BAC Information

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BAC

Clone NameB6Ng01-068P06
Chromosome8 (Build37)
Map Location 37,767,834 - 37,909,849
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041572, Gm501, Cldn23, LOC671641, D8Ertd82e, Lonrf1, EG544878, 6430573F11Rik, Dlc1, LOC100042892
Downstream geneA730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149, Sgcz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068P06.bB6Ng01-068P06.g
ACCDH887399DH887400
length1,1621,105
definitionDH887399|Mus musculus domesticus DNA, BAC clone: B6Ng01-068P06, 5' end.DH887400|Mus musculus domesticus DNA, BAC clone: B6Ng01-068P06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,767,834 - 37,769,016)(37,908,742 - 37,909,849)
sequence
gaattcattacttggtgggatgccaaacgaaagtcagctccagttgttcc
attaacagtgaaggattcagataaactgccaaacattgctatctgcttgt
gcaatttggcactgttgttgttgttaccaggacagaattacaatttgcaa
agctagtccagccaatcgtttgccatacgatctcaactataggggataca
atacctttcaaggagaggcacaccctatgtaattatagtaattaacatgc
agttaggacttctatgatgttagtgcttcgattctagtgacttatttaac
cctcacaacaacccaaggtgggagattattcatggaagccccatctcata
gacgaggagagcagaaaacacagaggttaaataatttgcccattgttacc
cactttgtagggattctaatcctaaaagagccatgctcgcaacttctaca
tgtttctcataggcagtgtgcctaactgttttaggagggcacaactgtct
ggtttggaggataacgttagaaatttggatcaaacaagtacaaagaaaag
aggtagtttatctttgaggccatacattatgatcttaaagcttgcaatga
cgtgtaggcaatttctaacactataatgtcatgttttgctaacatcgtag
ctagcactgtagaactgtgtggaactgctcaaagctcataagcacttgct
catctgcatttactctagtgggatgttgtttacaggtagaaagctagtat
ataatgtataagtactcagccatagtactggagtagtgggagagggtata
tcaactctctataactactggctacaaagcaaaataaaaatcatttagaa
ctgaagctcctagacacagggacagggttattcttggtcacgagtgtgta
tttgtgcagataactgcctcttacatggtctggtccagtccttctccttc
ccatttccctgctttgttctttcttggccttatcttcatatcatgttatc
ccctgacattgcatcagtttctgcatccgttgtcctaatgaaacatgaat
ttcctcagctattcttctccataggattacttgcttcttatcccatttac
atgattgtgaaagataattcctgccttgagtgactgttctcaaagatttt
ttgactttgttt
gaattcaattatcagtgccaatgatttttggtggatcttgtggtattttc
tccatagttatatcatcctcaaacaaggatactttcattttctctttctt
gctctggttgcctttgtttctctctgaaaaagatttccaggactacataa
ataaaaatgatcaaagggagaacccttattttgttctgtggaactatatc
aagttttctctgcctcagacccagtttggttttgtcttttatcttaagga
tatttaaaatgctgatattagtttaatcactattaactgtgcttttatga
aaaaagagtacaactcaggtaacaggacaagaagatgtattatttgtaaa
atgcatacctggaggagcaaaacattttactgtgcagaataactgaaaat
accacaagactgtgggaatgtaagatgcatgtttatcttcatctcccacc
aaagacctcctggagttgcctgatgccaccaagattcgaataatggtgat
gggactaaaatcctttaagcatactgggacataacagcctgattacatcc
tgaactacctagctaagggatcttcagcattcaccagtacatcttgaaga
acctaggggaccttggaaatctaccgaaatggactgtgtactggagttag
cagctggcctttgactggaggtgtcatagacagtagaaataattaaactt
cagtaattgtaattattggagaagaaaagccatatatcacctacttaagt
tctggatagcaacaatagctctaagccatgaattgaattcaacttccact
tttttgattagtgcttgagttaataaattagatagtactaaaaaatcaac
tcagggaagggtgggagctgccagtaccccatcatatactgatgcctttc
aagaggaggtcagaacagttccttccctaatacttgataaaacatggcga
aaatggtgtcacattcctgttgagttcatgcttatttctgaatggccagt
gtatgaccaatctgatcattttccactacttttattcacagttatgaatt
ctttggttcagttaagctcttgctaaagggtaaattgcctgccatgatct
gatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_37767834_37769016
seq2: B6Ng01-068P06.b_46_1207

