BAC Information

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BAC

Clone NameB6Ng01-063D13
Chromosome8 (Build37)
Map Location 8,795,808 - 8,912,696
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039836, Efnb2, 9430010O03Rik
Downstream geneTmem28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063D13.bB6Ng01-063D13.g
ACCDH883381DH883382
length9751,103
definitionDH883381|Mus musculus domesticus DNA, BAC clone: B6Ng01-063D13, 5' end.DH883382|Mus musculus domesticus DNA, BAC clone: B6Ng01-063D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,795,808 - 8,796,790)(8,911,578 - 8,912,696)
sequence
gaattcttgaaaatcaatgagattaagtctaaattctggctgtgggagga
atcgagtaaatgtcaaaggatttgagagaagtaataagtcaaggactatc
caaccacactgggtttagggagagaggaactaaaagaacagtttcacaat
tactctgccagccagggagaagatagcaaggtggaatgtggggcatcgaa
aacaatggctcatccataaggagaaataacgtcacttaaaactggggagg
gggacctgtatgctttgatccaaccgcatggctccgagcctgcaatggag
tacaaaaagcaggcagcaagcatcaggaggtcacttctgtgagttctgtg
accccgaagcttgggtgcacacatttcatatgtgccagtgcatgcaggta
gcttggagcagatgtgggggagaccccaacctctgcagagagaagcagac
gagggttgcctccgcttccacttcatctccactgagaaatgagatgggtg
ccagacaactgccaagtggggattcttggctcttcggtaggtcttagctg
tgtgatgttccttggtactttcgtacaggcttgaagtattttgtaagtag
gtggttcctgagggagtgagtcctgagctggagaaatgggtgcttgggag
aagcctggctttggagcagggtaaagtttgagggtgcttttccttctccc
cactcatctcttcagtcagaatactaagtcgtaggcagaaggactgtggg
taatgagagccactacctaagaagaagatcgaaggttgcacttagttctg
gggaagagggggcctgggtgggggtggagtggcgtggcgtgatcttctca
agcccgaaagctgaggtgctgcctgtgcaacgagcatcagtggatttgca
cttccatttctaaaagacatggattttcaaccccaatctttgttctgact
tcacaagctagaatggcgcttgtgg

gaattcagaccttggcaagtgttggtgagaagagtgctgccaaaagctct
gcccaggacaaaccacactgctgaagtccacatgagtacagaagacggcg
atgatggggcttcaggaagggctacttccttgtacaagtgactgccctta
tttgagaagcatttgtagcaagaattggatggaaataccttggttgtagt
tttcctaaacttcctatccatctccaaaccgttgggcaggtgggtgccct
ccagtagcacagagtgagcaggttccccaaacaaaagaaaggctgaatac
tttaaattcgtttgtaagagtcttcatcgtctgtttcctgaaaatatttc
caaatggtccaaatattgaacctgtcatgggctaaatgtttactgggttt
aattttgcctttatcatggaacatctttgtctttttatctcttcatttgt
aagataggaatataagagtgtttatcttatcgatggtttctggaatttag
tatgctagcataaataaagtgctcctgggggggacccaaacatatagata
taacccagaaagattctactgctcacttctcagagacacagtatttctta
ggaaggagggtaccagctgacacaggggaccttctgctggaattcagaga
acggataccttgaatttgcatatttgattttacctaacatttccaacaag
aaagaataaatattaagttccaacttaaatgtagtacacagttacatttt
aggagaaattatatagatatctgagacttattttatagaccttaaaaaca
tgcagtgattgattgccggacaaaggacagaaaactggatgaagatgata
gcaaaagctaagttaggtgctgatgagagaatttaggtcatcatattcaa
atctacctagaatgccttcatcattactatttctggaagattctactaaa
acaccattagctagggttctctagagaaaaaaactcagaatgaacgcata
cacacagcagcattcattagagaggtctgggttatgtctgactctggacg
tgctttctccctctgataaaaagtgatcatcatagtgtttactccacagc
ttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_8795808_8796790
seq2: B6Ng01-063D13.b_44_1018

seq1  GAATTCTTGAAAATCAATGAGATTAAGTCTAAATTCTGGCTGTGGGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAAAATCAATGAGATTAAGTCTAAATTCTGGCTGTGGGAGGA  50

seq1  ATCGAGTAAATGTCAAAGGATTTGAGAGAAGTAATAAGTCAAGGACTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGTAAATGTCAAAGGATTTGAGAGAAGTAATAAGTCAAGGACTATC  100

seq1  CAACCACACTGGGTTTAGGGAGAGAGGAACTAAAAGAACAGTTTCACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACACTGGGTTTAGGGAGAGAGGAACTAAAAGAACAGTTTCACAAT  150

