BAC Information

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BAC

Clone NameB6Ng01-068A16
Chromosome8 (Build37)
Map Location 37,655,921 - 37,797,914
singlet/doubletdoublet
Overlap geneDlc1, LOC100042892
Upstream geneMfhas1, LOC100041572, Gm501, Cldn23, LOC671641, D8Ertd82e, Lonrf1, EG544878, 6430573F11Rik
Downstream geneA730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149, Sgcz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068A16.bB6Ng01-068A16.g
ACCDH886748DH886749
length1,113907
definitionDH886748|Mus musculus domesticus DNA, BAC clone: B6Ng01-068A16, 5' end.DH886749|Mus musculus domesticus DNA, BAC clone: B6Ng01-068A16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,655,921 - 37,657,057)(37,797,354 - 37,797,914)
sequence
gaattccaggacaaccctgcctggctctacctcctagccctgcccatgac
tctctcattttactccacacagtggcagctttgactccctcactgtacct
gaggccagttccattaactcttcagaagggttgctgcttttgctgtcaaa
tggtaacaaaatatgggatggtgctacccgagggcctccaaggacagcca
gcattggatgctatttcagtggcactattacataacagaattttacttca
gcgttcatcaaacggtctatagcacagcagcatcaatcactgtgtcattt
gataatcaaagacctcatgtggtttaaaataaagcaaatttatcaatcat
tttttttttttactctcttgaggcagggtctctctgtgccgctctggaac
tcactctgtacacaaggttgtccttgaacttggcttggggcctgcccctg
ccccctgagtgctgagactgaagtactgtgtttttaaaggagaggaaaat
gtcaggttacctgcagagagcctcgatggcgtctctgtccaagaagtcat
gttctctcttgaccagcgcaatatcaatagggaacagtagatctgtaaga
agagcaaagacaaggacgtttgttgagagcccaggatcttgacaaattag
actcttctggcaagatgctgagtatctgtggcccacgtttcctagcaagc
tgtgtggatgcaggaaacagcttgtgacaactctgtgcaggtctaaatca
cctctaaaaacactttaaaacctccaaggttgcttcgttgttgcagaagt
ggttcaaaataaccagaaaggcagtaaatacccactggaagttataattt
gagctagaatagatccagccaggagtctccttttgttatgtggcttaaaa
caaaaatgtccttgctcacaagggaccacagggaaaaaaaatcacaaaaa
acaaaagcaaagcaataacaaccagattcagcaggaaagaaagcgaacaa
tggcccgggcagttgaggacagtcatttacatgataggacgacgcagaga
tcagatattgctaattaacaaaattagcattgcattggctagcaggattt
tcagtccagtgaa
gaattctctgtttagttctgggctccattttaattgagctattcattttc
tgatgctatttccttagttcttcatatgttctattctctggcccatgtat
aactggcgaaggctttctcatcctgtaagctgcttgctgctttgctcgga
tgatggtgtcctttgctgtacagaaactctagctgcatgcggtcccattt
gttggtcttaatgcctgcatgatcagggtcctattcagaaagtcctttct
tgtgccaataaagtcaagcctataccttacttcctcttccatcagagtca
gggtccctgatcttatgttgagaaggttcttgatccatttgaatttgagt
tctgtagagggtgatagatatggatctattttcattcctctaactgaagc
aatccagtttgaccagcactatttattgaagatgttgctttctattttct
ccaatgtgtgtattttttccttcttttcctaaaatcaggtgcatgtaagt
acttagggctatgtataggtcttcaattctcttccattgatcaatgtgcc
tgcttttgtgccaatagcatgttggttctactactacagctctgtaagta
catctcgaagtccaggatggtgatagctccaggagtaaagtgacttgttt
taaaacagaaccagctagtaaggaggtggacactttctatgggtttgggg
ggagggttctttgcttgttttggttctcttctttgcagtgctggcaacta
agcccaaggactcacactcactgagcacagagatctgttatttagcagat
agtatcctcttcaactgtatcagtgcccactaaactcatgcctagttcag
tgaaaagctacaggaccaggaatggagaagaaaacacttctcatggaaag
aagctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_37655921_37657057
seq2: B6Ng01-068A16.b_46_1158

