BAC Information

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BAC

Clone NameB6Ng01-070P02
Chromosome8 (Build37)
Map Location 7,709,569 - 7,710,762
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665127, EG546032
Downstream geneLOC100039836, Efnb2, 9430010O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070P02.bB6Ng01-070P02.g
ACCDH888786DH888787
length1,1761,234
definitionDH888786|Mus musculus domesticus DNA, BAC clone: B6Ng01-070P02, 5' end.DH888787|Mus musculus domesticus DNA, BAC clone: B6Ng01-070P02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcagggttaggagtgaaatatcatcatgaaaactaaggtctg
ttagagctttcctgatgggctcataaaagagattatgtttgaaagtgtct
aatgtgataaaatgaatttatcagcctcatcttatttcttttattttgac
acatatggaagatgctgctttgttttgacactcacaagagttgttctttt
tttattaaaaataactcaacagtaatgagatttgaggaaactctcttagc
atatctctttaacagcaggcaactggatcctgaagattcacagtacactg
ggtgactgtgggtatgtgcagtgtgtccacatgtgctcaagagtcactca
tctctatttgtctcttttaagctgtaatgagtagctcttctcttggcaac
atgttccctggacaaaaacatgaactctggaactgcacagcaaggaggag
atggagacaccgacaccagcagtgtctttgcagcttagtaccatgggtgt
taacacactccagaacaggccagtattcctccagtatggctaggcatggt
gatgtcatagcaagtcatgttgatgtatacagaagtacatgtgaggagca
ttgggatacagaaatcaacctgttcataggattaggtaagaattgttact
gtacccaacatcaggaaacatgttctctgtttgaaatgaaagcattcttc
atagtgtgtagaaagtacttctgtaggcttagatatttcagaacctactt
tgtatgggttctcaaatgtttgggcctcccttctagcctactgtccaaag
gtagtggagaaaagacggtaaataggacaagagaatttgaacatgtttag
aagtgttttagcctaggcaatggtggctcacacctgtaatcccagcactt
gggaggcagaggcaggcagattcctgatttcaaggccaaccagatctaca
aagtgagttccaggacagccagggctgtacagagaaaccctgtcttgaaa
aaaaagtgttttgggaggccattccaaacttagttaccagcagtccagtt
cagtagtgtcagataccagagtccagttcaaagtgtcacaatataatcag
caggggcacaggcctcccatgatcagcatgagtcagtcagagtcagccga
tgcagaaagtactttgccatgtcttt
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
tttcaaggtccgccctatgcggagcccccgccctgcgtagtgcgtcagca
atgcgcagagagatgcgcagagaggcagtgcgcagactcattcattccca
gagaggaacaaaggaaaatacaacaggcatttccagtctttgaaggagcc
gagggtgggcgtgtccacgctccggtagaatacttacaaattaaagaaat
tgccgagtcggtccgtaaatacggaaccaatgctaattttaccttggtgc
agttagacaggctcgccggcatggcactaactcctgctgactggcaaacg
gttgtaaaagccgctctccctagtatgggcaaatatatggaatggagagc
tctttggcatgaagctgcacaagcgcaggcccgagcaaacgcagctgctt
tgactccagagcagagagattggacttttgacttgttaacgggtcaggga
gcttattctgctgatcagacaaactaccattggggagcttatgcccagat
ttcttccacggctattagggcctggaaggcgctctcccgagcaggtgaaa
ccactggtcagttaacaaagataatccagggacctcaggaatccttctca
gattttgtggccagaatgacagaggcagcagagcgtatttttggagagtc
agagcaagctgcgcctctgatagaacagctaatctatgagcaagccacaa
aggagtgccgagcggccatagccccaagaaagaacaaaggcttacaagac
tggctcaggtctgtcgagagcttgggggacctccccaccaatgcaggctt
agcggccgccatcctccaatctcagaaccgctccatgggcagaaataatc
agaggacatgttttacctgccgaaagcctgggcatttaagaaagattgca
gagcctccagattacaggaggacctcccacctctttgcctctagtgtggc
cagtatcatagagcctgaccagtgttccgcttctgtgaggattaagccag
gttccttccccactgtatgtcatcagctatgtgctaaccgtcaactcgcc
ctctgtctccaaggccctctcaaagaatatagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_7709569_7710762
seq2: B6Ng01-070P02.b_43_1218 (reverse)

seq1  AAAGACATGGCAAAGTACTTTTCCTGGCATTCTGGCTGACTCTGACCTGA  50
      |||||||||||||||||||||  || ||||   |||||||||||| ||||
seq2  AAAGACATGGCAAAGTACTTT--CT-GCAT--CGGCTGACTCTGA-CTGA  44

seq1  CTCATGCTGATTCTGTGGAGGCCTGGTTGCCCCCTGCTGATTTATATTTG  100
      |||||||||||  || |||||||||  || |||||||||| |||||||  
seq2  CTCATGCTGATCATG-GGAGGCCTG--TG-CCCCTGCTGA-TTATATT--  87