seq1  GAATTCATTACTTGGTGGGATGCCAAACGAAAGTCAGCTCCAGTTGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACTTGGTGGGATGCCAAACGAAAGTCAGCTCCAGTTGTTCC  50

seq1  ATTAACAGTGAAGGATTCAGATAAACTGCCAAACATTGCTATCTGCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACAGTGAAGGATTCAGATAAACTGCCAAACATTGCTATCTGCTTGT  100

seq1  GCAATTTGGCACTGTTGTTGTTGTTACCAGGACAGAATTACAATTTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTGGCACTGTTGTTGTTGTTACCAGGACAGAATTACAATTTGCAA  150

seq1  AGCTAGTCCAGCCAATCGTTTGCCATACGATCTCAACTATAGGGGATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGTCCAGCCAATCGTTTGCCATACGATCTCAACTATAGGGGATACA  200

seq1  ATACCTTTCAAGGAGAGGCACACCCTATGTAATTATAGTAATTAACATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTTCAAGGAGAGGCACACCCTATGTAATTATAGTAATTAACATGC  250

seq1  AGTTAGGACTTCTATGATGTTAGTGCTTCGATTCTAGTGACTTATTTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGACTTCTATGATGTTAGTGCTTCGATTCTAGTGACTTATTTAAC  300

seq1  CCTCACAACAACCCAAGGTGGGAGATTATTCATGGAAGCCCCATCTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAACAACCCAAGGTGGGAGATTATTCATGGAAGCCCCATCTCATA  350

seq1  GACGAGGAGAGCAGAAAACACAGAGGTTAAATAATTTGCCCATTGTTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAGGAGAGCAGAAAACACAGAGGTTAAATAATTTGCCCATTGTTACC  400

seq1  CACTTTGTAGGGATTCTAATCCTAAAAGAGCCATGCTCGCAACTTCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTAGGGATTCTAATCCTAAAAGAGCCATGCTCGCAACTTCTACA  450

seq1  TGTTTCTCATAGGCAGTGTGCCTAACTGTTTTAGGAGGGCACAACTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCATAGGCAGTGTGCCTAACTGTTTTAGGAGGGCACAACTGTCT  500

seq1  GGTTTGGAGGATAACGTTAGAAATTTGGATCAAACAAGTACAAAGAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGAGGATAACGTTAGAAATTTGGATCAAACAAGTACAAAGAAAAG  550

seq1  AGGTAGTTTATCTTTGAGGCCATACATTATGATCTTAAAGCTTGCAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTTTATCTTTGAGGCCATACATTATGATCTTAAAGCTTGCAATGA  600

seq1  CGTGTAGGCAATTTCTAACACTATAATGTCATGTTTTGCTAACATCGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAGGCAATTTCTAACACTATAATGTCATGTTTTGCTAACATCGTAG  650

seq1  CTAGCACTGTAGAACTGTGTGGAACTGCTCAAAGCTCATAAGCACTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACTGTAGAACTGTGTGGAACTGCTCAAAGCTCATAAGCACTTGCT  700

seq1  CATCTGCATTTACTCTAGTGGGATGTTGTTTACAGGTAGAAAGCTAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCATTTACTCTAGTGGGATGTTGTTTACAGGTAGAAAGCTAGTAT  750

seq1  ATAATGTATAAGTACTCAGCCATAGTACTGGAGTAGTGGGAGAGGGTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTATAAGTACTCAGCCATAGTACTGGAGTAGTGGGAGAGGGTATA  800

