BAC Information

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BAC

Clone NameB6Ng01-065M04
Chromosome8 (Build37)
Map Location 25,700,791 - 25,835,680
singlet/doubletdoublet
Overlap geneIndo, Adam18, Adam3
Upstream geneLOC100040931, Zmat4, 1810011O10Rik, Indol1
Downstream geneAdam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065M04.bB6Ng01-065M04.g
ACCDH885143DH885144
length1,1581,138
definitionDH885143|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M04, 5' end.DH885144|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,834,510 - 25,835,680)(25,700,791 - 25,701,943)
sequence
gaattcctacatagccattttgaaattctgtttatgcctaatttagtgtg
ataaagattgttgatctgaggcagggcaaaggtctcggttttcttggact
tcccaagaggagtgtgaacattgcccaactgttttatgtaagactcaaat
gctttagcttctggtctccacactgccatgcatagcttacacggccacta
gttatatattcttataggcgagactatactaaaatttatggtgcatcatg
attttttaaactggtaccataaatccctccaagcccataaatgcacgcgt
tttaaatccttcggaaagcagaacagtaaagcataaattataaaaatcat
tctaaagaccaaaaagagatgcgtattaaagtaagtgtccatctgcatac
gttctgagatactcattttaaccaactgaacttttagtcacatacatttt
ttttaatgactcgatatggcaatattgtctttcttcttctacagtgttac
ctcataggtgtataaaacttctgaccagcagagagcctcaagttttctca
gagccatttccataggatgtccgcaaagtggttcggaatgtttttagttc
ttcccaagtcagacaagtgtttcctacaaaagtcagcacactgacatcaa
tcatcgtctcatgctgccctaaatcatctgcttacagtctccctgctttt
gtattcttagacgttttaattcaatatataacatggacgatagcctgcat
agttttaaaactagcctcttgggatttgacaatagataatattcaatcca
caaggaaataatatttcacaccccaaaccattgacgtggcatttaagtga
tgtttctgtttagtctttgaaatttttcttacatgtatatgacattatct
tgatcataccccactcctttccttttgtagcttccttgcaggcccccccc
caatgtcctccatgttcttaggttgatttctttaacacattttatctgtt
ttctttattctcacagttgtgacatgcacgtgcctgatttccaactgtcc
tgtaggtttcatcaaacgtatctgcaggctgctcatttcctcggcataga
aaactggcatcatgaaaattgcttccagttgtatctttgattacaggagt
aaaacatg
gaattccacattcaatgcttgtgctggcgaatgtttgtttacgagacaca
agctagagttgtttttagaagaggggacatcattagagaagatgccaccc
tcagactggcctgtgggcaagccgtacttggctgatgattgatgggagag
gggccagctcagtggaggtggtgcccgtattccaattggcacattcagtt
gtctgaataagccatagagagaacagagagcaagcatgtaagcagggttc
ccccaaggcttctgctccagttcctgttactacgttccctctgagttact
gctctggctttcctggatgacgaacttacaaccaaggtgaaataaaaccc
tttctttcccaagttgctctcagtctggctgttctatcacagcaatagaa
accatagcgatgacaatggcttttattgatctgaaatccaatttgccagg
tgttgtggtgcacactcagcatcctagagagcaggagactgatgcagagg
acagacaagctcaaggtcactttggggtatgtggtaagatattgtcaaaa
gccagacaaataaaacaaaacacaaacaaaatagtaataaccctcctcat
atcccaactaacattttaatacaaaccaactaaaaatttaaaaaccataa
tatattatcgttctctgtgggcctgatgtggagggcacgtgttcatggcg
cacatgtagaggtcagagggaaattttgtggagtcaattcttcactttta
cttgcgtccagggggttaaacgtaggttgacaatgttgtgctgcaagttc
gttggcctgctgagccaccttgctagaccctaaccccatacaacaatcga
gagtgtattttctgggtgcagaggaaggaataggtgaaaagaagcatgga
gtattttctggagtgactgacccactcctgttgctagctttgggcgtggc
tttatgagtctgcccactccagagtgcacacgaatgctcttggatttccc
tataacgccaaggtgctcctctcagctcacgggtataacgtgcgaagttt
agaaccaacgaatctttaccaacaacaagcaacaataccaacaaacgagt
ctgcgttgcgatagtatagaaataaatcgcccagctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25834510_25835680
seq2: B6Ng01-065M04.b_43_1200 (reverse)

