BAC Information

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BAC

Clone NameB6Ng01-067J18
Chromosome8 (Build37)
Map Location 123,203,531 - 123,382,257
singlet/doubletdoublet
Overlap geneIrf8
Upstream geneWfdc1, Atp2c2, 4632415K11Rik, Cotl1, BC025816, Usp10, Crispld2, Zdhhc7, 6430548M08Rik, 1700120B06Rik, Gse1, 4833427B12Rik, LOC668301, 1190005I06Rik, Cox4nb, Cox4i1
Downstream geneLOC100042333, Foxf1a, Mthfsd, Foxc2, Foxl1, 1700018B08Rik, Fbxo31, Map1lc3b, Zcchc14, Jph3, Klhdc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067J18.bB6Ng01-067J18.g
ACCDH886440DH886441
length9191,161
definitionDH886440|Mus musculus domesticus DNA, BAC clone: B6Ng01-067J18, 5' end.DH886441|Mus musculus domesticus DNA, BAC clone: B6Ng01-067J18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,381,335 - 123,382,257)(123,203,531 - 123,204,713)
sequence
gaattcatgcaggctctacctctaactgagatgatccctcaagccagctc
cttaggatcaccaggaagaagaggatgagaggggatggtaaagaacccag
gaacaccgtctcagccaggcaaagaggaggcataagggaggttggagtcg
tgctggagactggcaaaacttttggcctgatggagtggttcacccttcat
cttccccagaaagcaagtccattctaactgtgaaaaagacaccagatgaa
tccaaacaagaaatcttctagcaaaatcatgaaactcataaaactaagat
gcttcaaaaaacaaccccagccataagagatctcagaaggctcaatggct
aacatggaacccgaggagaaaggggagccaaccctaggatggcgctggct
gttgggttcttggtgacatcagctactacagctgatggccttctcctcgg
cttcctctgctcttgtacatgaagggcactcactgccaccatcccagaac
tgaacagatttccagggcagtccactgcggctcccagcaacctggtcctg
tgtggagtcggggggtgtggggtgccccagagaaaaccctgattttgcag
aagatgctcagtcaatgaacagctgcctcccgccactcttgccctgcggc
agagcagacagacgcaatgctaagtgcccccaaccgcatgcaagggaagg
ttcccggaagaaaagagcgccagcggtccacagccacgagcctggcccag
ccacatgggaaattccaggacagacactggttaagctgctttagttttgg
ctttgaactcacagagctccaggctaagagaatgtccgaccgagtcccgt
ctgtgaacctctctggggcaatcagaggctgtggctctgttccagacatc
ccacactgccagtgcccac
gaattcctgtggttcctggtggaacagttttcatggtcactagagcctcc
ttaggaacgggacacaggactctcaggacatctggagtttgcactgctgt
cacggtgcaggtggtagtaggactacctggcaaccagtgataagagctca
aaggtggatagtctggtgctgtggactgtcaggtttccccagtgacctga
gtcactgcacactcacttctaggactcccctgggaaactggcctcacata
ggtgtggcccctccatccctgaggtgctgaacagggtccaagggggcaaa
ctgacattaataagcctgttggttttcctggaaattaggcaagttggggg
tcaccaccctacctaatggggagccccagcctttggacaggctggaaggg
caggggtgcagagtttgtcaccacctagcaagtagctgtaatctagtgtc
tatgcatagcctatgatggttatatgactagctctacgctatccagagcc
atctaggagaaagcctccgagcacacccatgagggatcgtcttgacaggg
ttaactgggtgcgaagccttatcttaaaagtgggcggcaccatttcctag
gctggggccctggactgagttaagggaagacagtgaactgagtgccgaca
ctcaccatttgttcctgacctcggatgctgcgtggccaactgcctcttgc
tcaaggatggcttccctgccgtgaattatgagcccaaatcaactctttct
taagcttgctttttttttttttttttcctccgagacagggtttctctgta
tagccctggctgtcctggaactcactttgtagatcaggctggcctcgaac
tcagaaatccacctgcctctgcctcccaagtgctgggattaaaggcatgt
gccatatttcctcagtcacaggaaaaaaatcattgacatatgggaaactg
gctgtcacatccgagtgaacagcagggggtgcaagactcgtgctaggcct
ggtactccaattgcttctttgcctccttgtacctcgccttccaaaccctc
tatgctaaggtctgagcctatttatttaaatttctaaaattaagaaaaat
taattagggttaaattaaggtttcgagtttctcaacttaaaaccattaaa
ataattttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_123381335_123382257
seq2: B6Ng01-067J18.b_50_968 (reverse)

seq1  GTGGGCACTGGCAGTGTGGGATGTGCTGGAACAGAGCCACAGCCTCTGAT  50
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTGGGCACTGGCAGTGTGGGATGT-CTGGAACAGAGCCACAGCCTCTGAT  49