seq1  TCAACTCTCTATAACTACTGGCTACAAAGCAAAATAAAAATCATTTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCTCTATAACTACTGGCTACAAAGCAAAATAAAAATCATTTAGAA  850

seq1  CTGAAGCTCCTAGAACACAGGGACAGGGTTATTCTTGGTCACGAGTGTGT  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCTCCTAG-ACACAGGGACAGGGTTATTCTTGGTCACGAGTGTGT  899

seq1  ATTTGTGCAGATAAACTGCCTCTTACATGGTCTGGTCCAGTCCTTCTTCC  950
      |||||||||||| ||||||||||||||||||||||||||||||||| |||
seq2  ATTTGTGCAGAT-AACTGCCTCTTACATGGTCTGGTCCAGTCCTTC-TCC  947

seq1  TTCCCATTTCCCTGCTTTGTTCTTTCTTGGCCTTATCCTCCATATCATGT  1000
      |||||||||||||||||||||||||||||||||||| || ||||||||||
seq2  TTCCCATTTCCCTGCTTTGTTCTTTCTTGGCCTTAT-CTTCATATCATGT  996

seq1  TATCCCCTGACATTTGCATCAGTTTCTGCATCCGTTGGTCCTAATAGACA  1050
      |||||||||||| ||||||||||||||||||||||| |||||||| || |
seq2  TATCCCCTGACA-TTGCATCAGTTTCTGCATCCGTT-GTCCTAAT-GAAA  1043

seq1  CATGTATTTCCCCTCAGCTTATTTCTTCTCTCATAGGATTATCTTGCTTC  1100
      |||| ||||  ||||||||   |||||||| |||||||||| ||||||||
seq2  CATGAATTT--CCTCAGCT--ATTCTTCTC-CATAGGATTA-CTTGCTTC  1087

seq1  TATATCCCA-TTACATTGATTGTAGAAGAATAAATTCTCTGACTATGAGT  1149
      | ||||||| ||||| |||||||  ||||   ||||| ||| || |||||
seq2  T-TATCCCATTTACA-TGATTGTGAAAGA--TAATTC-CTGCCT-TGAGT  1131

seq1  GACTGTTTCTCAAAGATTTTTTTTGACTTTGTTT  1183
      ||||| ||||||||||  ||||||||||||||||
seq2  GACTG-TTCTCAAAGA--TTTTTTGACTTTGTTT  1162

seq1: chr8_37908742_37909849
seq2: B6Ng01-068P06.g_70_1174 (reverse)

seq1  GCATCAGGATCATGGCAGGCAATTTACCCTTCAGCAAAAGCTTAAACTGA  50
      |||||| |||||||||||||||||||||||| ||||| ||||| ||||||
seq2  GCATCA-GATCATGGCAGGCAATTTACCCTTTAGCAAGAGCTT-AACTGA  48

seq1  ACAAAGAAATTCTATAACTGTGAAT-AAAGTAGTTGAAAAATGATCAAGA  99
      || ||  ||||| |||||||||||| ||||||| || ||||||||| |||
seq2  ACCAAAGAATTC-ATAACTGTGAATAAAAGTAG-TGGAAAATGATC-AGA  95

seq1  TTGGTCATACACTGGCCATTCAGAAATAAGCATGAACTC-ACAGG-ATGT  147
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  TTGGTCATACACTGGCCATTCAGAAATAAGCATGAACTCAACAGGAATGT  145

seq1  GACACTATTTTCGCCATGTTTTATC-AGTATTAGGG-AGGAACTGTTCTG  195
      ||||| ||||||||||||||||||| |||||||||| |||||||||||||
seq2  GACACCATTTTCGCCATGTTTTATCAAGTATTAGGGAAGGAACTGTTCTG  195

seq1  ACCTCCTCTTGAAAGGCATCAGGTATATGATGGGGTACTGGCAGCTCCCA  245
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACCTCCTCTTGAAAGGCATCA-GTATATGATGGGGTACTGGCAGCTCCCA  244

