BAC Information

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BAC

Clone NameB6Ng01-069E24
Chromosome8 (Build37)
Map Location 24,113,836 - 24,114,956
singlet/doubletsinglet
Overlap genenone
Upstream geneAtp7b, Alg11, Nek5, Nek3, Ckap2, Vps36, Rpl30-ps2, Thsd1, Tpte, Slc25a15, LOC547006, Mrps31, AI316807, Slc20a2, LOC100040803, Vdac3, Dkk4, Polb, Ikbkb, Plat, Ap3m2, Myst3, LOC100042253
Downstream geneAnk1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1, LOC100040931, Zmat4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069E24.bB6Ng01-069E24.g
ACCDH887659DH887660
length1,119679
definitionDH887659|Mus musculus domesticus DNA, BAC clone: B6Ng01-069E24, 5' end.DH887660|Mus musculus domesticus DNA, BAC clone: B6Ng01-069E24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctgctctgtgaatgtccttgttgccaaaactcttaccagaaa
gtaggccccggttaactgtaacttgggcaaacgtgggcagttttagtctc
atgaatccagaatccctagatgaattaagcagaggaaaaccattgatcca
acgcgcagaatcctggggaggccagaaagttctggggaggggaaccgagc
caagaggctatgcttggttgatgggtcagcagaaataagaatcagggtga
tagccaggatccccaagggccttcaggcttctaagagaggtcacagaaga
ttgctattgactgccatagtttattcttccttcctcttgctagcaggcta
gccatccttccaagccttctgtgctgggggaagaagagagttacttggat
tgcaaaatttgtatcaggaaacactttcagatgcttcccagtgttggtca
gtgtggtggtttgtatatgcttggcccagggaatggcgctattaggaagt
acggccttgttggtgcaggtgtggccttgttggaggaaatgtgtaattgt
agagtggactttgagaccctcctcataagccacttgggagccagtcttct
gttgcctttcgatcaagatgtagaactttcggctcctccagccccatgtc
tgcctggacgctgccattcttcctaccttgatgataatggaatggatctc
taacctgtaagccagccccaattaaatgtcctttataagagttgccttgg
tcacggtgtctcttcacagcaatggaaaccctaactaagacagtcaggag
cccctggaaggaggcagacaaccagagtgatagcctctctcttccacagt
tgctgccatgtaaggctccaggggcaatggctatgaagatgtggtcttct
ttctctttctcctctgaactaatccctctgggagagtactgctcagaatc
tcccacctatgtggtttacctcagttactgtgcagaggtgaggaggcact
cactgtgttacagtgaagctgaacatggtgaccagatggtgactttcttc
actgtcttacctgtgctgcatagtgaggggcgaaggaacacaccctacga
gatcgggccaccatggccg
gaattcactctgcagatcaggtagcctcagactcagcaatctctgctgcc
caagtgctgggattacagacatgagccagcactgcccagccttgctggtc
ttttcttaataactttctttttcgcgttaatttatttattcatttacttt
acacttgctcacagactcctctctactctgagtccccctcacagcccctc
ccccatgcaccctctccttcccctctgagaagggggatccccctcccccg
taccaatccaccctggcacatcaagtcactacaggactagccacaccctt
tctcactaaagccagacaaggcagcccagttagggcaacaggaaccacag
ggaggcaacacagtcagagacagccccagctccagttgttaggggaccca
cataaagatcaaggtgcacatctgcttcatatgtggtgagggtgggggaa
agctaggtccagcccatttatgctctttggttggtgcttcagtctctggg
agcccccaagggtccaggttagttgactctgttggtcttcttatggagtc
cctgtcccatccggatctctcaatccttcccacaatggggaacggggtga
agaaccagggagagagggccgggagagtgaacagaaatttgtaggtctct
ctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_24113836_24114956
seq2: B6Ng01-069E24.b_47_1165

seq1  GAATTCAGCTGCTCTGTGAATGTCCTTGTTGCCAAAACTCTTACCAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGCTCTGTGAATGTCCTTGTTGCCAAAACTCTTACCAGAAA  50

seq1  GTAGGCCCCGGTTAACTGTAACTTGGGCAAACGTGGGCAGTTTTAGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCCCCGGTTAACTGTAACTTGGGCAAACGTGGGCAGTTTTAGTCTC  100

seq1  ATGAATCCAGAATCCCTAGATGAATTAAGCAGAGGAAAACCATTGATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCCAGAATCCCTAGATGAATTAAGCAGAGGAAAACCATTGATCCA  150

seq1  ACGCGCAGAATCCTGGGGAGGCCAGAAAGTTCTGGGGAGGGGAACCGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCGCAGAATCCTGGGGAGGCCAGAAAGTTCTGGGGAGGGGAACCGAGC  200

