BAC Information

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BAC

Clone NameB6Ng01-069H21
Chromosome8 (Build37)8 (Build37)
Map Location 56,197,061 - 56,200,76856,197,465 - 56,197,974
singlet/doubletsingletsinglet
Overlap geneLOC100040382, LOC100040392
Upstream geneVegfc, Spcs3, Asb5, Spata4, Wdr17, Gpm6a, LOC667624, LOC100040156
Downstream geneEG546212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069H21.bB6Ng01-069H21.g
ACCDH887786DH887787
length396506
definitionDH887786|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H21, 5' end.DH887787|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(56,197,061 - 56,200,768)(56,197,465 - 56,197,974)
sequence
attctcattggacctttgcctgcttctctggctcatgcctgtctcacttt
ttctcactatcaatgttttatctctcttttctgtctctcctttacacact
atgtgtgattacccaatactcactttacaattagtgggtatactgctggt
tttctccttggcttttgctgacaccaacatgtgaccttgcttgcatccct
aggaccctctaaagcatactttaattttaagtgccaatcaatctgagctc
ttaccctaatgagagacaatgtctgggaactttggatcagttttgttctc
aatcctataggcaaattatttctctctctctctctctctctctctctctc
tctctctctctctctctgtctctgtctctctgtgtctctctctctc
aaggcaaggtacagataaccctagacacagagacacagaatcccttctac
aaccctgaaatgcaaaggtgtggctgtgcacctggttctatgcacctgtg
tggacttccattggctacaaggttgtgggaagaagcagcaagaggctttc
agcaaacaggtgcctccaataagttttcctacaaaggaaaggactttgcc
ctaaggaggttcagtgggtggaggtcacatggctgggtggccattttgca
gtatgaggaaatgtatgaggagaacagattccatcctgttttgtttgttg
gtttacttagttggttttggtgttggtgttggtgttggttgtggttttgc
ttttggttgtttgattgattgatttcatttacatagatagatagattgat
agatagagagatatgtaaattttttccatcaggtctttgtttggaggcct
acaggaaatcttgatattggcgactgggcgtggcttccatgcctgtttgt
ggcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_56197061_56200768
seq2: B6Ng01-069H21.b_47_448 (reverse)

seq1  GAGAGAGAGAGAGGGAGGGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATAACTTGCCTATAG  100
                                                        
seq2  --------------------------------------------------  0

seq1  GATTGAGAACAAAACTGAACCAAAGATCCCAGACATTGTCTCTCATTAGG  150
                                                        
seq2  --------------------------------------------------  0

seq1  GTAAGAGCTCAGATGGATTGGCACTTAAAATTAAAGTATGCTTTAGAGGG  200
                                                        
seq2  --------------------------------------------------  0

seq1  TCCTAGGGATGCAAGCAAGGTCACATGTTGGTGTCAGCAAAAGCCAAGGA  250
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAACCAGCAGTATACCCACTAATTGTAAAGTGAGTATTGGGTAATCAC  300
                                                        
seq2  --------------------------------------------------  0

seq1  ACATAGTGTGTAAAGGAGAGACAGAAAAGAGAGATAAAACATTGATAGTG  350
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAAAGCGAGACAGGCATGAGCCAGAGAAGCAGGCAAAGGTCCAATGA  400
                                                        
seq2  --------------------------------------------------  0

seq1  GAATGAATTCAAGGCAAGGTACAGATAACCCTAGACACAGAGACACAGAA  450
                                                        
seq2  --------------------------------------------------  0

seq1  TCCCATCTACAACCCTGAAATGCAAAGGTGTGTCTGTGCACCTGGTTCTA  500
                                                        
seq2  --------------------------------------------------  0

seq1  TGAACCTGTGTGGACTTCCATTGGCTACAAGGTTGTGGGAAGAAGCAGCA  550
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGGCTTGCAGCAAACAGGTGCCTCCAATAAGTTTTCCTACAAAGAAAG  600
                                                        
seq2  --------------------------------------------------  0

seq1  GACTTTGCCCTAAGGAGGTTCAGTGGGTGGAGGTCACATGGCTGGGTGGC  650
                                                        
seq2  --------------------------------------------------  0

seq1  CATTTTGCAGTATGAGGAAATGTATGAGGAGAACAGATTCCATCCTGTTT  700
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTTGTTGGTTTACTTAGTTGGTTTTGGTGTTGGTGTTGGTGTTGGTTG  750
                                                        