seq1  TGCCCCAGAGAGGTTCCACAGGCGGGACTCGGTCTGACATTCTCTTTAGC  100
      ||||||||||||||| ||||| |||||||||||| ||||||||| |||||
seq2  TGCCCCAGAGAGGTT-CACAGACGGGACTCGGTCGGACATTCTC-TTAGC  97

seq1  CTGGAGCTCTGTGAGTTCAAAGCCAAAACTAAAAGCAGCTTAACCAGTGT  150
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGGAGCTCTGTGAGTTCAAAGCCAAAACT-AAAGCAGCTTAACCAGTGT  146

seq1  CTGTCCTGGAATTTCCCATGTGGCTGGGCCAGGCTCGTGGCTGTGGACCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAATTTCCCATGTGGCTGGGCCAGGCTCGTGGCTGTGGACCG  196

seq1  CTGGCGCTCTTTTCTTCCGGGAACCTTCCCTTGCATGCGGTTGGGGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGCTCTTTTCTTCCGGGAACCTTCCCTTGCATGCGGTTGGGGGCAC  246

seq1  TTAGCATTGCGTCTGTCTGCTCTGCCGCAGGGCAAGAGTGGCGGGAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTGCGTCTGTCTGCTCTGCCGCAGGGCAAGAGTGGCGGGAGGCA  296

seq1  GCTGTTCATTGACTGAGCATCTTCTGCAAAATCAGGGTTTTCTCTGGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCATTGACTGAGCATCTTCTGCAAAATCAGGGTTTTCTCTGGGGC  346

seq1  ACCCCACACCCCCCGACTCCACACAGGACCAGGTTGCTGGGAGCCGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACACCCCCCGACTCCACACAGGACCAGGTTGCTGGGAGCCGCAGT  396

seq1  GGACTGCCCTGGAAATCTGTTCAGTTCTGGGATGGTGGCAGTGAGTGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGCCCTGGAAATCTGTTCAGTTCTGGGATGGTGGCAGTGAGTGCCC  446

seq1  TTCATGTACAAGAGCAGAGGAAGCCGAGGAGAAGGCCATCAGCTGTAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTACAAGAGCAGAGGAAGCCGAGGAGAAGGCCATCAGCTGTAGTA  496

seq1  GCTGATGTCACCAAGAACCCAACAGCCAGCGCCATCCTAGGGTTGGCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGTCACCAAGAACCCAACAGCCAGCGCCATCCTAGGGTTGGCTCC  546

seq1  CCTTTCTCCTCGGGTTCCATGTTAGCCATTGAGCCTTCTGAGATCTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCCTCGGGTTCCATGTTAGCCATTGAGCCTTCTGAGATCTCTTA  596

seq1  TGGCTGGGGTTGTTTTTTGAAGCATCTTAGTTTTATGAGTTTCATGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGGGTTGTTTTTTGAAGCATCTTAGTTTTATGAGTTTCATGATTT  646

seq1  TGCTAGAAGATTTCTTGTTTGGATTCATCTGGTGTCTTTTTCACAGTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAAGATTTCTTGTTTGGATTCATCTGGTGTCTTTTTCACAGTTAG  696

seq1  AATGGACTTGCTTTCTGGGGAAGATGAAGGGTGAACCACTCCATCAGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACTTGCTTTCTGGGGAAGATGAAGGGTGAACCACTCCATCAGGCC  746

seq1  AAAAGTTTTGCCAGTCTCCAGCACGACTCCAACCTCCCTTATGCCTCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTTGCCAGTCTCCAGCACGACTCCAACCTCCCTTATGCCTCCTC  796

seq1  TTTGCCTGGCTGAGACGGTGTTCCTGGGTTCTTTACCATCCCCTCTCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTGGCTGAGACGGTGTTCCTGGGTTCTTTACCATCCCCTCTCATC  846

seq1  CTCTTCTTCCTGGTGATCCTAAGGAGCTGGCTTGAGGGATCATCTCAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTCCTGGTGATCCTAAGGAGCTGGCTTGAGGGATCATCTCAGTT  896

seq1  AGAGGTAGAGCCTGCATGAATTC  923
      |||||||||||||||||||||||
seq2  AGAGGTAGAGCCTGCATGAATTC  919

seq1: chr8_123203531_123204713
seq2: B6Ng01-067J18.g_69_1229

seq1  GAATTCCTGTGGTTCCTGGTGGAACAGTTTTCATGGTCACTAGAGCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGGTTCCTGGTGGAACAGTTTTCATGGTCACTAGAGCCTCC  50

seq1  TTAGGAACGGGACACAGGACTCTCAGGACATCTGGAGTTTGCACTGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAACGGGACACAGGACTCTCAGGACATCTGGAGTTTGCACTGCTGT  100

seq1  CACGGTGCAGGTGGTAGTAGGACTACCTGGCAACCAGTGATAAGAGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTGCAGGTGGTAGTAGGACTACCTGGCAACCAGTGATAAGAGCTCA  150

seq1  AAGGTGGATAGTCTGGTGCTGTGGACTGTCAGGTTTCCCCAGTGACCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGATAGTCTGGTGCTGTGGACTGTCAGGTTTCCCCAGTGACCTGA  200