seq1  TACTCTGCCAGCCAGGGAGAAGATAGCAAGGTGGAATGTGGGGCATCGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGCCAGCCAGGGAGAAGATAGCAAGGTGGAATGTGGGGCATCGAA  200

seq1  AACAATGGCTCATCCATAAGGAGAAATAACGTCACTTAAAACTGGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGGCTCATCCATAAGGAGAAATAACGTCACTTAAAACTGGGGAGG  250

seq1  GGGACCTGTATGCTTTGATCCAACCGCATGGCTCCGAGCCTGCAATGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTGTATGCTTTGATCCAACCGCATGGCTCCGAGCCTGCAATGGAG  300

seq1  TACAAAAAGCAGGCAGCAAGCATCAGGAGGTCACTTCTGTGAGTTCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAAGCAGGCAGCAAGCATCAGGAGGTCACTTCTGTGAGTTCTGTG  350

seq1  ACCCCGAAGCTTGGGTGCACACATTTCATATGTGCCAGTGCATGCAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGAAGCTTGGGTGCACACATTTCATATGTGCCAGTGCATGCAGGTA  400

seq1  GCTTGGAGCAGATGTGGGGGAGACCCCAACCTCTGCAGAGAGAAGCAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAGCAGATGTGGGGGAGACCCCAACCTCTGCAGAGAGAAGCAGAC  450

seq1  GAGGGTTGCCTCCGCTTCCACTTCATCTCCACTGAGAAATGAGATGGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTGCCTCCGCTTCCACTTCATCTCCACTGAGAAATGAGATGGGTG  500

seq1  CCAGACAACTGCCAAGTGGGGATTCTTGGCTCTTCGGTAGGTCTTAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAACTGCCAAGTGGGGATTCTTGGCTCTTCGGTAGGTCTTAGCTG  550

seq1  TGTGATGTTCCTTGGTACTTTCGTACAGGCTTGAAGTATTTTGTAAGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTTCCTTGGTACTTTCGTACAGGCTTGAAGTATTTTGTAAGTAG  600

seq1  GTGGTTCCTGAGGGAGTGAGTCCTGAGCTGGAGAAATGGGTGCTTGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCCTGAGGGAGTGAGTCCTGAGCTGGAGAAATGGGTGCTTGGGAG  650

seq1  AAGCCTGGCTTTGGAGCAGGGTAAAGTTTGAGGGTGCTTTTCCTTCTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGGCTTTGGAGCAGGGTAAAGTTTGAGGGTGCTTTTCCTTCTCCC  700

seq1  CACTCATCTCTTCAGTCAGAATACTAAGTCGTAGGCAGAAGGACTGTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATCTCTTCAGTCAGAATACTAAGTCGTAGGCAGAAGGACTGTGGG  750

seq1  TAATGAGAGCCACTACCTAAGAAGAAGATCGAAGGTTGCACTTAGTTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGAGCCACTACCTAAGAAGAAGATCGAAGGTTGCACTTAGTTCTG  800

seq1  GGGAAGAGGGGGCCTGGGTGGGGGTGGAGTGGCGTGGCGTGGTCTTCTC-  849
      ||||||||||||||||||||||||||||||||||||||||| ||||||| 
seq2  GGGAAGAGGGGGCCTGGGTGGGGGTGGAGTGGCGTGGCGTGATCTTCTCA  850

seq1  AGGCCGATAGCTGAGGTGCTGCCTGTGGAAAGGAGCATCAGTGGATTTGC  899
      || |||| |||||||||||||||||| | || ||||||||||||||||||
seq2  AGCCCGAAAGCTGAGGTGCTGCCTGT-GCAACGAGCATCAGTGGATTTGC  899

seq1  ACTTCCATCTCTAAAAGGACAATGGATTTTCAAAACCCCAAATCTTTGTT  949
      |||||||| ||||||| ||| ||||||||||||   ||| ||||||||||
seq2  ACTTCCATTTCTAAAA-GAC-ATGGATTTTCAA---CCCCAATCTTTGTT  944

seq1  CTGACTTCACAAGGCTAGAAATGGCGTCTTGTGG  983
      |||||||||||| ||||| ||||||| |||||||
seq2  CTGACTTCACAA-GCTAG-AATGGCG-CTTGTGG  975


seq1: chr8_8911578_8912696
seq2: B6Ng01-063D13.g_68_1170 (reverse)

seq1  GAAGCCTTGTGGAGTAAACAACTATTGGATGATTCAACTTTTTATCAGGA  50
      |||||  |||||||||||| |||||  ||||||   ||||||||||| ||
seq2  GAAGC--TGTGGAGTAAAC-ACTAT--GATGAT--CACTTTTTATCA-GA  42

seq1  GGGAGACAGCCACTGTTCCAAGAGTCAGACAGTAACCCAAGAACCTCTCT  100
      |||||| || ||| ||  | ||||||||||| |||||||   ||||||||
seq2  GGGAGAAAG-CAC-GT--CCAGAGTCAGACA-TAACCCA--GACCTCTCT  85