seq1  CAAGAGGCTATGCTTGGTTGATGGGTCAGCAGAAATAAGAATCAGGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGCTATGCTTGGTTGATGGGTCAGCAGAAATAAGAATCAGGGTGA  250

seq1  TAGCCAGGATCCCCAAGGGCCTTCAGGCTTCTAAGAGAGGTCACAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGGATCCCCAAGGGCCTTCAGGCTTCTAAGAGAGGTCACAGAAGA  300

seq1  TTGCTATTGACTGCCATAGTTTATTCTTCCTTCCTCTTGCTAGCAGGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTGACTGCCATAGTTTATTCTTCCTTCCTCTTGCTAGCAGGCTA  350

seq1  GCCATCCTTCCAAGCCTTCTGTGCTGGGGGAAGAAGAGAGTTACTTGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCTTCCAAGCCTTCTGTGCTGGGGGAAGAAGAGAGTTACTTGGAT  400

seq1  TGCAAAATTTGTATCAGGAAACACTTTCAGATGCTTCCCAGTGTTGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATTTGTATCAGGAAACACTTTCAGATGCTTCCCAGTGTTGGTCA  450

seq1  GTGTGGTGGTTTGTATATGCTTGGCCCAGGGAATGGCGCTATTAGGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTGGTTTGTATATGCTTGGCCCAGGGAATGGCGCTATTAGGAAGT  500

seq1  ACGGCCTTGTTGGTGCAGGTGTGGCCTTGTTGGAGGAAATGTGTAATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCCTTGTTGGTGCAGGTGTGGCCTTGTTGGAGGAAATGTGTAATTGT  550

seq1  AGAGTGGACTTTGAGACCCTCCTCATAAGCCACTTGGGAGCCAGTCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGACTTTGAGACCCTCCTCATAAGCCACTTGGGAGCCAGTCTTCT  600

seq1  GTTGCCTTTCGATCAAGATGTAGAACTTTCGGCTCCTCCAGCCCCATGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTTTCGATCAAGATGTAGAACTTTCGGCTCCTCCAGCCCCATGTC  650

seq1  TGCCTGGACGCTGCCATTCTTCCTACCTTGATGATAATGGAATGGATCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGACGCTGCCATTCTTCCTACCTTGATGATAATGGAATGGATCTC  700

seq1  TAACCTGTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGTTGCCTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGTAAGCCAGCCCCAATTAAATGTCCTTTATAAGAGTTGCCTTGG  750

seq1  TCACGGTGTCTCTTCACAGCAATGGAAACCCTAACTAAGACAGTCAGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGTGTCTCTTCACAGCAATGGAAACCCTAACTAAGACAGTCAGGAG  800

seq1  CCCCTGGAAGGAGGCAGACAACCAGAGTGATAGCCTCTCTCTTCCACAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGAAGGAGGCAGACAACCAGAGTGATAGCCTCTCTCTTCCACAGT  850

seq1  TGCTGCCATGTAAGGCTCCAGGGGCAATGGCTATGAAGATGTGGTCTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCATGTAAGGCTCCAGGGGCAATGGCTATGAAGATGTGGTCTTCT  900

seq1  TTCTCCTTCTCCTCTGAACTAATCCCTCTGGGAGAGTAACTGCTCAGAAT  950
      ||||| ||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCTCTTTCTCCTCTGAACTAATCCCTCTGGGAGAGT-ACTGCTCAGAAT  949

seq1  CTCCCACCTATGTGGTTTACCTCAGTTACTGTGGCAGAGGTGAGGAGGCA  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTCCCACCTATGTGGTTTACCTCAGTTACTGT-GCAGAGGTGAGGAGGCA  998

seq1  CTCCACTGTGTTACAGTGAAGCTGGAACATGGTGACCAGATGGTGAC-TT  1049
      || |||||||||||||||||||| ||||||||||||||||||||||| ||
seq2  CT-CACTGTGTTACAGTGAAGCT-GAACATGGTGACCAGATGGTGACTTT  1046

seq1  CTTCACTGTCCTTACCTGTGCTGCATAGTGAGGGGCGAAGGAACACACAC  1099
      ||||||||| |||||||||||||||||||||||||||||||||||||| |
seq2  CTTCACTGT-CTTACCTGTGCTGCATAGTGAGGGGCGAAGGAACACACCC  1095

seq1  TAC-AGATCAGGCCA-CATGGCCG  1121
      ||| ||||| ||||| ||||||||
seq2  TACGAGATCGGGCCACCATGGCCG  1119