seq1  GTCACTGCACACTCACTTCTAGGACTCCCCTGGGAAACTGGCCTCACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGCACACTCACTTCTAGGACTCCCCTGGGAAACTGGCCTCACATA  250

seq1  GGTGTGGCCCCTCCATCCCTGAGGTGCTGAACAGGGTCCAAGGGGGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGCCCCTCCATCCCTGAGGTGCTGAACAGGGTCCAAGGGGGCAAA  300

seq1  CTGACATTAATAAGCCTGTTGGTTTTCCTGGAAATTAGGCAAGTTGGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATTAATAAGCCTGTTGGTTTTCCTGGAAATTAGGCAAGTTGGGGG  350

seq1  TCACCACCCTACCTAATGGGGAGCCCCAGCCTTTGGACAGGCTGGAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACCCTACCTAATGGGGAGCCCCAGCCTTTGGACAGGCTGGAAGGG  400

seq1  CAGGGGTGCAGAGTTTGTCACCACCTAGCAAGTAGCTGTAATCTAGTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTGCAGAGTTTGTCACCACCTAGCAAGTAGCTGTAATCTAGTGTC  450

seq1  TATGCATAGCCTATGATGGTTATATGACTAGCTCTACGCTATCCAGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATAGCCTATGATGGTTATATGACTAGCTCTACGCTATCCAGAGCC  500

seq1  ATCTAGGAGAAAGCCTCCGAGCACACCCATGAGGGATCGTCTTGACAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGAGAAAGCCTCCGAGCACACCCATGAGGGATCGTCTTGACAGGG  550

seq1  TTAACTGGGTGCGAAGCCTTATCTTAAAAGTGGGCGGCACCATTTCCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGGGTGCGAAGCCTTATCTTAAAAGTGGGCGGCACCATTTCCTAG  600

seq1  GCTGGGGCCCTGGACTGAGTTAAGGGAAGACAGTGAACTGAGTGCCGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGCCCTGGACTGAGTTAAGGGAAGACAGTGAACTGAGTGCCGACA  650

seq1  CTCACCATTTGTTCCTGACCTCGGATGCTGCGTGGCCAACTGCCTCTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCATTTGTTCCTGACCTCGGATGCTGCGTGGCCAACTGCCTCTTGC  700

seq1  TCAAGGATGGCTTCCCTGCCGTGAATTATGAGCCCAAATCAACTCTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGATGGCTTCCCTGCCGTGAATTATGAGCCCAAATCAACTCTTTCT  750

seq1  TAAGCTTGC-TTTTTTTTTTTTTTTTCCTCCGAGACAGGGTTTCTCTGTA  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTGCTTTTTTTTTTTTTTTTTCCTCCGAGACAGGGTTTCTCTGTA  800

seq1  TAGCCCTGGCTGTCCTGGAACTCACTTTGTAGATCAGGCTGGCCTCGAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGGCTGTCCTGGAACTCACTTTGTAGATCAGGCTGGCCTCGAAC  850

seq1  TCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGT  900

seq1  GCCATAATTTCTCAGTCACAGGAAAAAAATCACTGACATATGGGAAACTG  949
      |||||| || |||||||||||||||||||||| |||||||||||||||||
seq2  GCCATATTTCCTCAGTCACAGGAAAAAAATCATTGACATATGGGAAACTG  950

seq1  GCGGTCACATCCCGAGTGAACAGCAGGGGGTGCAAGGACTCCGTGCTAGG  999
      || ||||||| |||||||||||||||||||||||| |||| |||||||||
seq2  GCTGTCACAT-CCGAGTGAACAGCAGGGGGTGCAA-GACT-CGTGCTAGG  997

seq1  CCTGGGTCTCCAGTGGCTCTCCTGCCCCCCTGTACCTCGCCTTCACAAAC  1049
      |||||  ||||| | |||    |||| || |||||||||||||| |||||
seq2  CCTGGTACTCCAATTGCTTCTTTGCCTCCTTGTACCTCGCCTTC-CAAAC  1046

seq1  CCGCTATGCCAAGGTCTGAG-CTATTTAATTTTTAAATTTCTTAGAAATT  1098
      || |||||| |||||||||| |||||||   |||||||||||   |||||
seq2  CCTCTATGCTAAGGTCTGAGCCTATTTA---TTTAAATTTCT--AAAATT  1091

seq1  AAAAAAAATTAAATTTAGGGTGGTTTTAAAATTTAAAATGGTTTCAAGTT  1148
      || |||||||||  ||||||     |||||  ||||   |||||| ||||
seq2  AAGAAAAATTAA--TTAGGG-----TTAAA--TTAA---GGTTTCGAGTT  1129

seq1  CTTCAAACTTAAAACCATTTAAAATTACATTTGTT  1183
        || ||||||||||||||  ||| ||  ||||||
seq2  TCTC-AACTTAAAACCATT--AAAATAATTTTGTT  1161