seq2  --------------------------------------------------  0

seq1  TGGTTTTGCTTTTGGTTGTTTGATTGATTGATTTCATTTACATAGATAGA  800
                                                        
seq2  --------------------------------------------------  0

seq1  TAGATTGATAGATAGAGAGATATGTAAATTTTTTCCATCAGGTCTTTGTT  850
                                                        
seq2  --------------------------------------------------  0

seq1  TGGAGGCCTACAGGAAATCTTGAGATTTGGCGACTGGGCGTGGCTTCCAT  900
                                                        
seq2  --------------------------------------------------  0

seq1  GCCTGTGTGTGGCAGCCATCTTGAGACTGGGCGTGGCTGAGGTCCCACCT  950
                                                        
seq2  --------------------------------------------------  0

seq1  GTCAGGGGCAGTTATAAAAGGGGATGCCTGACAGAGGCAAGGGCTTCTAA  1000
                                                        
seq2  --------------------------------------------------  0

seq1  GCTGTGAGCTTCTGTCTGTAGGTGTTCTCTCTCTGCTCAGGAGAGCACAC  1050
                                                        
seq2  --------------------------------------------------  0

seq1  ACCCAACTAGAGGCAGGTCACAAGGTGTGTCTGGCGGGCAGATCGAACCT  1100
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGAATCCAGCCCTGTCCTCGGGAGTGGTCGTGGAGACTAGCTCCGAGG  1150
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGTGTTCTGCAGAAGCTGCTGGATCGCCTTTGCCAGGAGACCGACCCA  1200
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAAGATCTACAAAACACTGAAGAAAATGTCTTCTCTTCCTTCTCTGTG  1250
                                                        
seq2  --------------------------------------------------  0

seq1  TGACTGCCTTGCAGAGATTGGCTTCAGACAGACCATCAAGTCCTTGAAGA  1300
                                                        
seq2  --------------------------------------------------  0

seq1  AACAGCAGCTCCTCGAGCCCTTTGTAAAGGACTTAGTGGCCCAGTGGTCC  1350
                                                        
seq2  --------------------------------------------------  0

seq1  ACTGGGTTCCTGCATGGACCCCAGCCTGAGCAGACCCAGCAGGACTTTGG  1400
                                                        
seq2  --------------------------------------------------  0

seq1  CTTGGAGAAGGGCCTCACAACGGAGGGCCGGAGCACCTCCCCAGAAGAGA  1450
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCCCAGGAGCAAGCATCCCAGGAAGTCCGCGGAGATGGGAGAGAGGTT  1500
                                                        
seq2  --------------------------------------------------  0

seq1  TAACTTGGGCTTTGCAGCTGCTGTCCAGGCAGCAGCTCTTGCCTAAGCCA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  GAGCCGAAAATCGCACCAAAGGTCCAACCGTAGGGCACCTCACATTCGAA  1600
                                                        
