BAC Information

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BAC

Clone NameB6Ng01-066P17
Chromosome8 (Build37)
Map Location 60,583,093 - 60,583,184
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
Downstream gene4930431L04Rik, BC030500, LOC665116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066P17.bB6Ng01-066P17.g
ACCDH886009DH886010
length540656
definitionDH886009|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P17, 5' end.DH886010|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcttaaaagggacttatgataggaaaatattgaaagagagca
cgtggatccatacactagactaacgcgggaatggaacacgggaatgaaaa
attactgtatgggtagggaacgctagactccaggaggagagcttccttga
aactcttttgcctcatgagtgacttttaagcctctcggcttgtccagttg
actcgaccagagagcgtaacaatttctgtctttttttattggttattttc
tttatttacatttcaaacgttgtcccccttcccagtttcccctcccctac
ctctatgagggtgcttccccactagtccatccatttcttcctcagcagcc
tagcattcccctatcctagatcatcaagcctccacaggaccaaggagcta
ccctctcagtgatgccacgtaaggcagtcctgtgctacatatccggctga
agccatgggtccctccatgtgtactctttgattggtgattgagtccctgg
gagctctgggggtggcggtggggcgagtaggtggttgata
gaattccttcttttaaacatcctgtaaacttatagaaatatgcacaagtt
tgtttcttaatttcttataagataggggcttttgtgttcattgttaattc
agaaaatctaatcaaatctctagcctctttctgacaataccaaatacagt
tgcacgctgcagtaggatgcctatcttggctgattatataaacataaaat
attcatgcttaaaatgttttcaatatccaaatcttaatgatgatgatgat
gatggtggtggtggtggaggtcacagatgtgtgccacagctatgagtggc
tttttaaatgtggatgctaaggtctgaactttactgcctgggctctctcg
gcagcttcaagagcctcagctagttaccaagtacagttctgataactaaa
cagtggagaacgtgaccctgtctgtatgaggattcggtccaccggagcat
cagtggtccatcccttggcagcataaacaatagacaaggtcaagggtcga
ctgttttcaagaacttcttgctaaggctcagaagagttgcctatcatgtc
tcaatgcttcatttcaagtggaactatttaaatatacaacctctgaaaac
agactttcatctgttgaaatcagagaggagagaagattttaaaaaacttt
aagaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_60583093_60583184
seq2: B6Ng01-066P17.b_276_582 (reverse)

seq1  TATCAACCA------------AACAGAACCCCCAGAGCTCCCAGGGACTA  38
      |||||||||            | |   |||||||||||||||||||||| 
seq2  TATCAACCACCTACTCGCCCCACCGCCACCCCCAGAGCTCCCAGGGACTC  50

seq1  AACCACCAGCCAAAGA-AATATTTGAA-------ATGTAAATAAATAAAA  80
      || |||||  ||||||  | |  || |       |||    | |     |
seq2  AATCACCAATCAAAGAGTACACATGGAGGGACCCATG-GCTTCAGCCGGA  99

seq1  TATCCAATAAAA--------------------------------------  92
      |||  |  | |                                       
seq2  TATGTAGCACAGGACTGCCTTACGTGGCATCACTGAGAGGGTAGCTCCTT  149

seq1  --------------------------------------------------  92
                                                        
seq2  GGTCCTGTGGAGGCTTGATGATCTAGGATAGGGGAATGCTAGGCTGCTGA  199

seq1  --------------------------------------------------  92
                                                        
seq2  GGAAGAAATGGATGGACTAGTGGGGAAGCACCCTCATAGAGGTAGGGGAG  249

seq1  --------------------------------------------------  92
                                                        
seq2  GGGAAACTGGGAAGGGGGACAACGTTTGAAATGTAAATAAAGAAAATAAC  299

seq1  --------  92
              
seq2  CAATAAAA  307