seq1  CCCTTCCCTGAGTTGATTTTTTTAGTACTATCTAATTTATTAACTCAAGC  295
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCCTTCCCTGAGTTGA-TTTTTTAGTACTATCTAATTTATTAACTCAAGC  293

seq1  ACTAATCAAAAAAGTGGAAGTTGAATTCAATTCATTGGCTTAGAGCTATT  345
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACTAATCAAAAAAGTGGAAGTTGAATTCAATTCA-TGGCTTAGAGCTATT  342

seq1  GTTGCTATCCAGAACTTAAGTAGGTGATATATGGCTTTTCTTCTCCAATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTATCCAGAACTTAAGTAGGTGATATATGGCTTTTCTTCTCCAATA  392

seq1  ATTACAATTACTGAAGTTTAATTATTTCTACTGTCTATGACACCTCCAGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATTACTGAAGTTTAATTATTTCTACTGTCTATGACACCTCCAGT  442

seq1  CAAAGGCCAGCTGCTAACTCCAGTACACAGTCCATTTCGGTAGATTTCCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCCAGCTGCTAACTCCAGTACACAGTCCATTTCGGTAGATTTCCA  492

seq1  AGGTCCCCTAGGTTCTTCAAGATGTACTGGTGAATGCTGAAGATCCCTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCCTAGGTTCTTCAAGATGTACTGGTGAATGCTGAAGATCCCTTA  542

seq1  GCTAGGTAGTTCAGGATGTAATCAGGCTGTTATGTCCCAGTATGCTTAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGTAGTTCAGGATGTAATCAGGCTGTTATGTCCCAGTATGCTTAAA  592

seq1  GGATTTTAGTCCCATCACCATTATTCGAATCTTGGTGGCATCAGGCAACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTAGTCCCATCACCATTATTCGAATCTTGGTGGCATCAGGCAACT  642

seq1  CCAGGAGGTCTTTGGTGGGAGATGAAGATAAACATGCATCTTACATTCCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGGTCTTTGGTGGGAGATGAAGATAAACATGCATCTTACATTCCC  692

seq1  ACAGTCTTGTGGTATTTTCAGTTATTCTGCACAGTAAAATGTTTTGCTCC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTTGTGGTATTTTCAGTTATTCTGCACAGTAAAATGTTTTGCTCC  742

seq1  TCCAGGTATGCATTTTACAAATAATACATCTTCTTGTCCTGTTACCTGAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTATGCATTTTACAAATAATACATCTTCTTGTCCTGTTACCTGAG  792

seq1  TTGTACTCTTTTTTCATAAAAGCACAGTTAATAGTGATTAAACTAATATC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTCTTTTTTCATAAAAGCACAGTTAATAGTGATTAAACTAATATC  842

seq1  AGCATTTTAAATATCCTTAAGATAAAAGACAAAACCAAACTGGGTCTGAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTAAATATCCTTAAGATAAAAGACAAAACCAAACTGGGTCTGAG  892

seq1  GCAGAGAAAACTTGATATAGTTCCACAGAACAAAATAAGGGTTCTCCCTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAAAACTTGATATAGTTCCACAGAACAAAATAAGGGTTCTCCCTT  942

seq1  TGATCATTTTTATTTATGTAGTCCTGGAAATCTTTTTCAGAGAGAAACAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATTTTTATTTATGTAGTCCTGGAAATCTTTTTCAGAGAGAAACAA  992

seq1  AGGCAACCAGAGCAAGAAAGAGAAAATGAAAGTATCCTTGTTTGAGGATG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACCAGAGCAAGAAAGAGAAAATGAAAGTATCCTTGTTTGAGGATG  1042

seq1  ATATAACTATGGAGAAAATACCACAAGATCCACCAAAAATCATTGGCACT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACTATGGAGAAAATACCACAAGATCCACCAAAAATCATTGGCACT  1092

seq1  GATAATTGAATTC  1108
      |||||||||||||
seq2  GATAATTGAATTC  1105