seq1  CATGTTTTACTCCTGTAAATCAAAGGATAAACAACTGGAAAGCAAATTTC  50
      |||||||||||||||| ||||||||   | |||||||| |||||| ||||
seq2  CATGTTTTACTCCTGT-AATCAAAG---ATACAACTGG-AAGCAATTTTC  45

seq1  ATGATGCCAGTTTCTATAGCCCGAGAAAATGAAGCAGCATGCAGATACGT  100
      ||||||||||||| | ||  ||||| ||||| |||||| |||||||||||
seq2  ATGATGCCAGTTT-TCTATGCCGAGGAAATG-AGCAGCCTGCAGATACGT  93

seq1  TGTGATGAAACCTACAGGACAGGTGTGAATCAGGCACGTGCATGTCACAA  150
      | |||||||||||||||||||| ||  ||||||||||||||||||||| |
seq2  T-TGATGAAACCTACAGGACAGTTGGAAATCAGGCACGTGCATGTCAC-A  141

seq1  ACTGGTGAGAATAAAGAATACAGATAAAATGTGTTTAAAGAAAATCAACC  200
      ||| |||||||||||||| |||||||||||||| |||||| |||||||||
seq2  ACT-GTGAGAATAAAGAAAACAGATAAAATGTG-TTAAAG-AAATCAACC  188

seq1  TAAGAACATGGAGGACATTGGGGGGGGGGCCTGCAAGGAAGCTACAAAAG  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAAGAACATGGAGGACATT-GGGGGGGGGCCTGCAAGGAAGCTACAAAAG  237

seq1  GAAAGGAGTGGGGTATGATCAAGAT-ATGTCATATACATGTAAGAAAAAT  299
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAAAGGAGTGGGGTATGATCAAGATAATGTCATATACATGTAAGAAAAAT  287

seq1  TTCAAAGACTAAACAGAAACATCACTTAAAATGCCACGTCCATGGTTTGG  349
      ||||||||||||||||||||||||||| |||||||||||| |||||||||
seq2  TTCAAAGACTAAACAGAAACATCACTT-AAATGCCACGTCAATGGTTTGG  336

seq1  GGTGTGAAATATTATTTCCTTGTGGATTGAATATTATCTATTGTCAAATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAAATATTATTTCCTTGTGGATTGAATATTATCTATTGTCAAATC  386

seq1  CCAAGAGGCTAGTTTTAAAACTATGCAGGCTATCGTCCATGTTATATATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGGCTAGTTTTAAAACTATGCAGGCTATCGTCCATGTTATATATT  436

seq1  GAATTAAAACGTCTAAGAATACAAAAGCAGGGAGACTGTAAGCAGATGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAAACGTCTAAGAATACAAAAGCAGGGAGACTGTAAGCAGATGAT  486

seq1  TTAGGGCAGCATGAGACGATGATTGATGTCAGTGTGCTGACTTTTGTAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCAGCATGAGACGATGATTGATGTCAGTGTGCTGACTTTTGTAGG  536

seq1  AAACACTTGTCTGACTTGGGAAGAACTAAAAACATTCCGAACCACTTTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTGTCTGACTTGGGAAGAACTAAAAACATTCCGAACCACTTTGC  586

seq1  GGACATCCTATGGAAATGGCTCTGAGAAAACTTGAGGCTCTCTGCTGGTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCCTATGGAAATGGCTCTGAGAAAACTTGAGGCTCTCTGCTGGTC  636

seq1  AGAAGTTTTATACACCTATGAGGTAACACTGTAGAAGAAGAAAGACAATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTTATACACCTATGAGGTAACACTGTAGAAGAAGAAAGACAATA  686

