BAC Information

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BAC

Clone NameB6Ng01-066C07
Chromosome8 (Build37)
Map Location 68,607,426 - 68,742,269
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneLOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066C07.bB6Ng01-066C07.g
ACCDH885403DH885404
length1,0961,079
definitionDH885403|Mus musculus domesticus DNA, BAC clone: B6Ng01-066C07, 5' end.DH885404|Mus musculus domesticus DNA, BAC clone: B6Ng01-066C07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,741,143 - 68,742,269)(68,607,426 - 68,608,526)
sequence
gaattcactgtggtcttattttactgcatactcatttttaaaatgtctct
tatttagttattgtaaattagccaatattctattttataattttaccttc
cttcttatttttctttaaaaagtagagactttttcatcaggtaagcatgt
taaaaattataaaacataataatttataaaattataaaaataaacaagga
gctaaattttacttttgaagattgtagcttctcaattattgttaaccaaa
ttctcaactccagaatctatggagaacatgtaacagtaattctgtgacgc
ttctgcaattacaaacacactggatgggggaaccatgaagctttactctt
ggagtactgacagagtaacaacaaaattactcacattaatacagcagtta
cttaactttataattatgtttatattatactttatatataaaaattatat
atatgtatatattatataactttatagttatacttaaaattctaaaaata
tatgattttggtagtgtcaattggatatttaaaccatacatacatcaagt
ttcaatcataattttagtaccttcaaatatatattaacacgtaagacctg
ttaaatagatttcatctgacacagttacaggtaatcagattctagtaatt
ttgtgcttgatgctcaaagtcagccaatcaggaagtgggcagaggaagaa
ggatgcaagaacatggttataagaggatccagataagctgagtttaagcc
caggagaacataatggcacccaagccattcttgatgattctggctttgaa
aatgttgctgcacgtcagaaatgaagtgcatgagtattgagtctagaaat
caggagagttccagggaagcaggatttaccaaatgggtgtggtccctccg
ccacagccagtgataacatgcttgagagagtagtgggagcactcacttct
acatcagagactctgtaccagtgtcgtgtaccagaaacacacgtgatgga
attcagaaaccagttagacccagcatattttaagtacccacagcatgaga
aatttatgattaagaaacgtattttcagaatctctgattccagtga
gaattcactaattgtatattcaaattgagctaaagaatatttgacacgat
ctatttaatggaatgagctggaaaggtaggaagaattgatcagtaagtat
gaccaagcatgtgatattgtcactgataataactaagttataatgcaact
ctaaggagattgaccatgaatggacaatgaaagctgaacaagaaacttat
aagtaatagtgttggaacatttccaggaataacctggaaaattatattta
tataaaatgtactatatataattgtatataaatgatatataatttatatg
taacatataaattataatttatatgtaatgtatatgatatataattaatg
tatataaaattatatatataattcttgatgatttaagcatatatacccta
aaattatcaagaattattcagtggtattgaacaataaggtaagagtgtga
atattcaagaaatggaaagaagaggaacaagggtgagttgactatacttt
cattaacaaagataatagattttattgacaaaaaaaattcatactgaggt
attttaaagagtatagatttaaaattaattagaaacatctttaaggagtc
taaataactcctgaaacccagctctatgatacaatgactataagacatca
ttatacacaggcataagggactgataattttgtttgtcttgttttcaact
acttcagaaaattaattatttttcataaggtatcaaagggctcaagaggt
cagtgtcagaaaaattgacatgccaatttttctttaatcaatttagagct
gaagagagggaaccaaaacacaaacctagagaagttacaaatctagagag
aaaaaaagtggcatggatagactgttgaataaaaccaagaaaatcctcca
tttactgaatggatttaaaaaaaaagattctcaagattaggaatattgtt
ctatcctaaaaacataagatgtcttgttttggctatcgacgactagtatt
taagcacaagagaaaatgaggttctaaactacacgaaagagtatatactt
catggtctaaaaagggaccgatgccattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68741143_68742269
seq2: B6Ng01-066C07.b_43_1138 (reverse)

seq1  TCACTGTGCATCAGAGAATTTCTGAAAATAACGTTTTCTTATATCATAAA  50
      |||||| | ||||||||  |||||||||| ||| ||||||| ||||||||
seq2  TCACTG-GAATCAGAGA--TTCTGAAAAT-ACG-TTTCTTA-ATCATAAA  44

seq1  TGTTCTCATGCTGTGTGGTGACTTTAAAATATGCCTGTGTGTCTAAACTG  100
      | ||||||||||||| ||| || |||||||||||   || |||| |||||
seq2  T-TTCTCATGCTGTG-GGT-AC-TTAAAATATGC---TGGGTCT-AACTG  86

seq1  TGTATTTCCTGGAATTTCCATCACTGTGTGTTTCTGGTTACAACGAACAC  150
           || |||  | ||||||||| |||||||||||| ||| ||| ||||
seq2  ----GTTTCTG--AATTCCATCAC-GTGTGTTTCTGG-TAC-ACG-ACAC  126

