BAC Information

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BAC

Clone NameB6Ng01-064E13
Chromosome8 (Build37)
Map Location 82,646,068 - 82,780,362
singlet/doubletdoublet
Overlap genenone
Upstream geneD630040G17Rik, 1700011L22Rik, Mmaa, A630049P17, Smad1, LOC666378, LOC666388, LOC666392, Otud4, Tpd52-ps, Abce1, Anapc10, LOC100039439, Hhip, LOC546075
Downstream geneGypa, Frem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064E13.bB6Ng01-064E13.g
ACCDH884115DH884116
length3181,034
definitionDH884115|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E13, 5' end.DH884116|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,646,068 - 82,646,385)(82,779,315 - 82,780,362)
sequence
agtcaccacaccatgccttttattttacatctcagggaggcacagacttg
atagcttggtcttgactttccacttatcttcagtccagcatccagcacat
tgagagatttcagggctttgagctaaagggttgatcgaacagtgtaaaac
ccagtgagaatgtggaagagggtggagggtggtaacacagagatgcgcct
atttacagttaagcagcactgtgggaagataccagaagattggagcgatg
atgcagtgctgtatgctttgcatgtacaagtcctggtttcaatacccagt
gaagggagggagggaagg
gaattcccctacttgtttacatatttaacaaggccaaacatttttcttta
atgctgaagattcttttcaatcttacctttccatttatttttgtaatact
cttactgaatgttacttcaaaattcttaagactaactcaaatcggaataa
ttatatgaaaaaatgaaaatacaacattctctctctctctctctatctct
ctctgatttttgtttaattttttattttttgagaaagagtttctctgtga
agccctggatgtccaggaactcacctctatagaccagactagccttgaac
tctgcctcccaagtgctgggattatagtcatgtgccaccattgcatggct
ctagtatgtttaatcttagtcaatgtgataatctataatggttacaaact
atatttgttaatggaattaactgaaaaaagaaaatcatctttagtgcata
tgtttgtagaatattcaatttctagaacagtaaatagtgaaaatcaagag
ttcaaagattgttcatatcctgcagtatagaatatattgctttactattt
atataacaataataagttaatctagtagtaatttgacattattcttgaaa
gtaggtctctagttttggagctacaggaaagtggatttagatgagctgag
aaaccatataaaagaaaagagatgataatgatttcctagttttagctata
aatctataaagaggtgcttaaataccttactatgagaagctaatggtaag
aaaattctaaagactatttatttatgaatctgagtttccactttactata
aatgcctctttttgttacattaccactattacttacctgaattaaattta
catttagaagattcatagtctaatacattgtttcaactgaatagtagtct
ttcatacatagtcttttttttctacaccattcatcttatggatttgacag
aatcttttcaataatgtattatttatctattcatggtgtgcatgcactta
cacatacttatttattctcttgtatttacttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_82646068_82646385
seq2: B6Ng01-064E13.b_53_370

seq1  AGTCACCACACCATGCCTTTTATTTTACATCTCAGGGAGGCACAGACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCACACCATGCCTTTTATTTTACATCTCAGGGAGGCACAGACTTG  50

seq1  ATAGCTTGGTCTTGACTTTCCACTTATCTTCAGTCCAGCATCCAGCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTGGTCTTGACTTTCCACTTATCTTCAGTCCAGCATCCAGCACAT  100

seq1  TGAGAGATTTCAGGGCTTTGAGCTAAAGGGTTGATCGAACAGTGTAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGATTTCAGGGCTTTGAGCTAAAGGGTTGATCGAACAGTGTAAAAC  150

seq1  CCAGTGAGAATGTGGAAGAGGGTGGAGGGTGGTAACACAGAGATGCGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAGAATGTGGAAGAGGGTGGAGGGTGGTAACACAGAGATGCGCCT  200

seq1  ATTTACAGTTAAGCAGCACTGTGGGAAGATACCAGAAGATTGGAGCGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAGTTAAGCAGCACTGTGGGAAGATACCAGAAGATTGGAGCGATG  250

seq1  ATGCAGTGCTGTATGCTTTGCATGTACAAGTCCTGGTTTCAATACCCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTGCTGTATGCTTTGCATGTACAAGTCCTGGTTTCAATACCCAGT  300

seq1  GAAGGGAGGGAGGGAAGG  318
      ||||||||||||||||||
seq2  GAAGGGAGGGAGGGAAGG  318

seq1: chr8_82779315_82780362
seq2: B6Ng01-064E13.g_68_1101 (reverse)

seq1  TTCAAGTAAATAACAGAGAATAAATAAGTATGTGTTAAGTGCATGCACA-  49
      ||||||||||||  |||||||||||||||||||| |||||||||||||| 
seq2  TTCAAGTAAATACAAGAGAATAAATAAGTATGTG-TAAGTGCATGCACAC  49