seq1  TTGCCATATCGAGTCATTAAAAAAAATGTATGTGACTAAAAGTTCAGTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATATCGAGTCATTAAAAAAAATGTATGTGACTAAAAGTTCAGTTG  736

seq1  GTTAAAATGAGTATCTCAGAACGTATGCAGATGGACACTTACTTTAATAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAATGAGTATCTCAGAACGTATGCAGATGGACACTTACTTTAATAC  786

seq1  GCATCTCTTTTTGGTCTTTAGAATGATTTTTATAATTTATGCTTTACTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTTTTTGGTCTTTAGAATGATTTTTATAATTTATGCTTTACTGT  836

seq1  TCTGCTTTCCGAAGGATTTAAAACGCGTGCATTTATGGGCTTGGAGGGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTCCGAAGGATTTAAAACGCGTGCATTTATGGGCTTGGAGGGAT  886

seq1  TTATGGTACCAGTTTAAAAAATCATGATGCACCATAAATTTTAGTATAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTACCAGTTTAAAAAATCATGATGCACCATAAATTTTAGTATAGT  936

seq1  CTCGCCTATAAGAATATATAACTAGTGGCCGTGTAAGCTATGCATGGCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCTATAAGAATATATAACTAGTGGCCGTGTAAGCTATGCATGGCAG  986

seq1  TGTGGAGACCAGAAGCTAAAGCATTTGAGTCTTACATAAAACAGTTGGGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGACCAGAAGCTAAAGCATTTGAGTCTTACATAAAACAGTTGGGC  1036

seq1  AATGTTCACACTCCTCTTGGGAAGTCCAAGAAAACCGAGACCTTTGCCCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCACACTCCTCTTGGGAAGTCCAAGAAAACCGAGACCTTTGCCCT  1086

seq1  GCCTCAGATCAACAATCTTTATCACACTAAATTAGGCATAAACAGAATTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGATCAACAATCTTTATCACACTAAATTAGGCATAAACAGAATTT  1136

seq1  CAAAATGGCTATGTAGGAATTC  1171
      ||||||||||||||||||||||
seq2  CAAAATGGCTATGTAGGAATTC  1158

seq1: chr8_25700791_25701943
seq2: B6Ng01-065M04.g_70_1207

seq1  GAATTCCACATTCAATGCTTGTGCTGGCGAATGTTTGTTTACGAGACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATTCAATGCTTGTGCTGGCGAATGTTTGTTTACGAGACACA  50

seq1  AGCTAGAGTTGTTTTTAGAAGAGGGGACATCATTAGAGAAGATGCCACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGTTGTTTTTAGAAGAGGGGACATCATTAGAGAAGATGCCACCC  100

seq1  TCAGACTGGCCTGTGGGCAAGCCGTACTTGGCTGATGATTGATGGGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTGGCCTGTGGGCAAGCCGTACTTGGCTGATGATTGATGGGAGAG  150

seq1  GGGCCAGCTCAGTGGAGGTGGTGCCCGTATTCCAATTGGCACATTCAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGCTCAGTGGAGGTGGTGCCCGTATTCCAATTGGCACATTCAGTT  200

seq1  GTCTGAATAAGCCATAGAGAGAACAGAGAGCAAGCATGTAAGCAGGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAATAAGCCATAGAGAGAACAGAGAGCAAGCATGTAAGCAGGGTTC  250

seq1  CCCCAAGGCTTCTGCTCCAGTTCCTGTTACTACGTTCCCTCTGAGTTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGGCTTCTGCTCCAGTTCCTGTTACTACGTTCCCTCTGAGTTACT  300

seq1  GCTCTGGCTTTCCTGGATGACGAACTTACAACCAAGGTGAAATAAAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGCTTTCCTGGATGACGAACTTACAACCAAGGTGAAATAAAACCC  350

seq1  TTTCTTTCCCAAGTTGCTCTCAGTCTGGCTGTTCTATCACAGCAATAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCCAAGTTGCTCTCAGTCTGGCTGTTCTATCACAGCAATAGAA  400