seq1  TGGTTACAGAGTCTCTGATGGTAGAAGTGAGTGGCTCCCACTTACTCTCT  200
      ||| ||||||||||||||| |||||||||||| |||||||| ||||||||
seq2  TGG-TACAGAGTCTCTGAT-GTAGAAGTGAGT-GCTCCCAC-TACTCTCT  172

seq1  CAAGCATGTTATCACTGGCCTGTTGGCGGAGGGACCACACCCATTTGGTA  250
      |||||||||||||||||| ||| |||||||||||||||||||||||||||
seq2  CAAGCATGTTATCACTGG-CTG-TGGCGGAGGGACCACACCCATTTGGTA  220

seq1  AATCCTGCTTCCCTGGAACTCTCCTGATTTCTAGACTCAATACTCATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGCTTCCCTGGAACTCTCCTGATTTCTAGACTCAATACTCATGCA  270

seq1  CTTCATTTCTGACGTGCAGCAACATTTTCAAAGCCAGAATCATCAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTCTGACGTGCAGCAACATTTTCAAAGCCAGAATCATCAAGAAT  320

seq1  GGCTTGGGTGCCATTATGTTCTCCTGGGCTTAAACTCAGCTTATCTGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGGTGCCATTATGTTCTCCTGGGCTTAAACTCAGCTTATCTGGAT  370

seq1  CCTCTTATAACCATGTTTCTTGCATCCTTCTTCCTCTGCCCACTTCCTGA  450
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCTTATAACCATG-TTCTTGCATCCTTCTTCCTCTGCCCACTTCCTGA  419

seq1  TTGGCTGACTTTGAGCATCAAGCACAAAATTACTAGAATCTGATTACCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGACTTTGAGCATCAAGCACAAAATTACTAGAATCTGATTACCTG  469

seq1  TAACTGTGTCAGATGAAATCTATTTAACAGGTCTTACGTGTTAATATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTGTCAGATGAAATCTATTTAACAGGTCTTACGTGTTAATATATA  519

seq1  TTTGAAGGTACTAAAATTATGATTGAAACTTGATGTATGTATGGTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGTACTAAAATTATGATTGAAACTTGATGTATGTATGGTTTAAA  569

seq1  TATCCAATTGACACTACCAAAATCATATATTTTTAGAATTTTAAGTATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAATTGACACTACCAAAATCATATATTTTTAGAATTTTAAGTATAA  619

seq1  CTATAAAGTTATATAATATATACATATATATAATTTTTATATATAAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAGTTATATAATATATACATATATATAATTTTTATATATAAAGTA  669

seq1  TAATATAAACATAATTATAAAGTTAAGTAACTGCTGTATTAATGTGAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAACATAATTATAAAGTTAAGTAACTGCTGTATTAATGTGAGTA  719

seq1  ATTTTGTTGTTACTCTGTCAGTACTCCAAGAGTAAAGCTTCATGGTTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTGTTACTCTGTCAGTACTCCAAGAGTAAAGCTTCATGGTTCCC  769

seq1  CCATCCAGTGTGTTTGTAATTGCAGAAGCGTCACAGAATTACTGTTACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGTGTGTTTGTAATTGCAGAAGCGTCACAGAATTACTGTTACAT  819

seq1  GTTCTCCATAGATTCTGGAGTTGAGAATTTGGTTAACAATAATTGAGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCATAGATTCTGGAGTTGAGAATTTGGTTAACAATAATTGAGAAG  869

seq1  CTACAATCTTCAAAAGTAAAATTTAGCTCCTTGTTTATTTTTATAATTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATCTTCAAAAGTAAAATTTAGCTCCTTGTTTATTTTTATAATTTT  919

seq1  ATAAATTATTATGTTTTATAATTTTTAACATGCTTACCTGATGAAAAAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTATTATGTTTTATAATTTTTAACATGCTTACCTGATGAAAAAGT  969

seq1  CTCTACTTTTTAAAGAAAAATAAGAAGGAAGGTAAAATTATAAAATAGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTTTTTAAAGAAAAATAAGAAGGAAGGTAAAATTATAAAATAGAA  1019

seq1  TATTGGCTAATTTACAATAACTAAATAAGAGACATTTTAAAAATGAGTAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGCTAATTTACAATAACTAAATAAGAGACATTTTAAAAATGAGTAT  1069

seq1  GCAGTAAAATAAGACCACAGTGAATTC  1127
      |||||||||||||||||||||||||||
seq2  GCAGTAAAATAAGACCACAGTGAATTC  1096

seq1: chr8_68607426_68608526
seq2: B6Ng01-066C07.g_67_1145

seq1  GAATTCACTAATTGTATATTCAAATTGAGCTAAAGAATATTTGACACGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAATTGTATATTCAAATTGAGCTAAAGAATATTTGACACGAT  50

