BAC Information

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BAC

Clone NameB6Ng01-069D12
Chromosome8 (Build37)
Map Location 51,346,503 - 51,347,420
singlet/doubletsinglet
Overlap genenone
Upstream gene4930555F03Rik, LOC100039919, EG667495
Downstream geneLOC100039954, LOC100039966, LOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069D12.bB6Ng01-069D12.g
ACCDH887592DH887593
length9151,099
definitionDH887592|Mus musculus domesticus DNA, BAC clone: B6Ng01-069D12, 5' end.DH887593|Mus musculus domesticus DNA, BAC clone: B6Ng01-069D12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatattctgtactttgtatagattcttgggagataaacatgct
aattctaattttgcattgtatatatatgtaagttctactacatgattatt
cagtttctacttgtacaaagcaccgagcttcacttcactgtaacctattc
acacacatacataataatcaaactctgctcatgtacacttcccattcttc
ttccttggttccttctatacctttctgcaaatctccttattcccttcttt
gtctgaattaaaaaatagattctacttatgcaagaaaacacaaaatataa
atgcatatatattatattatatttatgtgtatgttatatataatgtatat
tatttcatgtagtgagaattttggcttatttaaaaacataaaatgatata
ggaatatgtttttgttcaccaacgtgggatatggaataaatgcaggtgtg
ggatatggggactgcttcagattccccgtagctgcagattatgatttacc
tcatcctctggcaggggcacgattttgccaactatagattgtttttgtta
agtgtatgacatttggaattattgggactttcatgaggttatataaatac
aagtgccccaagaaggatggggtggggaggctgttactaccctgtggttg
cagttgctgttgttgctgctgctgctgcttttactgctgttactggttgt
ggttgctgtttgctgtcttctgggtgctgggtgctgggtaccgggtgctg
agtgctgtttgttggttcctgagagataccctgacaatgaagaatctaac
tcactccaatgaattctagacctcttatcaacaggaagcaggctaatgat
gaccccttttattctaaccttctttcccaagtagtgtaagagttggaagg
ataaaggtggaaagg
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaatttctttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctacttctctgggtgaatttgcttcctttttttctagag
cttttagatgtgtgtcaagctgctagtatgtgctctctcccgttcttatg
gagcactctagctatgagttccctcttaaaatgcttcatggttcccaagg
tttgggtcagttgtgcttcatttcgtaatctctaaaaagtcttaattctt
cttaatcttcctgtccaaggtatcattgaaaagagtgtgtcagttcacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51346503_51347420
seq2: B6Ng01-069D12.b_47_961 (reverse)

seq1  CCTTTCCCACCTTTATCCCTTCCAACTCTTAACACTACTTAGGAAAGAAG  50
      ||||| |||||||||| ||||||||||||| ||||||||| |||||||||
seq2  CCTTT-CCACCTTTAT-CCTTCCAACTCTT-ACACTACTTGGGAAAGAAG  47

seq1  GTTAGAATAAAAAGGGGTCATCATTAGCCTGCTTCCTGTTGATAAGAGGT  100
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAT-AAAAGGGGTCATCATTAGCCTGCTTCCTGTTGATAAGAGGT  96

seq1  CTAGAATTCATTGGAGTGAGTTAGA-TCTTCATTGTCAGGGTATCTCTCA  149
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTAGAATTCATTGGAGTGAGTTAGATTCTTCATTGTCAGGGTATCTCTCA  146

seq1  GGAACCAACAAACAGCACTCAGCACCCGGTACCCAGCACCCAGCACCCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCAACAAACAGCACTCAGCACCCGGTACCCAGCACCCAGCACCCAG  196

seq1  AAGACAGCAAACAGCAACCACAACCAGTAACAGCAGTAAAAGCAGCAGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGCAAACAGCAACCACAACCAGTAACAGCAGTAAAAGCAGCAGCA  246

seq1  GCAGCAACAACAGCAACTGCAACCACAGGGTAGTAACAGCCTCCCCACCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAACAACAGCAACTGCAACCACAGGGTAGTAACAGCCTCCCCACCC  296

seq1  CATCCTTCTTGGGGCACTTGTATTTATATAACCTCATGAAAGTCCCAATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTCTTGGGGCACTTGTATTTATATAACCTCATGAAAGTCCCAATA  346

seq1  ATTCCAAATGTCATACACTTAACAAAAACAATCTATAGTTGGCAAAATCG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAAATGTCATACACTTAACAAAAACAATCTATAGTTGGCAAAATCG  396

seq1  TGCCCCTGCCAGAGGATGAGGTAAATCATAATCTGCAGCTACGGGGAATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGCCAGAGGATGAGGTAAATCATAATCTGCAGCTACGGGGAATC  446

seq1  TGAAGCAGTCCCCATATCCCACACCTGCATTTATTCCATATCCCACGTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGTCCCCATATCCCACACCTGCATTTATTCCATATCCCACGTTG  496

seq1  GTGAACAAAAACATATTCCTATATCATTTTATGTTTTTAAATAAGCCAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAAAAACATATTCCTATATCATTTTATGTTTTTAAATAAGCCAAA  546

seq1  ATTCTCACTACATGAAATAATATACATTATATATAACATACACATAAATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCACTACATGAAATAATATACATTATATATAACATACACATAAATA  596

seq1  TAATATAATATATATGCATTTATATTTTGTGTTTTCTTGCATAAGTAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAATATATATGCATTTATATTTTGTGTTTTCTTGCATAAGTAGAA  646

seq1  TCTATTTTTTAATTCAGACAAAGAAGGGAATAAGGAGATTTGCAGAAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTTTAATTCAGACAAAGAAGGGAATAAGGAGATTTGCAGAAAGG  696

seq1  TATAGAAGGAACCAAGGAAGAAGAATGGGAAGTGTACATGAGCAGAGTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAGGAACCAAGGAAGAAGAATGGGAAGTGTACATGAGCAGAGTTT  746

seq1  GATTATTATGTATGTGTGTGAATAGGTTACAGTGAAGTGAAGCTCGGTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTATGTATGTGTGTGAATAGGTTACAGTGAAGTGAAGCTCGGTGC  796

seq1  TTTGTACAAGTAGAAACTGAATAATCATGTAGTAGAACTTACATATATAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACAAGTAGAAACTGAATAATCATGTAGTAGAACTTACATATATAT  846

seq1  ACAATGCAAAATTAGAATTAGCATGTTTATCTCCCAAGAATCTATACAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCAAAATTAGAATTAGCATGTTTATCTCCCAAGAATCTATACAAA  896

seq1  GTACAGAATATGAGAATTC  918
      |||||||||||||||||||
seq2  GTACAGAATATGAGAATTC  915