seq2  --------------------------------------------------  0

seq1  GCCCGCATCCAGGAGAAAACTGGAGCCCTGAGCTGCAGCAAGATGTCCAG  1650
                                                        
seq2  --------------------------------------------------  0

seq1  AACCTGGTGCACCTAGGAACGTCCAGGGCGAGCCTGGAGGAGCCTTGGCA  1700
                                                        
seq2  --------------------------------------------------  0

seq1  GCAGGAAGGGGCCAAGCCCCTGTCCAGAAAGCCAGGGGCTGGGCCACAGG  1750
                                                        
seq2  --------------------------------------------------  0

seq1  AGACCACTGGGCTTGTGTTTGGTGGGCACAGCAAGTGCCAGCCACCAGGC  1800
                                                        
seq2  --------------------------------------------------  0

seq1  AACTGGGAGCAGGAGGAAGCCCCTGGAGCTGGTTCATCCTGGGCTTGCCT  1850
                                                        
seq2  --------------------------------------------------  0

seq1  CAATGGGGAGTGCTGCTCTCCTTCCTCTTCGGAGCGTCCACGGGGCAAGA  1900
                                                        
seq2  --------------------------------------------------  0

seq1  GGCAGAGGTGGGAACCCCGGTGTCCAGCCGAGGCCCAGAGTCCTCCTGCA  1950
                                                        
seq2  --------------------------------------------------  0

seq1  AAGGTGCCTCGAGAGGAGTCTGGAAGCTCCATGGATCTGAGTCCCATTGC  2000
                                                        
seq2  --------------------------------------------------  0

seq1  TGCCAGCACCATTCCAGAGACTCCCTCCAGTGGCCAAGTCTGGTTCAAAT  2050
                                                        
seq2  --------------------------------------------------  0

seq1  GGGATCTTGCCCAGGAGACATTTTCCTCTCAGCAGGATCATGAAGCCTCA  2100
                                                        
seq2  --------------------------------------------------  0

seq1  GCTTGGGGGTGGGAGCTCAGGAAGCAGCACAGAACCCGAGTCTATTCAGG  2150
                                                        
seq2  --------------------------------------------------  0

seq1  TTGCAGGCCTGCAGCAGGACCCCAGCAGAAGCGCACTGGAACCAGGGATG  2200
                                                        
seq2  --------------------------------------------------  0

seq1  GTGCTCACTGCCAGGCTGGCAAGGACAAAGTTGGGCTTGGGCAGCCAGAA  2250
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAAGTCCTGGCCCCAGGGCCGCAGGTGCAAGGAATCCTACAGCCAGCC  2300
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGGCCCCCACAGCCCTGCAGCTTCAGGGGTCCCAAGAGGAGAGGCTGC  2350
                                                        
seq2  --------------------------------------------------  0

seq1  AAACCGTCATAGGCCGCCTCCAAAGCACAGGAGCCAAGAGGCCTCAACCC  2400
                                                        
seq2  --------------------------------------------------  0

seq1  AGACAGACGATGATGGTCTCCTTCATCACCGAGCTCAAGAGCCCCAGCCA  2450
                                                        
seq2  --------------------------------------------------  0

seq1  ACAAGGACAGCCAGGACCCACTGGGGCTGCCTCTGCCCAAAATGCCCACA  2500
                                                        
seq2  --------------------------------------------------  0

seq1  GTCTTCCTGAGGCTCCTGCCCATCCTCCAGCCCAGAGGGCTTCCTGCCTT  2550
                                                        
seq2  --------------------------------------------------  0

seq1  CTCCTTGGAGAAAGAGGCACCAAGAAGGGCCCTGCTAAAAGATCTGCTCC  2600
                                                        
seq2  --------------------------------------------------  0

seq1  TCTCATGGCCAAGGCCCTGAAGGACTACAGAAAGTGCTTCTATAAAAGGT  2650
                                                        
seq2  --------------------------------------------------  0

seq1  GAACCCCAGATGATTTCCATCACCAGAAAACCTGCAACTCCTGAGACTTG  2700
                                                        
seq2  --------------------------------------------------  0

seq1  GACTGACTGGACACACAGGTGCTTCCCTCCAGGGACTGCCACATGGTACA  2750
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTGGGTTTAGGGCTCCGGGCAGACTTCCCAGCAGCTAATCTTGGCATT  2800
                                                        
seq2  --------------------------------------------------  0

seq1  CTCACTGGACTTCTTTACACAGTTTTCCACACCTTAACTTTTGTCCCATG  2850
                                                        
seq2  --------------------------------------------------  0

seq1  TCAATTCTCAAAACATCTTCAAAAATAAATCAATATCTCTCCCACAATCA  2900
                                                        
seq2  --------------------------------------------------  0

seq1  ACTTTGTGGGTTTGTCTCTACATTACTTGTGAAGGATTGATACCCATGGA  2950
                                                        
seq2  --------------------------------------------------  0

seq1  CATAGATACAGTTTAGCAGTTGGACAAAGAGACTAACAGTCTGCCTGCTG  3000
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGTTTTGCAAAGACGCATGTAGGATCGTAGATGGTAGAAGAGATACCT  3050
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGTCACAAAGAGAAGTAGGCACATCAATATGTTTGTGGAAGTCTGGCA  3100
                                                        
seq2  --------------------------------------------------  0

seq1  GTAGACTTGATATCAGTGCCCACAAACCAGTAGGAATCAAGGCAGTTTGT  3150
                                                        
seq2  --------------------------------------------------  0

seq1  GTGTGTGTGTGCCTGTGTGTGTGGGGGGGAATGTGCATGTATATGTGTGT  3200
                                                        
seq2  --------------------------------------------------  0

seq1  GCATGCATGCCCTCATGTGTGTGTATTTTTTATGGGTATGTGTCTGTGAG  3250
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGTTCATGTGTGTGTGTGGTACAACTATTTGTATGTGTGTGATGAAGA  3300
                                                      ||
seq2  ------------------------------------------------GA  2

seq1  AAAGGAAAGTTACACGAGTACAGAGAGGCAGAGAGAGAGAGAGAGAGAGA  3350
          || ||  | ||    |||||||| |||||| |||||||||||||||
seq2  ----GAGAGAGAGAC----ACAGAGAGACAGAGACAGAGAGAGAGAGAGA  44