seq1  AATGAATGCTGCTGTGTGTATGCGTTCATTCTGAGTTCTGTTTCTCTAGA  150
      ||||||||||||||||||||||||||||||||||||| | ||||||||||
seq2  AATGAATGCTGCTGTGTGTATGCGTTCATTCTGAGTT-TTTTTCTCTAGA  134

seq1  GAACCCTAGCTAATGGTGTTTTAGTAGAATCTTCCAGAAATAGTAATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTAGCTAATGGTGTTTTAGTAGAATCTTCCAGAAATAGTAATGAT  184

seq1  GAAGGCATTCTAGGTAGATTTGAATATGATGACCTAAATTCTCTCATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCATTCTAGGTAGATTTGAATATGATGACCTAAATTCTCTCATCAG  234

seq1  CACCTAACTTAGCTTTTGCTATCATCTTCATCCAGTTTTCTGTCCTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAACTTAGCTTTTGCTATCATCTTCATCCAGTTTTCTGTCCTTTGT  284

seq1  CCGGCAATCAATCACTGCATGTTTTTAAGGTCTATAAAATAAGTCTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCAATCAATCACTGCATGTTTTTAAGGTCTATAAAATAAGTCTCAGA  334

seq1  TATCTATATAATTTCTCCTAAAATGTAACTGTGTACTACATTTAAGTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATATAATTTCTCCTAAAATGTAACTGTGTACTACATTTAAGTTGG  384

seq1  AACTTAATATTTATTCTTTCTTGTTGGAAATGTTAGGTAAAATCAAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAATATTTATTCTTTCTTGTTGGAAATGTTAGGTAAAATCAAATAT  434

seq1  GCAAATTCAAGGTATCCGTTCTCTGAATTCCAGCAGAAGGTCCCCTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTCAAGGTATCCGTTCTCTGAATTCCAGCAGAAGGTCCCCTGTGT  484

seq1  CAGCTGGTACCCTCCTTCCTAAGAAATACTGAGTCTCTGAGAAGTGAGCA  550
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGCTGGTACCCTCCTTCCTAAGAAATACTGTGTCTCTGAGAAGTGAGCA  534

seq1  GTAGAATCTTTCTGGGTTATATCTATATGTTTGGGTCCCCCCCAGGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATCTTTCTGGGTTATATCTATATGTTTGGGTCCCCCCCAGGAGCA  584

seq1  CTTTATTTATGCTAGCATACTAAATTCCAGAAACCATCGATAAGATAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTATGCTAGCATACTAAATTCCAGAAACCATCGATAAGATAAAC  634

seq1  ACTCTTATATTCCTATCTTACAAATGAAGAGATAAAAAGACAAAGATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTATATTCCTATCTTACAAATGAAGAGATAAAAAGACAAAGATGTT  684

seq1  CCATGATAAAGGCAAAATTAAACCCAGTAAACATTTAGCCCATGACAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATAAAGGCAAAATTAAACCCAGTAAACATTTAGCCCATGACAGGT  734

seq1  TCAATATTTGGACCATTTGGAAATATTTTCAGGAAACAGACGATGAAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATTTGGACCATTTGGAAATATTTTCAGGAAACAGACGATGAAGAC  784

seq1  TCTTACAAACGAATTTAAAGTATTCAGCCTTTCTTTTGTTTGGGGAACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAAACGAATTTAAAGTATTCAGCCTTTCTTTTGTTTGGGGAACCT  834

seq1  GCTCACTCTGTGCTACTGGAGGGCACCCACCTGCCCAACGGTTTGGAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTCTGTGCTACTGGAGGGCACCCACCTGCCCAACGGTTTGGAGAT  884

seq1  GGATAGGAAGTTTAGGAAAACTACAACCAAGGTATTTCCATCCAATTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGAAGTTTAGGAAAACTACAACCAAGGTATTTCCATCCAATTCTT  934

seq1  GCTACAAATGCTTCTCAAATAAGGGCAGTCACTTGTACAAGGAAGTAGCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAATGCTTCTCAAATAAGGGCAGTCACTTGTACAAGGAAGTAGCC  984

seq1  CTTCCTGAAGCCCCATCATCGCCGTCTTCTGTACTCATGTGGACTTCAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGAAGCCCCATCATCGCCGTCTTCTGTACTCATGTGGACTTCAGC  1034

seq1  AGTGTGGTTTGTCCTGGGCAGAGCTTTTGGCAGCACTCTTCTCACCAACA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGTTTGTCCTGGGCAGAGCTTTTGGCAGCACTCTTCTCACCAACA  1084

seq1  CTTGCCAAGGTCTGAATTC  1119
      |||||||||||||||||||
seq2  CTTGCCAAGGTCTGAATTC  1103


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