BAC Information

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BAC

Clone NameB6Ng01-066D07
Chromosome8 (Build37)
Map Location 7,635,136 - 7,721,270
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665127, EG546032
Downstream geneLOC100039836, Efnb2, 9430010O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066D07.bB6Ng01-066D07.g
ACCDH885446DH885447
length1,0741,126
definitionDH885446|Mus musculus domesticus DNA, BAC clone: B6Ng01-066D07, 5' end.DH885447|Mus musculus domesticus DNA, BAC clone: B6Ng01-066D07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,635,136 - 7,636,222)(7,720,122 - 7,721,270)
sequence
gaattcatattcagactgggcacatgaaaggaatattcactctctgataa
ttattctctccatacataactcgccaatgactgcatgttttctatgcccc
aaatttctaagcttactacactgaatattggaagttcttgcataacgagc
aacaattttttcaaacttaaatatgaaattaacatcactaggttctagag
gaagccactccacctcagtgtttttgactggtaatatatatatgtatgta
tgtataaggggaattgtcagtaaattttctaaagaagtgtatgtttattt
ctaggaaaaaatctattaaatagggttaaaaattagatatatgaaagaag
attgcaaaggaaaagtctacaggggtgagaattgaaatcctggtagggag
tttgggctttattcttatttatagatgacacaaaagagaccaacttacct
gcatatgtagtatggcttttgagatactcatcatagcctgcaactaccaa
ttttctgttattcatttctcttttacatcctggatctagggaccctgaat
gtatgtggcatgatacatttaccctcaggtgataagcaaacaaacaaaac
ccatgacagaagtcattctgacatgttgagaagcatatccaacttgtata
actaactgaacagaacacagaaaaattaagttgatgctgattagaagcta
ctggggcattaaaaaaacttgacaaataaatgatatcatgtaaagatttt
caggctttaagatgaaaaaacggtgggtgttaacaaggctttcaattcag
atcacaaaactggatgaaagagctcatgaaatggacagttcttgagaatt
aagagttaaaatgtcaggttaccagctgcatcaaatgtcagaattgaaca
agggtatagatttgttggatctgtttcttgacacactgcatacactaagc
tttagtagacagtagggaaaattgtatatggcctatgtatggatgacaga
gtagcaggagaatcattctacataggatgagggtatgagatccctaccag
tagactgtattaattatcaaggca

gaattcatggggcctacatgaggggctactgataaaataaagatgataaa
aagtgggagagcactgggagaagcgaggaagtgttggatggaagatgagc
aaagatgaccaaatttctttgaaaacaagtatgcaattcttaacgaataa
ataaaaatattatatttaaaataatattctcacaaggaaattgaaaaact
aaataagcaaaaattatcagtgccatcctgaaaaatggaatgttctatta
agaaaataactttgatcatattcaaatatattaatatataagaattaaag
ctagccatacataaaatccaaatttgtaattgaatttagaggctcaaatt
atagctaatggtggcatttgaaaaattagaaaattggtcaagaaatcata
aaagaaatgatgtgtagactatggaaataaaatggacttttatatctaat
gcagccccaagttctcagttatcaatagtaattaatgtactggaggaaaa
tgaatgtgttgtcattgtttatcttctttataggcaccaaaggaaggcag
gtaattatgaataaattataaaaatcaaatatgaaaagaattgttatttc
actgtctgacgtactgaccattttccagtgaggaaaataattatgtgatt
agaaaaattttcggtatgagacctaaagccacagttacacatcacagatc
ctaaagcagttccaaatgccaaaaatacagctataattcagatagtgaaa
tacaatgatcatagcatgaggagcctgagatctgtatgagaaggtgatct
ggtgacaaggaggcagttctcatgatatgacttggacctttatgaggagc
tgaagacagtctatttcccatcctgtatttacagtttccatttctctagt
tctgaaacctgccaccccttgactttggactctatagcctctgacagaat
gaaaatcccataattgataaagtatatagtttgtatgtttataggcatag
cctagaggactacacatcccctgactaaaatggcatctagaaatcgaatc
tggtggtattgaattaacttaatcactttagatttatttagtgggaggtc
tgcttgaatgagctgaacatccatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_7635136_7636222
seq2: B6Ng01-066D07.b_47_1120

seq1  GAATTCATATTCAGACTGGGCACATGAAAGGAATATTCACTCTCTGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTCAGACTGGGCACATGAAAGGAATATTCACTCTCTGATAA  50

seq1  TTATTCTCTCCATACATAACTCGCCAATGACTGCATGTTTTCTATGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTCTCCATACATAACTCGCCAATGACTGCATGTTTTCTATGCCCC  100

seq1  AAATTTCTAAGCTTACTACACTGAATATTGGAAGTTCTTGCATAACGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTAAGCTTACTACACTGAATATTGGAAGTTCTTGCATAACGAGC  150