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATAACTTGCCTATAGGA  3400
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATAATTTGCCTATAGGA  94

seq1  TTGAGAACAAAACTGATCCAAAGTTCCCAGACATTGTCTCTCATTAGGGT  3450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAACAAAACTGATCCAAAGTTCCCAGACATTGTCTCTCATTAGGGT  144

seq1  AAGAGCTCAGATGGATTGGCACTTAAAATTAAAGTATGCTTTAGAGGGTC  3500
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTCAGATTGATTGGCACTTAAAATTAAAGTATGCTTTAGAGGGTC  194

seq1  CTAGGGATGCAAGCAAGGTCACATGTTGGTGTCAGCAAAAGCCAAGGAGA  3550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGATGCAAGCAAGGTCACATGTTGGTGTCAGCAAAAGCCAAGGAGA  244

seq1  AAACCAGCAGTATACCCACTAATTGTAAAGTGAGTATTGGGTAATCACAC  3600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGCAGTATACCCACTAATTGTAAAGTGAGTATTGGGTAATCACAC  294

seq1  ATAGTGTGTAAAGGAGAGACAGAAAAGAGAGATAAAACATTGATAGTGAG  3650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTGTAAAGGAGAGACAGAAAAGAGAGATAAAACATTGATAGTGAG  344

seq1  AAAAAGTTAGACAGGCATGAGCCAGAGAAGCAGGCAAAGGTCCAATGAGA  3700
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGAGACAGGCATGAGCCAGAGAAGCAGGCAAAGGTCCAATGAGA  394

seq1  ATGAATTC  3708
      ||||||||
seq2  ATGAATTC  402

seq1: chr8_56197465_56197974
seq2: B6Ng01-069H21.g_67_576

seq1  GAATTCAAGGCAAGGTACAGATAACCCTAGACACAGAGACACAGAATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCAAGGTACAGATAACCCTAGACACAGAGACACAGAATCCC  50

seq1  ATCTACAACCCTGAAATGCAAAGGTGTGTCTGTGCACCTGGTTCTATGAA  100
       ||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  TTCTACAACCCTGAAATGCAAAGGTGTGGCTGTGCACCTGGTTCTATGCA  100

seq1  CCTGTGTGGACTTCCATTGGCTACAAGGTTGTGGGAAGAAGCAGCAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGGACTTCCATTGGCTACAAGGTTGTGGGAAGAAGCAGCAAGAG  150

seq1  GCTTGCAGCAAACAGGTGCCTCCAATAAGTTTTCCTACAAA-GAAAGGAC  199
      |||| |||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCTTTCAGCAAACAGGTGCCTCCAATAAGTTTTCCTACAAAGGAAAGGAC  200

seq1  TTTGCCCTAAGGAGGTTCAGTGGGTGGAGGTCACATGGCTGGGTGGCCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCTAAGGAGGTTCAGTGGGTGGAGGTCACATGGCTGGGTGGCCAT  250

seq1  TTTGCAGTATGAGGAAATGTATGAGGAGAACAGATTCCATCCTGTTTTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTATGAGGAAATGTATGAGGAGAACAGATTCCATCCTGTTTTGT  300

seq1  TTGTTGGTTTACTTAGTTGGTTTTGGTGTTGGTGTTGGTGTTGGTTGTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGTTTACTTAGTTGGTTTTGGTGTTGGTGTTGGTGTTGGTTGTGG  350

seq1  TTTTGCTTTTGGTTGTTTGATTGATTGATTTCATTTACATAGATAGATAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTTGGTTGTTTGATTGATTGATTTCATTTACATAGATAGATAG  400

seq1  ATTGATAGATAGAGAGATATGTAAATTTTTTCCATCAGGTCTTTGTTTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAGATAGAGAGATATGTAAATTTTTTCCATCAGGTCTTTGTTTGG  450

seq1  AGGCCTACAGGAAATCTTGAGATTTGGCGACTGGGCGTGGCTTCCATGCC  499
      |||||||||||||||||||| | |||||||||||||||||||||||||||
seq2  AGGCCTACAGGAAATCTTGATA-TTGGCGACTGGGCGTGGCTTCCATGCC  499

seq1  TGTGTGTGGCA  510
      ||| |||||||
seq2  TGTTTGTGGCA  510