgttg
atctctataatgtgtgtacgtcgctgagagatacatagcgataatcgtag
tcaaatagattagcgtgtgagaaaactttgttta

gaattcaaaggaacaccacaggacaaacaatattaactaactgaaccatg
tagagctcccagggtctaagccaacaaccaaagagtgtacttggagggag
ccaggactccagatatatatgtagcagaggatgggagggaacatcaatgg
gaggggagggagactcactgtccccagcatagggggatgctagagaggtg
aggcagaagtacttgaatgggtgaagaagcacccccaatgaggcaaaggg
gagggggagaggggtgtcttcagatgctacaactatgaagtctcacaaac
atgtctacataaccatgagctgaacaaagacagcattaacaggcaaacca
aagtgggtggggaaagccctctaggcatcagtctacaaagaactacaggc
aactaaggagtacaaagtgccagagaaatattctttcgtagggaaaagca
tatgaaaaagtgtaacataaaaacaaaaagactaggtctttattcccagg
cttgagaatgtgacctttgtgatccaatgatccaaggcatgttaataaaa
cagatagtgacattcctcgactcatctacttcctgggttaagggagtgtt
tgttaagaaaaatgacatgtggacactttgctccttctttggaatgggaa
caaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65773889_65774781
seq2: B6Ng01-062N14.b_50_933 (reverse)

seq1  TAAACAAAGTTTTCTCCAAAGTTAAATTTATTTTAACTGATGAATAATAG  50
      ||||||||||||||||  | | | ||| || ||| ||| | | || || |
seq2  TAAACAAAGTTTTCTCACACGCT-AATCTA-TTTGACT-ACG-ATTATCG  46

seq1  CATAGAATTTTTCATAGGACTACAGTACCTTGTACTATTTCAATGAATAT  100
      |   | || | |||  |   ||||  || || ||  |  ||||  || | 
seq2  CTATGTATCTCTCAGCGACGTACA-CACATTATA-GAGATCAA-CAAAAA  93

seq1  ACATAACATATAATTATTTTTCATGTCACTATCTCTTCAACATTTATCAT  150
      |||  |||||||||||||||||| ||||   | | |||||||| ||||| 
seq2  ACA-CACATATAATTATTTTTCAGGTCATGTTTTTTTCAACATATATCAA  142

seq1  TTCTTTAAGGTAAACATACTATTTTATATATATATATATATATATATATA  200
      || ||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  TT-TTTAAGGTATACATATTATTTTATATATATATATATATATATATATA  191

seq1  TATATATATATATATATAAACTATGTCTTGGAGCAACATAGTTCTCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATAAACTATGTCTTGGAGCAACATAGTTCTCAGTT  241

seq1  TCAAGCCACAAACATACTATGATATGATTTATTGCTGGTTAATTTGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCACAAACATACTATGATATGATTTATTGCTGGTTAATTTGTGTT  291

seq1  CTTTCCCTCTGAGCATGTTCTTCCAGCTTAAGGAATGCATACAGCTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTCTGAGCATGTTCTTCCAGCTTAAGGAATGCATACAGCTGAAA  341

seq1  TGTTGACCTCTTATACTTGGAAAGTGCATGTACTTTATCTAATAATTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACCTCTTATACTTGGAAAGTGCATGTACTTTATCTAATAATTTAA  391

seq1  AATGTCTTCGTGTCTGGACACAGAGCCATTAAATACCAAACTGCTTTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTCGTGTCTGGACACAGAGCCATTAAATACCAAACTGCTTTAGC  441

seq1  AATCAATGGCTGGGTTCTAATCCAGTTTATTTGATCCCTTCATGAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGGCTGGGTTCTAATCCAGTTTATTTGATCCCTTCATGAACAAA  491

seq1  GTTAGGACACAGACAACACACACACAGACCAGTCAAGAGAGAATAGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGACACAGACAACACACACACAGACCAGTCAAGAGAGAATAGAGTG  541

seq1  GGGTCATATGACACTTTGAATGTGAAATGAGCCCTAACTAATGTTTTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATATGACACTTTGAATGTGAAATGAGCCCTAACTAATGTTTTGGG  591

seq1  AATCACTTTTCCAGATAATGGAGCTTTCACTTCCATTTAATTATTTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTTTCCAGATAATGGAGCTTTCACTTCCATTTAATTATTTATGA  641

seq1  GATCATAATATAATTACATCATTTCTTTCTCTAATCCTTTTCCCTACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATAATATAATTACATCATTTCTTTCTCTAATCCTTTTCCCTACTCT  691

seq1  AAACTCCCCTGATATCCCTCTTGCTCTGTTTCAAATTCTTAGCCTTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCCCTGATATCCCTCTTGCTCTGTTTCAAATTCTTAGCCTTCCTT  741

seq1  ATTATTACATTTGTTTGTATATCTATATAGTTATATTTCTAAACATAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTACATTTGTTTGTATATCTATATAGTTATATTTCTAAACATAGCA  791

seq1  TGCTCAATCTATATGATTTTACTTAAATGTATATTTTCAAGGCTTATGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAATCTATATGATTTTACTTAAATGTATATTTTCAAGGCTTATGAT  841

seq1  ACACTATTGGACAATTAATTTCTGTGATCTTCCTGAAGAATTC  893
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATTGGACAATTAATTTCTGTGATCTTCCTGAAGAATTC  884


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