seq1  GTGACACTTTTGAACTGGACTCTTGGTATTCTGACACTACTGAACTGGAC  150
      ||||||| |||||||||||||| ||||| |||||||||||||||||||||
seq2  GTGACAC-TTTGAACTGGACTC-TGGTA-TCTGACACTACTGAACTGGAC  134

seq1  TGCTGGTAACTAAGTTTGGAATGGCCCTCCCAAAACACTTTTTTTTTCAA  200
      |||||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  TGCTGGTAACTAAGTTTGGAATGG-CCTCCCAAAACAC-TTTTTTTTCAA  182

seq1  GACAGGGTTTCTCTGTACAGCCCTGGCTGTCCTGGAACTCACTTTGTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTTTCTCTGTACAGCCCTGGCTGTCCTGGAACTCACTTTGTAGA  232

seq1  TCTGGTTGGCCTTGAAATCAGGAATCTGCCTGCCTCTGCCTCCCAAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTGGCCTTGAAATCAGGAATCTGCCTGCCTCTGCCTCCCAAGTGC  282

seq1  TGGGATTACAGGTGTGAGCCACCATTGCCTAGGCTAAAACACTTCTAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTACAGGTGTGAGCCACCATTGCCTAGGCTAAAACACTTCTAAAC  332

seq1  ATGTTCAAATTCTCTTGTCCTATTTACCGTCTTTTCTCCACTACCTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAAATTCTCTTGTCCTATTTACCGTCTTTTCTCCACTACCTTTGG  382

seq1  ACAGTAGGCTAGAAGGGAGGCCCAAACATTTGAGAACCCATACAAAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGGCTAGAAGGGAGGCCCAAACATTTGAGAACCCATACAAAGTAG  432

seq1  GTTCTGAAATATCTAAGCCTACAGAAGTACTTTCTACACACTATGAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAATATCTAAGCCTACAGAAGTACTTTCTACACACTATGAAGAA  482

seq1  TGCTTTCATTTCAAACAGAGAACATGTTTCCTGATGTTGGGTACAGTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCATTTCAAACAGAGAACATGTTTCCTGATGTTGGGTACAGTAAC  532

seq1  AATTCTTACCTAATCCTATGAACAGGTTGATTTCTGTATCCCAATGCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTACCTAATCCTATGAACAGGTTGATTTCTGTATCCCAATGCTCC  582

seq1  TCACATGTACTTCTGTATACATCAACATGACTTGCTATGACATCACCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGTACTTCTGTATACATCAACATGACTTGCTATGACATCACCATG  632

seq1  CCTAGCCATACTGGAGGAATACTGGCCTGTTCTGGAGTGTGTTAACACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCATACTGGAGGAATACTGGCCTGTTCTGGAGTGTGTTAACACCC  682

seq1  ATGGTACTAAGCTGCAAAGACACTGCTGGTGTCGGTGTCTCCATCTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTACTAAGCTGCAAAGACACTGCTGGTGTCGGTGTCTCCATCTCCTC  732

seq1  CTTGCTGTGCAGTTCCAGAGTTCATGTTTTTGTCCAGGGAACATGTTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGTGCAGTTCCAGAGTTCATGTTTTTGTCCAGGGAACATGTTGCC  782

seq1  AAGAGAAGAGCTACTCATTACAGCTTAAAAGAGACAAATAGAGATGAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAGCTACTCATTACAGCTTAAAAGAGACAAATAGAGATGAGTG  832

seq1  ACTCTTGAGCACATGTGGACACACTGCACATACCCACAGTCACCCAGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGAGCACATGTGGACACACTGCACATACCCACAGTCACCCAGTGT  882

seq1  ACTGTGAATCTTCAGGATCCAGTTGCCTGCTGTTAAAGAGATATGCTAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAATCTTCAGGATCCAGTTGCCTGCTGTTAAAGAGATATGCTAAG  932

seq1  AGAGTTTCCTCAAATCTCATTACTGTTGAGTTATTTTTAATAAAAAAAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTCCTCAAATCTCATTACTGTTGAGTTATTTTTAATAAAAAAAGA  982

seq1  ACAACTCTTGTGAGTGTCAAAACAAAGCAGCATCTTCCATATGTGTCAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCTTGTGAGTGTCAAAACAAAGCAGCATCTTCCATATGTGTCAAA  1032

seq1  ATAAAAGAAATAAGATGAGGCTGATAAATTCATTTTATCACATTAGACAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAATAAGATGAGGCTGATAAATTCATTTTATCACATTAGACAC  1082

seq1  TTTCAAACATAATCTCTTTTATGAGCCCATCAGGAAAGCTCTAACAGACC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACATAATCTCTTTTATGAGCCCATCAGGAAAGCTCTAACAGACC  1132

seq1  TTAGTTTTCATGATGATATTTCACTCCTAACCCTGAGAGAATTC  1194
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTCATGATGATATTTCACTCCTAACCCTGAGAGAATTC  1176