seq1  CTATTTAATGGAATGAGCTGGAAAGGTAGGAAGAATTGATCAGTAAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAATGGAATGAGCTGGAAAGGTAGGAAGAATTGATCAGTAAGTAT  100

seq1  GACCAAGCATGTGATATTGTCACTGATAATAACTAAGTTATAATGCAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGCATGTGATATTGTCACTGATAATAACTAAGTTATAATGCAACT  150

seq1  CTAAGGAGATTGACCATGAATGGACAATGAAAGCTGAACAAGAAACTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAGATTGACCATGAATGGACAATGAAAGCTGAACAAGAAACTTAT  200

seq1  AAGTAATAGTGTTGGAACATTTCCAGGAATAACCTGGAAAATTATATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATAGTGTTGGAACATTTCCAGGAATAACCTGGAAAATTATATTTA  250

seq1  TATAAAATGTACTATATATAATTGTATATAAATGATATATAATTTATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATGTACTATATATAATTGTATATAAATGATATATAATTTATATG  300

seq1  TAACATATAAATTATAATTTATATGTAATGTATATGATATATAATTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATAAATTATAATTTATATGTAATGTATATGATATATAATTAATG  350

seq1  TATATAAAATTATATATATAATTCTTGATGATTTAAGCATATATACCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAAATTATATATATAATTCTTGATGATTTAAGCATATATACCCTA  400

seq1  AAATTATCAAGAATTATTCAGTGGTATTGAACAATAAGGTAAGAGTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCAAGAATTATTCAGTGGTATTGAACAATAAGGTAAGAGTGTGA  450

seq1  ATATTCAAGAAATGGAAAGAAGAGGAACAAGGGTGAGTTGACTATACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAAGAAATGGAAAGAAGAGGAACAAGGGTGAGTTGACTATACTTT  500

seq1  CATTAACAAAGATAATAGATTTTATTGACAAAAAAAATTCATACTGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAACAAAGATAATAGATTTTATTGACAAAAAAAATTCATACTGAGGT  550

seq1  ATTTTAAAGAGTATAGATTTAAAATTAATTAGAAACATCTTTAAGGAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGAGTATAGATTTAAAATTAATTAGAAACATCTTTAAGGAGTC  600

seq1  TAAATAACTCCTGAAACCCAGCTCTATGATACAATGACTATAAGACATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACTCCTGAAACCCAGCTCTATGATACAATGACTATAAGACATCA  650

seq1  TTATACACAGGCATAAGGGACTGATAATTTTGTTTGTCTTGTTTTCAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACACAGGCATAAGGGACTGATAATTTTGTTTGTCTTGTTTTCAACT  700

seq1  ACTTCAGAAAATTAATTATTTTTCATAAGGTATCAAAGGGCTCAAGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGAAAATTAATTATTTTTCATAAGGTATCAAAGGGCTCAAGAGGT  750

seq1  CAGTGTCAGAAAAATTGACATGCCAATTTTTCTTTAATCAATTTAGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCAGAAAAATTGACATGCCAATTTTTCTTTAATCAATTTAGAGCT  800

seq1  GAAGAGAGGGAACCAAAACACAAACCTAGAGAAGTTACAAAATCTAGAGA  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAAGAGAGGGAACCAAAACACAAACCTAGAGAAGTTAC-AAATCTAGAGA  849

seq1  GAAAAAAAAGTGGCATGGATAGACTGTTGAATAAAAACCAAGAAAATCCT  900
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  G-AAAAAAAGTGGCATGGATAGACTGTTGAAT-AAAACCAAGAAAATCCT  897

seq1  CCATTTACTGAATGGATTTAAAAAAAAAAAGATTCCCAAGGAATTAGGAA  950
      |||||||||||||||||||  |||||||||||||| ||||  ||||||||
seq2  CCATTTACTGAATGGATTT--AAAAAAAAAGATTCTCAAG--ATTAGGAA  943

seq1  TATTGTTCTATTCCTTAAAAAACAATAAGAATGTCTTGTTTTGGCTATCG  1000
      |||||||||| ||||  |||||| ||||| ||||||||||||||||||||
seq2  TATTGTTCTA-TCCT--AAAAAC-ATAAG-ATGTCTTGTTTTGGCTATCG  988

seq1  ACAGACTAGGTAATTAAAGCACAAAGAAGAAAATGAGGTTCTAAAACTAC  1050
      || ||||||   ||| ||||||||   ||||||||||||||| |||||||
seq2  AC-GACTAG--TATTTAAGCACAA--GAGAAAATGAGGTTCT-AAACTAC  1032

seq1  ACGAAAGAGTATATACTTCAATGGTCTTAAAAAAGTGAACCGATGCCATT  1100
      ||||||||||||||||||| |||||||  |||||| | ||||||||||||
seq2  ACGAAAGAGTATATACTTC-ATGGTCT--AAAAAG-GGACCGATGCCATT  1078

seq1  G  1101
      |
seq2  G  1079