seq1  AACAATTTTTTCAAACTTAAATATGAAATTAACATCACTAGGTTCTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTTTTCAAACTTAAATATGAAATTAACATCACTAGGTTCTAGAG  200

seq1  GAAGCCACTCCACCTCAGTGTTTTTGACTGGTAATATATATATGTATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACTCCACCTCAGTGTTTTTGACTGGTAATATATATATGTATGTA  250

seq1  TGTATAAGGGGAATTGTCAGTAAATTTTCTAAAGAAGTGTATGTTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAGGGGAATTGTCAGTAAATTTTCTAAAGAAGTGTATGTTTATTT  300

seq1  CTAGGAAAAAATCTATTAAATAGGGTTAAAAATTAGATATATGAAAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAAAAATCTATTAAATAGGGTTAAAAATTAGATATATGAAAGAAG  350

seq1  ATTGCAAAGGAAAAGTCTACAGGGGTGAGAATTGAAATCCTGGTAGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAAGGAAAAGTCTACAGGGGTGAGAATTGAAATCCTGGTAGGGAG  400

seq1  TTTGGGCTTTATTCTTATTTATAGATGACACAAAAGAGACCAACTTACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTTTATTCTTATTTATAGATGACACAAAAGAGACCAACTTACCT  450

seq1  GCATATGTAGTATGGCTTTTGAGATACTCATCATAGCCTGCAACTACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGTAGTATGGCTTTTGAGATACTCATCATAGCCTGCAACTACCAA  500

seq1  TTTTCTGTTATTCATTTCTCTTTTACATCCTGGATCTAGGGACCCTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTTATTCATTTCTCTTTTACATCCTGGATCTAGGGACCCTGAAT  550

seq1  GTATGTGGCATGATACATTTACCCTCAGGTGATAAGCAAACAAACAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGGCATGATACATTTACCCTCAGGTGATAAGCAAACAAACAAAAC  600

seq1  CCATGACAGAAGTCATTCTGACATGTTGAGAAGCATATCCAACTTGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACAGAAGTCATTCTGACATGTTGAGAAGCATATCCAACTTGTATA  650

seq1  ACTAACTGAACAGAACACAGAAAAATTAAGTTGATGCTGATTAGAAGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTGAACAGAACACAGAAAAATTAAGTTGATGCTGATTAGAAGCTA  700

seq1  CTGGGGCATTAAAAAAACTTGACAAATAAATGATATCATGTAAAGATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCATTAAAAAAACTTGACAAATAAATGATATCATGTAAAGATTTT  750

seq1  CAGGCTTTAAGATGAAAAAACGGTGGGTGTTAACAAGGC-TTCAATTCAG  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGGCTTTAAGATGAAAAAACGGTGGGTGTTAACAAGGCTTTCAATTCAG  800

seq1  ATCACAAAACTGGATGAAAGAGCTCATGAAATGGACAGTTCTTGAGAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAAACTGGATGAAAGAGCTCATGAAATGGACAGTTCTTGAGAATT  850

seq1  AAGAGTTAAAATGTCAGGTTACCAGCTGCATCAAATGTCAGAATTGAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTAAAATGTCAGGTTACCAGCTGCATCAAATGTCAGAATTGAACA  900

seq1  AGGGTATAGATTTTGTTGGATCTGTTTCTTGACACACTGCATACACTAAG  949
      |||||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  AGGGTATAGA-TTTGTTGGATCTGTTTCTTGACACACTGCATACACTAA-  948

seq1  GCTTTAGTAGGACAGTAAGGGAAAAATGTATATGGCCTATGTATGGAAGG  999
      ||||||||| |||||| |||||||| |||||||||||||||||||| | |
seq2  GCTTTAGTA-GACAGT-AGGGAAAATTGTATATGGCCTATGTATGG-ATG  995

seq1  ACAGAGGAGCAAGGAGAATCATCCAACATAGAAATGTAGGGGTATGAGAT  1049
      |||||| ||| ||||||||||| | |||||| |   |  |||||||||||
seq2  ACAGAGTAGC-AGGAGAATCATTCTACATAGGA---TGAGGGTATGAGAT  1041

seq1  ACTCTACCAGTAGAACATGTATTAAATTATCAAAGGCA  1087
       | |||||||||||   |||||| ||||||| ||||||
seq2  -CCCTACCAGTAGA--CTGTATT-AATTATC-AAGGCA  1074


seq1: chr8_7720122_7721270
seq2: B6Ng01-066D07.g_71_1196 (reverse)

seq1  ATATGTGATGTTCATGCATCTATTCAAGCAAGACACTCACACATAAATAA  50
      ||||| |||||||| || || |||||||| |||| ||| ||| ||||| |
seq2  ATATG-GATGTTCA-GC-TC-ATTCAAGC-AGAC-CTCCCAC-TAAAT-A  42