seq1  GAATTCCAGGACAACCCTGCCTGGCTCTACCTCCTAGCCCTGCCCATGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAACCCTGCCTGGCTCTACCTCCTAGCCCTGCCCATGAC  50

seq1  TCTCTCATTTTACTCCACACAGTGGCAGCTTTGACTCCCTCACTGTACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATTTTACTCCACACAGTGGCAGCTTTGACTCCCTCACTGTACCT  100

seq1  GAGGCCAGTTCCATTAACTCTTCAGAAGGGTTGCTGCTTTTGCTGTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGTTCCATTAACTCTTCAGAAGGGTTGCTGCTTTTGCTGTCAAA  150

seq1  TGGTAACAAAATATGGGATGGTGCTACCCGAGGGCCTCCAAGGACAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACAAAATATGGGATGGTGCTACCCGAGGGCCTCCAAGGACAGCCA  200

seq1  GCATTGGATGCTATTTCAGTGGCACTATTACATAACAGAATTTTACTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGATGCTATTTCAGTGGCACTATTACATAACAGAATTTTACTTCA  250

seq1  GCGTTCATCAAACGGTCTATAGCACAGCAGCATCAATCACTGTGTCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTCATCAAACGGTCTATAGCACAGCAGCATCAATCACTGTGTCATTT  300

seq1  GATAATCAAAGACCTCATGTGGTTTAAAATAAAGCAAATTTATCAATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATCAAAGACCTCATGTGGTTTAAAATAAAGCAAATTTATCAATCAT  350

seq1  TTTTTTTTTTTACTCTCTTGAGGCAGGGTCTCTCTGTGCCGCTCTGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTACTCTCTTGAGGCAGGGTCTCTCTGTGCCGCTCTGGAAC  400

seq1  TCACTCTGTACACAAGGTTGTCCTTGAACTTGGCTTGGGGCCTGCCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTGTACACAAGGTTGTCCTTGAACTTGGCTTGGGGCCTGCCCCTG  450

seq1  CCCCCTGAGTGCTGAGACTGAAGTACTGTGTTTTTAAAGGAGAGGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTGAGTGCTGAGACTGAAGTACTGTGTTTTTAAAGGAGAGGAAAAT  500

seq1  GTCAGGTTACCTGCAGAGAGCCTCGATGGCGTCTCTGTCCAAGAAGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTTACCTGCAGAGAGCCTCGATGGCGTCTCTGTCCAAGAAGTCAT  550

seq1  GTTCTCTCTTGACCAGCGCAATATCAATAGGGAACAGTAGATCTGTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCTTGACCAGCGCAATATCAATAGGGAACAGTAGATCTGTAAGA  600

seq1  AGAGCAAAGACAAGGACGTTTGTTGAGAGCCCAGGATCTTGACAAATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAAGACAAGGACGTTTGTTGAGAGCCCAGGATCTTGACAAATTAG  650

seq1  ACTCTTCTGGCAAGATGCTGAGTATCTGTGGCCCACGTTTCCTAGCAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTGGCAAGATGCTGAGTATCTGTGGCCCACGTTTCCTAGCAAGC  700

seq1  TGTGTGGATGCAGGAAACAGCTTGTGACAACTCTGTGCAGGTCTAAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGATGCAGGAAACAGCTTGTGACAACTCTGTGCAGGTCTAAATCA  750

seq1  CCTCT-AAAACACTTTAAAACCTCCAAGGTTGCTTCGTTGTTGCAGAAGT  799
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAAAACACTTTAAAACCTCCAAGGTTGCTTCGTTGTTGCAGAAGT  800

seq1  GGTTCAAAATAACCAG-AAGGCAGTAAATACCCACTGGAAGTTATAATTG  848
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  GGTTCAAAATAACCAGAAAGGCAGTAAATACCCACTGGAAGTTATAATTT  850

seq1  AAGCTAGAATAGATCCAGCCAGGAGTCTCC-TTTGTTATGTGGCTTAAAC  897
       ||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  GAGCTAGAATAGATCCAGCCAGGAGTCTCCTTTTGTTATGTGGCTTAAAA  900

seq1  CAAAAATGTCCTTGCTCACAAGGGACCACAGGGAAAAAAAAACACAAAAA  947
      ||||||||||||||||||||||||||||||||||||||||| ||| ||||
seq2  CAAAAATGTCCTTGCTCACAAGGGACCACAGGGAAAAAAAATCAC-AAAA  949