seq1  ACCATAGCGATGACAATGGCTTTTATTGATCTGAAATCCAATTTGCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGCGATGACAATGGCTTTTATTGATCTGAAATCCAATTTGCCAGG  450

seq1  TGTTGTGGTGCACACTCAGCATCCTAGAGAGCAGGAGACTGATGCAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGTGCACACTCAGCATCCTAGAGAGCAGGAGACTGATGCAGAGG  500

seq1  ACAGACAAGCTCAAGGTCACTTTGGGGTATGTGGTAAGATATTGTCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAGCTCAAGGTCACTTTGGGGTATGTGGTAAGATATTGTCAAAA  550

seq1  GCCAGACAAATAAAACAAAACACAAACAAAATAGTAATAACCCTCCTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACAAATAAAACAAAACACAAACAAAATAGTAATAACCCTCCTCAT  600

seq1  ATCCCAACTAACATTTTAATACAAACCAACTAAAAATTTAAAAACCATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAACTAACATTTTAATACAAACCAACTAAAAATTTAAAAACCATAA  650

seq1  TATATTATCGTTCTCTGTGGGCCTGATGTGGAGGGCACGTGTTTCATGGC  700
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TATATTATCGTTCTCTGTGGGCCTGATGTGGAGGGCACGTG-TTCATGGC  699

seq1  GCACATGTAGAGGTCAGAGGGAAATTTTGTGGAGTCAATTCTTCACTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGTAGAGGTCAGAGGGAAATTTTGTGGAGTCAATTCTTCACTTTT  749

seq1  ACTTGCGTCCAGGGGGTTAAACGTAGGTTGACAATGTTGTGCTGCAAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCGTCCAGGGGGTTAAACGTAGGTTGACAATGTTGTGCTGCAAGTT  799

seq1  CGTTGGCCTGCTGAGCCACCTTGCTAGACCCTAACCCAATAACAACAATC  850
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  CGTTGGCCTGCTGAGCCACCTTGCTAGACCCTAACCCCAT-ACAACAATC  848

seq1  GAGAGTGTATTTTCTGGGTGCAGAGGAAGGAATAGGATGAAAAGAAGCAT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAGAGTGTATTTTCTGGGTGCAGAGGAAGGAATAGG-TGAAAAGAAGCAT  897

seq1  GGAAGTATTTTCTGGAGTGACTGACACACTCCTGTTGCTAGCTTTGGGCG  950
      || |||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  GG-AGTATTTTCTGGAGTGACTGACCCACTCCTGTTGCTAGCTTTGGGC-  945

seq1  GTGGCTTTATGAAGTCTGCACACTCCAGAGTGCACACGAAGGCTCTCTGG  1000
      ||||||||||| ||||||| |||||||||||||||||||| ||||| |||
seq2  GTGGCTTTATG-AGTCTGCCCACTCCAGAGTGCACACGAATGCTCT-TGG  993

seq1  ATTTTCCCATATACGCCCAGGTGCTCCTCTCAAGCTCACGGGTAATACGT  1050
      |||| || ||| ||||| ||||||||||||| ||||||||||||  ||||
seq2  ATTTCCCTATA-ACGCCAAGGTGCTCCTCTC-AGCTCACGGGTATAACGT  1041

seq1  TCGTAGTTATAGACACAACG-ATCTATAACCAACAAACAAGCAAACCATA  1099
       || |||| ||||  ||||| |||| | |||||| |||||||||  ||  
seq2  GCGAAGTT-TAGAACCAACGAATCT-TTACCAAC-AACAAGCAA--CAAT  1086

seq1  ACCAACAACAGAAGCTGCGTTGCCAAAAGTTAAGGAATAAATTCGCCCAG  1149
      ||||||||  ||  |||||||| | | |||  || |||||| ||||||||
seq2  ACCAACAAACGAGTCTGCGTTG-CGATAGTATAGAAATAAA-TCGCCCAG  1134

seq1  CTAA  1153
      ||||
seq2  CTAA  1138