seq1  AATCTAAAAAGTGATTTAAAGTTAAATACAATACCAACCAGATTCGATAT  100
      |||||  |||||||||  ||||| ||| ||||||| |||||||||||| |
seq2  AATCT--AAAGTGATT--AAGTT-AATTCAATACC-ACCAGATTCGAT-T  85

seq1  ACTAGATGCCATTTTTAGTCAGGGGGATTGTGTTAGTCCTCTTAGGCTAT  150
       |||||||||| |||||||||||||   |||| |||||||| ||||||||
seq2  TCTAGATGCCA-TTTTAGTCAGGGG--ATGTG-TAGTCCTC-TAGGCTAT  130

seq1  GGCCTATAAACATACAAACTATATACTTTATCAATTATGGGATTTTCATT  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -GCCTATAAACATACAAACTATATACTTTATCAATTATGGGATTTTCATT  179

seq1  CTTGTCAGAGGCTATAGAGTCCAAAGTCAAGGGGTGGCAGGTTTCAGAAC  250
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TGTCAGAGGCTATAGAGTCCAAAGTCAAGGGGTGGCAGGTTTCAGAAC  228

seq1  TAGAGAAATGGAAACTGTAAATTACAGGATGGGAAATAGACTGTCTTCAG  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TAGAGAAATGGAAACTGTAAA-TACAGGATGGGAAATAGACTGTCTTCAG  277

seq1  CTCCTCATAAAGGTCCAAGTCATATCATGAGAACTGCCTCCTTGTCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCATAAAGGTCCAAGTCATATCATGAGAACTGCCTCCTTGTCACCA  327

seq1  GATCACCTTCTCATACAGATCTCAGGCTCCTCATGCTATGATCATTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACCTTCTCATACAGATCTCAGGCTCCTCATGCTATGATCATTGTAT  377

seq1  TTCACTATCTGAATTATAGCTGTATTTTTGGCATTTGGAACTGCTTTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTATCTGAATTATAGCTGTATTTTTGGCATTTGGAACTGCTTTAGG  427

seq1  ATCTGTGATGTGTAACTGTGGCTTTAGGTCTCATACCGAAAATTTTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGATGTGTAACTGTGGCTTTAGGTCTCATACCGAAAATTTTTCTA  477

seq1  ATCACATAATTATTTTCCTCACTGGAAAATGGTCAGTACGTCAGACAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATAATTATTTTCCTCACTGGAAAATGGTCAGTACGTCAGACAGTG  527

seq1  AAATAACAATTCTTTTCATATTTGATTTTTATAATTTATTCATAATTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAATTCTTTTCATATTTGATTTTTATAATTTATTCATAATTACC  577

seq1  TGCCTTCCTTTGGTGCCTATAAAGAAGATAAACAATGACAACACATTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCTTTGGTGCCTATAAAGAAGATAAACAATGACAACACATTCAT  627

seq1  TTTCCTCCAGTACATTAATTACTATTGATAACTGAGAACTTGGGGCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCAGTACATTAATTACTATTGATAACTGAGAACTTGGGGCTGCA  677

seq1  TTAGATATAAAAGTCCATTTTATTTCCATAGTCTACACATCATTTCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATAAAAGTCCATTTTATTTCCATAGTCTACACATCATTTCTTTT  727

seq1  ATGATTTCTTGACCAATTTTCTAATTTTTCAAATGCCACCATTAGCTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTCTTGACCAATTTTCTAATTTTTCAAATGCCACCATTAGCTATA  777

seq1  ATTTGAGCCTCTAAATTCAATTACAAATTTGGATTTTATGTATGGCTAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGCCTCTAAATTCAATTACAAATTTGGATTTTATGTATGGCTAGC  827

seq1  TTTAATTCTTATATATTAATATATTTGAATATGATCAAAGTTATTTTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCTTATATATTAATATATTTGAATATGATCAAAGTTATTTTCTT  877

seq1  AATAGAACATTCCATTTTTCAGGATGGCACTGATAATTTTTGCTTATTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAACATTCCATTTTTCAGGATGGCACTGATAATTTTTGCTTATTTA  927

seq1  GTTTTTCAATTTCCTTGTGAGAATATTATTTTAAATATAATATTTTTATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCAATTTCCTTGTGAGAATATTATTTTAAATATAATATTTTTATT  977

seq1  TATTCGTTAAGAATTGCATACTTGTTTTCAAAGAAATTTGGTCATCTTTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCGTTAAGAATTGCATACTTGTTTTCAAAGAAATTTGGTCATCTTTG  1027

seq1  CTCATCTTCCATCCAACACTTCCTCGCTTCTCCCAGTGCTCTCCCACTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTCCATCCAACACTTCCTCGCTTCTCCCAGTGCTCTCCCACTTT  1077

seq1  TTATCATCTTTATTTTATCAGTAGCCCCTCATGTAGGCCCCATGAATTC  1149
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATCTTTATTTTATCAGTAGCCCCTCATGTAGGCCCCATGAATTC  1126


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