BAC Information

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BAC

Clone NameB6Ng01-065I09
Chromosome8 (Build37)
Map Location 118,067,157 - 118,068,136
singlet/doubletsinglet
Overlap genenone
Upstream geneWwox
Downstream geneMaf, LOC384868, LOC668233, Dynlrb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065I09.bB6Ng01-065I09.g
ACCDH884972DH884973
length223978
definitionDH884972|Mus musculus domesticus DNA, BAC clone: B6Ng01-065I09, 5' end.DH884973|Mus musculus domesticus DNA, BAC clone: B6Ng01-065I09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcctggttgtagacacttccctcccatctcttcatccatccacattactt
ccctgtgggctctttcctcaccttctctcattagttcatactttgttatc
acaggatgaagggtccatcctcattgtggtgtttgagtgagaaatttcct
ggaagctcaagtgtttgaatgcttgtttctcagttggtggcactgttagt
caggggtgggggtagggtgggga
gaattcagcctcacagatttccgaaggatagtggagttaggacagaattg
cagccaagcactacggtaagagctttctttaacctatgaaggctgcactc
cagacaagcgctaatcccgatggaatctcactttaaaaataaaaatgaca
tcatggagttgtggacaaagatgtaaccacaagtgtgtccatcacaacat
tgcctttaacagtaaattttaaaaattagatgggaatgcccagagatagg
aggtcacataacataaggctacacttgcctcccaggatgtgaggtcagca
caccaggggacagtacagaatggttgatgtgctgggaaatgagtattatc
tttcaataaagggaagaaagattaattacccccaaaatcaaagagaagaa
aaaggagtagtgtgttcctgctctctttgtaaactcacctttataatagg
gatttgagtttcaatgttaagagcaatgatatctgtcttagcctcttttc
ttgtgtgtgccctgtctatattctcatttcctataatgaaactgtatgga
taatggaacttctgtgggaatattttatctttaaagccattgttcaacaa
attaacaataccgtgaatgctctgatttcgagatcttggtgttgatgtat
agtcaatcacagccatgccaatggagagtttgtcgatgatgaggtgggac
tatgcatcatgggttcccagttctcacggccctcctggaagatacacact
gactatctcacgtggcaagagaacacagtgtctggagaccgggacatgtt
ttagaaccctaaggaaacactctaacttcattaaaaaccagaagaaaaca
ctcactacagtgcacactggaggggtgctcctattaataccaagacagtc
ataaaggagagtttactaatttttttaggagagagctgacaaaggaggaa
tgctcccatccacagagggttgtgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_118067157_118068136
seq2: B6Ng01-065I09.g_71_1047 (reverse)

seq1  CCTCAC-AGCCTCTGTGGATGGGAGCCATTTCTTCCTTTGTCAGCTCTCT  49
      |||||| | |||||||||||||||||   ||| |||||||||||||||||
seq2  CCTCACAACCCTCTGTGGATGGGAGC--ATTCCTCCTTTGTCAGCTCTCT  48

seq1  CCTTAAAAAAATTAGTAAACTCTCCTTTATGACTGTCTTGGTATTAATAG  99
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CC-TAAAAAAATTAGTAAACTCTCCTTTATGACTGTCTTGGTATTAATAG  97

seq1  GAGCACCCCTCCAGTGTGCACTGTAGTGAGTGTTTTCTTTCTGGTTTTTA  149
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAGCACCCCTCCAGTGTGCACTGTAGTGAGTGTTTTC-TTCTGGTTTTTA  146

seq1  ATGAAGTTAGAGTGTTTCCTTAGGGTTCTAAAACATGTCCCGGTCTCCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTAGAGTGTTTCCTTAGGGTTCTAAAACATGTCCCGGTCTCCAG  196

seq1  ACACTGTGTTCTCTTGCCACGTGAGATAGTCAGTGTGTATCTTCCAGGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGTTCTCTTGCCACGTGAGATAGTCAGTGTGTATCTTCCAGGAG  246

seq1  GGCCGTGAGAACTGGGAACCCATGATGCATAGTCCCACCTCATCATCGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGTGAGAACTGGGAACCCATGATGCATAGTCCCACCTCATCATCGAC  296

seq1  AAACTCTCCATTGGCATGGCTGTGATTGACTATACATCAACACCAAGATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTCCATTGGCATGGCTGTGATTGACTATACATCAACACCAAGATC  346

seq1  TCGAAATCAGAGCATTCACGGTATTGTTAATTTGTTGAACAATGGCTTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAATCAGAGCATTCACGGTATTGTTAATTTGTTGAACAATGGCTTTA  396

seq1  AAGATAAAATATTCCCACAGAAGTTCCATTATCCATACAGTTTCATTATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAAATATTCCCACAGAAGTTCCATTATCCATACAGTTTCATTATA  446

seq1  GGAAATGAGAATATAGACAGGGCACACACAAGAAAAGAGGCTAAGACAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAGAATATAGACAGGGCACACACAAGAAAAGAGGCTAAGACAGA  496

seq1  TATCATTGCTCTTAACATTGAAACTCAAATCCCTATTATAAAGGTGAGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTGCTCTTAACATTGAAACTCAAATCCCTATTATAAAGGTGAGTT  546

seq1  TACAAAGAGAGCAGGAACACACTACTCCTTTTTCTTCTCTTTGATTTTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGAGAGCAGGAACACACTACTCCTTTTTCTTCTCTTTGATTTTGG  596

seq1  GGGTAATTAATCTTTCTTCCCTTTATTGAAAGATAATACTCATTTCCCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATTAATCTTTCTTCCCTTTATTGAAAGATAATACTCATTTCCCAG  646

seq1  CACATCAACCATTCTGTACTGTCCCCTGGTGTGCTGACCTCACATCCTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAACCATTCTGTACTGTCCCCTGGTGTGCTGACCTCACATCCTGG  696

seq1  GAGGCAAGTGTAGCCTTATGTTATGTGACCTCCTATCTCTGGGCATTCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAGTGTAGCCTTATGTTATGTGACCTCCTATCTCTGGGCATTCCC  746

seq1  ATCTAATTTTTAAAATTTACTGTTAAAGGCAATGTTGTGATGGACACACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTTTTAAAATTTACTGTTAAAGGCAATGTTGTGATGGACACACT  796

seq1  TGTGGTTACATCTTTGTCCACAACTCCATGATGTCATTTTTATTTTTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTACATCTTTGTCCACAACTCCATGATGTCATTTTTATTTTTAAA  846

seq1  GTGAGATTCCATCGGGATTAGCGCTTGTCTGGAGTGCAGCCTTCATAGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATTCCATCGGGATTAGCGCTTGTCTGGAGTGCAGCCTTCATAGGT  896

seq1  TAAAGAAAGCTCTTACCGTAGTGCTTGGCTGCAATTCTGTCCTAACTCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAGCTCTTACCGTAGTGCTTGGCTGCAATTCTGTCCTAACTCCA  946

seq1  CTATCCTTCGGAAATCTGTGAGGCTGAATTC  980
      |||||||||||||||||||||||||||||||
seq2  CTATCCTTCGGAAATCTGTGAGGCTGAATTC  977