seq1  AACAAAAGCAAAAGCAAAAAACAAACCAGAATTCAGGCCAGGAAAGACAG  997
      ||||||||| ||||||| ||   |||||| ||||||  ||||||||| ||
seq2  AACAAAAGC-AAAGCAATAA--CAACCAG-ATTCAG--CAGGAAAGAAAG  993

seq1  CGAACAATGGCCCCGGGGCAGTTGGAGGGACCAGTCCATTTACATGATAG  1047
      |||||||||||||  |||||||| ||||   |||| ||||||||||||||
seq2  CGAACAATGGCCC--GGGCAGTT-GAGG--ACAGT-CATTTACATGATAG  1037

seq1  GACGGACGCAGAGAATTCAAGATA-TGCTATTTTAAAACAAACATTAGCA  1096
      ||| ||||||||||  || ||||| ||||| ||   |||||| |||||||
seq2  GAC-GACGCAGAGA--TC-AGATATTGCTAATT---AACAAA-ATTAGCA  1079

seq1  TTGCCATATGGCAAGCCAAGGGATTTTTCAGTCCCAGTGAA  1137
      ||| ||| |||| |||  |||   |||||||| ||||||||
seq2  TTG-CAT-TGGCTAGC--AGG--ATTTTCAGT-CCAGTGAA  1113

seq1: chr8_37797354_37797914
seq2: B6Ng01-068A16.g_412_975 (reverse)

seq1  GCAGCTTC-TTACATGCGAAGTGTTTTCTTCTCCATTCCTGGTCCTGTAG  49
      |||||||| || |||| |||||||||||||||||||||||||||||||||
seq2  GCAGCTTCTTTCCATGAGAAGTGTTTTCTTCTCCATTCCTGGTCCTGTAG  50

seq1  CTTTTCACTGAACTAGGCATGAG-TTAGTGGGCACTGATACAGTTG-AGA  97
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  CTTTTCACTGAACTAGGCATGAGTTTAGTGGGCACTGATACAGTTGAAGA  100

seq1  GGATACTATCTGCTAAATAACAGATCTCTGTGCTCAGTGAGTGTGAGTCC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTATCTGCTAAATAACAGATCTCTGTGCTCAGTGAGTGTGAGTCC  150

seq1  TTGGGCTTAGTTGCCAGCACTGCAAAGAAGAGAACCAAAACAAGCAAAGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTTAGTTGCCAGCACTGCAAAGAAGAGAACCAAAACAAGCAAAGA  200

seq1  ACCCTCCCCCCAAACCCATAGAAAGTGTCCACCTCCTTACTAGCTGGTTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCCCCCAAACCCATAGAAAGTGTCCACCTCCTTACTAGCTGGTTC  250

seq1  TGTTTTAAAACAAGTCACTTTACTCCTGGAGCTATCACCATCCTGGACTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAAACAAGTCACTTTACTCCTGGAGCTATCACCATCCTGGACTT  300

seq1  CGAGATGTACTTACAGAGCTGTAGTAGTAGAACCAACATGCTATTGGCAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATGTACTTACAGAGCTGTAGTAGTAGAACCAACATGCTATTGGCAC  350

seq1  AAAAGCAGGCACATTGATCAATGGAAGAGAATTGAAGACCTATACATAGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGGCACATTGATCAATGGAAGAGAATTGAAGACCTATACATAGC  400

seq1  CCTAAGTACTTACATGCACCTGATTTTAGGAAAAGAAGGAAAAAATACAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTACTTACATGCACCTGATTTTAGGAAAAGAAGGAAAAAATACAC  450

seq1  ACATTGGAGAAAATAGAAAGCAACATCTTCAATAAATAGTGCTGGTCAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGAGAAAATAGAAAGCAACATCTTCAATAAATAGTGCTGGTCAAA  500

seq1  CTGGATTGCTTCAGTTAGAGGAATGAAAATAGATCCATATCTATCACCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTGCTTCAGTTAGAGGAATGAAAATAGATCCATATCTATCACCCT  550

seq1  CTACAGAACTCAAA  561
      ||||||||||||||
seq2  CTACAGAACTCAAA  564