BAC Information

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BAC

Clone NameB6Ng01-069O03
Chromosome8 (Build37)
Map Location 111,462,540 - 111,462,953
singlet/doubletsinglet
Overlap geneAtbf1
Upstream genenone
Downstream gene4922502B01Rik, Gm1943, LOC100042829, Pmfbp1, Dhx38, Txnl4b, Hp, Dhodh, Pkd1l3, 2400003C14Rik, 4930566A11Rik, D8Ertd587e, LOC668089, LOC672735, Ap1g1, Phlppl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069O03.bB6Ng01-069O03.g
ACCDH888051DH888052
length1,285408
definitionDH888051|Mus musculus domesticus DNA, BAC clone: B6Ng01-069O03, 5' end.DH888052|Mus musculus domesticus DNA, BAC clone: B6Ng01-069O03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccactaggcaatatatagctaccatactctaccataaaccaga
gaaggcaacaggagccaaggaacaaagcatccagctacccaacaaagaaa
agaagatatcagcaccagcaccaagaattacaatttttccaaacacagat
gcctaagtgccaacgtagaaacacaataagagctgggacaatatgcctcc
attagagcccagcaatcctaccagagcaggccctgagtactgcaacatag
ctgaagcaaaaaaaaaaaaaaaaaaaaaaaaaatccaggaaatctagact
actatgaaaagactaaatctaagaataataaaaatagagaaagaaaaaga
aacccgggtcaaaggcacagaaaatatttttaacaaattatagatgaaaa
ttccctaacttaaggaagggatgcctctcagagtacaagaagcatacaaa
acacccaaacagactacaccaaaaaaagactgtccctttgcacatagtaa
tcaaaacaataaaagcacagaacaaataaagaaatattaaaagctgcaag
ggaaaaagaccaagtaatatattaaagcatattgattagactaacacttg
gctcttcagtggagattctacaagccagcacagaccactatacccagcaa
aacattctatcacaatagatgaaaaataaggcattccaggataaaaaaaa
attaaccaatatttatttatactctatggaaggtgtagaaggaaatctcc
aacctaaaaaggctaaccacacccaagaaaacataaagaataaaaaattt
cagacagcaattaaaagaattgaaatgcacacagatacacataccacaaa
aaaaacactgatcatcgatgtctcccaacattagtggtttcagtaccaca
ataaaaagacagagactaataggatggaaaacaaacaaaacaaacaaaaa
caaaaacaaaaacaacagggtccacttccctgctacatccaggaaagaca
ccttaacatcaaggttaactgaggcagcgtaaacagggctcgggtggcat
cccaccaggtcttctttaaaagggcttaagcaaatgaagaacggaagaac
atacagattctctcagttctggaaactggggagttacaggtgctcatcat
gcggagagaactggcatctaactgtgaggagagaggagtgtagagaggca
tggcagaaggttagtaaagacctgggcatgaactgccaacgtgagagttg
acagatcctttactacacgtacactattcggccag
caagttccaggcggggaggaagacagcatcccggtgttctgttccacagt
ttgccaactgtcccgtattctgttgtacagtaggccaactacatacagtc
aaccccagtatatattttggacataagagaagccttttaatgtctcatga
agagataaatgctggaggagacacatatgctggggtcctcctgtgatgag
cacacagagtatatgtgtgtgaaacttcaccctgagccccataaatctat
acagttatacgcaacaattaaaatttcctgaaagcagtacagctggtaca
catcgttataatcccagcactcaggcagggggattatgagttggaggttt
gccttgggggatatgagactttaggtcttaaaaagtttaaaatttaaaag
tatactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_111462540_111462953
seq2: B6Ng01-069O03.g_69_482

seq1  GAATTCCAAGTTCCAGGCGGGGAGGAAGACAGCATCCCGGTGTTCTGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTTCCAGGCGGGGAGGAAGACAGCATCCCGGTGTTCTGTTC  50

seq1  CACAGTAAGCCAACTGTCCCGTATTCTGTTGTACAGTAGGCCAACTACAT  100
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTGCCAACTGTCCCGTATTCTGTTGTACAGTAGGCCAACTACAT  100

seq1  ACAGTCAACCCCAGTATATATTTTGGACATAAGAGAAGCCTTTTAATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAACCCCAGTATATATTTTGGACATAAGAGAAGCCTTTTAATGTC  150

seq1  TCATGAAGAGATAAATGCTGGAGGAGACACATATGCTGGGGTCCTCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAGAGATAAATGCTGGAGGAGACACATATGCTGGGGTCCTCCTGT  200

seq1  GATGAGCACACAGAGTATATGTGTGTGAAACTTCACCCTGAGCCCCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCACACAGAGTATATGTGTGTGAAACTTCACCCTGAGCCCCATAA  250

seq1  ATCTATACAGTTATACGCAACAATTAAAATTTCCTGAAAGCAGTACAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATACAGTTATACGCAACAATTAAAATTTCCTGAAAGCAGTACAGCT  300

seq1  GGTACACATCGTTATAATCCCAGCACTCAGGCAGGGGGATTATGAGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACATCGTTATAATCCCAGCACTCAGGCAGGGGGATTATGAGTTGG  350

seq1  AGGTTTGCCTTGGGGGATATGAGACTTTAGGTCTTAAAAAGTAAAAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  AGGTTTGCCTTGGGGGATATGAGACTTTAGGTCTTAAAAAGTTTAAAATT  400

seq1  TAAAAGTATACTAT  414
      ||||||||||||||
seq2  TAAAAGTATACTAT  414