BAC Information

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BAC

Clone NameB6Ng01-068F14
Chromosome8 (Build37)19 (Build37)
Map Location 81,621,514 - 81,622,37733,775,449 - 33,775,491
singlet/doubletsingletsinglet
Overlap geneD630040G17Rik
Upstream geneEG622803, Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466, Lsm6, EG666340, EG666346
Downstream gene1700011L22Rik, Mmaa, A630049P17, Smad1, LOC666378, LOC666388, LOC666392, Otud4, Tpd52-ps, Abce1, Anapc10, LOC100039439, Hhip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068F14.bB6Ng01-068F14.g
ACCDH886963DH886964
length859780
definitionDH886963|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F14, 5' end.DH886964|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(81,621,514 - 81,622,377)(33,775,449 - 33,775,491)
sequence
gaattcactatgtggtccaggctagctttgaacttatatagatccaccat
cctctgtctacttagtgctgggagtagaggcgtgccccacctcacccagt
cctaaaacattttaaacctaaatttacattgttcttacgcttctccttgc
ctgcaaactatggctaagcgtatactagcagatttgtgtgaagtggttaa
ggattgggcttgccagatgctggggaccttgactgcagaggcagagcgct
catgttccatcccagagggctgcagattggagggagacaacccaagggtt
gacctctgaccctacacatgtgcagtggcagaggcacacacacacacaca
cacaaataagtaaatgtaaaaatactgttaagtaatttggagctattaat
aggaaggtattttgtctatttgttttattaattctttctactctccacat
tctcaaactcacgctgctgtcgtatctgacaatataaaaacagcggcacg
atcagactaaaattggaaactactttttctttgcatatttctgaacacat
ggaaaggtttattgaatgtgcattgcactgcagatataaatacttcaggt
tgtgctttacaaaggattccagatttttttttaatgctatctcaatgaaa
gaaagaaagaaagaaagaaagaaaggaaggaaggaaggaaggaaggaagg
aaggaaggaaggaaggaaggaaggaagaaagaatttttcctgagccaggt
tttctctctggagacagagacaagatgcggaaggatcccaagtttttgga
cagcctgagctcccctgaaggctggggacatggctgcttcatgagctggg
ggggggggt
gaattcctgatctttccaagacttttaacatgaagggatgtggaattttg
tcaaatgctttttcagcatctaatgtaatgatcatgtggttttttttcct
ctgagtttgtttatgtaatggattacaattgatggatttccatatattga
accatccctgggatgaagcctacttgatcgtggtgaatgatcatttgatg
tgttcttcgattcggttggcaagaattttattgggtatttttgcatcaat
attcataagggaaattagtctgaagttctctttctttgttgggtctttgt
gtggttttggtatcagtgtaattgtgggttaacagaacgaattgggtagt
gttgcttctgtttctattttgtggattagtttgaagagtattagtattag
gacttctttgaagttctgatagaattctgcactaaacccatctggtcctg
ggcttttcttgcttgggaacttttaatgactgctgctatttatttagagg
ttatggagctgtttagatggtttatgtgatcctgatttaactttggtatt
tggtgtctagaaaattgtctgtttcatccagattttccagttgtgttgag
tataggcttttgtagtaggatctgatgattatatttttaatttcctcagt
ttctgtttgttatatctccctttttcatttctgatttttggtactttgga
tattgtctatatgtcctctacttagtatggctaagggttttatctatctt
gttgattttctcaaagaaccatcttcctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_81621514_81622377
seq2: B6Ng01-068F14.b_43_901

seq1  GAATTCACTATGTGGTCCAGGCTAGCTTTGAACTTATATAGATCCACCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTGGTCCAGGCTAGCTTTGAACTTATATAGATCCACCAT  50

seq1  CCTCTGTCTACTTAGTGCTGGGAGTAGAGGCGTGCCCCACCTCACCCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCTACTTAGTGCTGGGAGTAGAGGCGTGCCCCACCTCACCCAGT  100

seq1  CCTAAAACATTTTAAACCTAAATTTACATTGTTCTTACGCTTCTCCTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAACATTTTAAACCTAAATTTACATTGTTCTTACGCTTCTCCTTGC  150

seq1  CTGCAAACTATGGCTAAGCGTATACTAGCAGATTTGTGTGAAGTGGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAACTATGGCTAAGCGTATACTAGCAGATTTGTGTGAAGTGGTTAA  200

seq1  GGATTGGGCTTGCCAGATGCTGGGGACCTTGACTGCAGAGGCAGAGCGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGGCTTGCCAGATGCTGGGGACCTTGACTGCAGAGGCAGAGCGCT  250

seq1  CATGTTCCATCCCAGAGGGCTGCAGATTGGAGGGAGACAACCCAAGGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCCATCCCAGAGGGCTGCAGATTGGAGGGAGACAACCCAAGGGTT  300

seq1  GACCTCTGACCCTACACATGTGCAGTGGCAGAGGCACACACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTGACCCTACACATGTGCAGTGGCAGAGGCACACACACACACACA  350

seq1  CACAAATAAGTAAATGTAAAAATACTGTTAAGTAATTTGGAGCTATTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATAAGTAAATGTAAAAATACTGTTAAGTAATTTGGAGCTATTAAT  400

seq1  AGGAAGGTATTTTGTCTATTTGTTTTATTAATTCTTTCTACTCTCCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTATTTTGTCTATTTGTTTTATTAATTCTTTCTACTCTCCACAT  450

seq1  TCTCAAACTCACGCTGCTGTCGTATCTGACAATATAAAAACAGCGGCACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAACTCACGCTGCTGTCGTATCTGACAATATAAAAACAGCGGCACG  500

seq1  ATCAGACTAAAATTGGAAACTACTTTTTCTTTGCATATTTCTGAACACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACTAAAATTGGAAACTACTTTTTCTTTGCATATTTCTGAACACAT  550

seq1  GGAAAGGTTTATTGAATGTGCATTGCACTGCAGATATAAATACTTCAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGTTTATTGAATGTGCATTGCACTGCAGATATAAATACTTCAGGT  600

seq1  TGTGCTTTACAAAGGATTCCAGATTTTTTTTTAATGCTATCTCAATGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTACAAAGGATTCCAGATTTTTTTTTAATGCTATCTCAATGAAA  650

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGG  700
      ||||||||||||||||||||||    ||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGA----AAGGAAGGAAGGAAGGAAGGAAGG  696

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAATTTTTCCTGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAATTTTTCCTGAGCC  746

seq1  AGGTTTTCTCTCTGGAGACAGAGACAAGATGCGGAAGGATCCCAAGTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCTCTCTGGAGACAGAGACAAGATGCGGAAGGATCCCAAGTTTT  796

seq1  TGGACAGCCTGAGCTCCCCTGAAGGCTGGGGACATGGCTGCTTCAGTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGACAGCCTGAGCTCCCCTGAAGGCTGGGGACATGGCTGCTTCA-TGAG  845

seq1  CTGGGGGGGGGGGT  864
      ||||||||||||||
seq2  CTGGGGGGGGGGGT  859

seq1: chr19_33775449_33775491
seq2: B6Ng01-068F14.g_799_842 (reverse)

seq1  TGGTTCTTTGAGAAAATCAACAAGATGGAT-AAACTCTTAGCCA  43
      |||||||||||||||||||||||||| ||| |||| ||||||||
seq2  TGGTTCTTTGAGAAAATCAACAAGATAGATAAAACCCTTAGCCA  44