seq1  CATGAATAGATAAATAATTAACATTTATTTGAAAAAGAATTCTGTCAAAT  99
      ||||||||||||||||||  |||||   |||||||   ||||||||||||
seq2  CATGAATAGATAAATAAT--ACATT--ATTGAAAA--GATTCTGTCAAAT  93

seq1  CCATTAAGAATGAATGGTGTAGAAAAAAAAAGACTATGTTATGAAAGACT  149
      ||| |||| ||||||||||||| ||||||||||||||| |||||||||||
seq2  CCA-TAAG-ATGAATGGTGTAG-AAAAAAAAGACTATG-TATGAAAGACT  139

seq1  ACTTATTCAGTTGAAACAATGTATTTAGACTATGAATCTTCTAAATGTTA  199
      || |||||||||||||||||||| ||||||||||||||||||||||| ||
seq2  AC-TATTCAGTTGAAACAATGTA-TTAGACTATGAATCTTCTAAATG-TA  186

seq1  AATTTAATTCAGGTAAGTAATAGTGGTAATGTAACAAAAAGAGGCATTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATTCAGGTAAGTAATAGTGGTAATGTAACAAAAAGAGGCATTTA  236

seq1  TAGTAAAGTGGAAACTCAGATTCATAAATAAATAGTCTTTAGAATTTTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAGTGGAAACTCAGATTCATAAATAAATAGTCTTTAGAATTTTCT  286

seq1  TACCATTAGCTTCTCATAGTAAGGTTATTTAAGCACCTCTTTATAGATTT  349
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TACCATTAGCTTCTCATAGTAAGG-TATTTAAGCACCTCTTTATAGATTT  335

seq1  ATAGCTAAAACTAGGAAATCATTATCATCTCTTTTCTTTTATATGGTTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAAAACTAGGAAATCATTATCATCTCTTTTCTTTTATATGGTTTC  385

seq1  TCAGCTCATCTAAATCCACTTTCCTGTAGCTCCAAAACTAGAGACCTACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCATCTAAATCCACTTTCCTGTAGCTCCAAAACTAGAGACCTACT  435

seq1  TTCAAGAATAATGTCAAATTACTACTAGATTAACTTATTATTGTTATATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAATAATGTCAAATTACTACTAGATTAACTTATTATTGTTATATA  485

seq1  AATAGTAAAGCAATATATTCTATACTGCAGGATATGAACAATCTTTGAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAAAGCAATATATTCTATACTGCAGGATATGAACAATCTTTGAAC  535

seq1  TCTTGATTTTCACTATTTACTGTTCTAGAAATTGAATATTCTACAAACAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATTTTCACTATTTACTGTTCTAGAAATTGAATATTCTACAAACAT  585

seq1  ATGCACTAAAGATGATTTTCTTTTTTCAGTTAATTCCATTAACAAATATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTAAAGATGATTTTCTTTTTTCAGTTAATTCCATTAACAAATATA  635

seq1  GTTTGTAACCATTATAGATTATCACATTGACTAAGATTAAACATACTAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAACCATTATAGATTATCACATTGACTAAGATTAAACATACTAGA  685

seq1  GCCATGCAATGGTGGCACATGACTATAATCCCAGCACTTGGGAGGCAGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCAATGGTGGCACATGACTATAATCCCAGCACTTGGGAGGCAGAG  735

seq1  TTCAAGGCTAGTCTGGTCTATAGAGGTGAGTTCCTGGACATCCAGGGCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGCTAGTCTGGTCTATAGAGGTGAGTTCCTGGACATCCAGGGCTT  785

seq1  CACAGAGAAACTCTTTCTCAAAAAATAAAAAATTAAACAAAAATCAGAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAAACTCTTTCTCAAAAAATAAAAAATTAAACAAAAATCAGAGA  835

seq1  GAGATAGAGAGAGAGAGAGAGAATGTTGTATTTTCATTTTTTCATATAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGAGAGAGAGAGAGAGAATGTTGTATTTTCATTTTTTCATATAAT  885

seq1  TATTCCGATTTGAGTTAGTCTTAAGAATTTTGAAGTAACATTCAGTAAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCGATTTGAGTTAGTCTTAAGAATTTTGAAGTAACATTCAGTAAGA  935

seq1  GTATTACAAAAATAAATGGAAAGGTAAGATTGAAAAGAATCTTCAGCATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACAAAAATAAATGGAAAGGTAAGATTGAAAAGAATCTTCAGCATT  985

seq1  AAAGAAAAATGTTTGGCCTTGTTAAATATGTAAACAAGTAGGGGAATTC  1048
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAATGTTTGGCCTTGTTAAATATGTAAACAAGTAGGGGAATTC  1034