BAC Information

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BAC

Clone NameB6Ng01-071F23
Chromosome8 (Build37)
Map Location 45,259,727 - 45,408,322
singlet/doubletdoublet
Overlap genenone
Upstream geneEG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Downstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071F23.bB6Ng01-071F23.g
ACCDH889091DH889092
length1831,142
definitionDH889091|Mus musculus domesticus DNA, BAC clone: B6Ng01-071F23, 5' end.DH889092|Mus musculus domesticus DNA, BAC clone: B6Ng01-071F23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,408,140 - 45,408,322)(45,259,727 - 45,260,883)
sequence
gaattcagcaatctgacagctcagttgattgcctcttttacctcactccc
aaattgatatgtttcagcgtgggaggatagatgtacattttaaatactga
catttctatatcactataaaagtactctctctctctcatatgtgtgtgtg
tgtgtgtgtgtgtgagagagagagagagagaga
gaattcccatggaaaattggctggaattggaataagagataactggctga
gaagtagggaggaagtctgtagaggtaagatttgagtgatccactggaat
tggtggtctgttacagagctgttagtaacattggggaatataatttggaa
gaaagtagggagagataaaatctgcaattagggtacatgcttctctgacc
agagtggctagttttcacatcttaaagcaattgttaaaatatattattcc
tttgaatgcagtacactgccagggaacacttggaactgactttagtatat
ctttgtgattatgaaatttgtaactggatttttcatcttgccccaataaa
ggactatgaaaaagaactcagaggtgtaaataacatcttccagaaacagc
cagacttatatttactcctaaatgtgatagcatggtactgattcaatccc
attcttcaattttaaatgtttttttttaagtttagattgtttctaacaag
aaaaatataacatatattatataggactataattcctgcatattttgtcc
tatcatctgctaaagcttcaactaagtatgtcctttatgctatgcctaaa
tattcattaaggtctagcattttgcatttgttgaggaagcaaatttatta
gctgaataagactctaagaatttgaagtgattgcattttgaaaggatcat
aattttaaaatgtattgacttcaagatgttcggtttaaaagcttttgtat
tttacatattttattcatgtatattttacaattaatgttcttgttttgag
caaaatttgatgtgtccttcgcccaatattacttttgtcaggaatggttc
cccctgacacttttgcttgcaatcagattttaaaatctagagttaaagct
ttagaagaatcagatatttaagaaaacaaaacagcccccttgcatttttc
atatttctagagtactatggtcttagattttcttgggagcatattgaaag
acttacactgttttttaccaatatcagaagtaaatttctaagcttagaaa
tatttgcaaaacatcttagttttccatgaagtagaagggaatatcatcca
caacatttattgagctcttaagtgtttgggatagatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45408140_45408322
seq2: B6Ng01-071F23.b_42_224 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACATATGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACATATGAGA  50

seq1  GAGAGAGAGTACTTTTATAGTGATATAGAAATGTCAGTATTTAAAATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGTACTTTTATAGTGATATAGAAATGTCAGTATTTAAAATGTA  100

seq1  CATCTATCCTCCCACGCTGAAACATATCAATTTGGGAGTGAGGTAAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATCCTCCCACGCTGAAACATATCAATTTGGGAGTGAGGTAAAAGA  150

seq1  GGCAATCAACTGAGCTGTCAGATTGCTGAATTC  183
      |||||||||||||||||||||||||||||||||
seq2  GGCAATCAACTGAGCTGTCAGATTGCTGAATTC  183

seq1: chr8_45259727_45260883
seq2: B6Ng01-071F23.g_69_1210

seq1  GAATTCCCATGGAAAATTGGCTGGAATTGGAATAAGAGATAACTGGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGGAAAATTGGCTGGAATTGGAATAAGAGATAACTGGCTGA  50

seq1  GAAGTAGGGAGGAAGTCTGTAGAGGTAAGATTTGAGTGATCCACTGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGGGAGGAAGTCTGTAGAGGTAAGATTTGAGTGATCCACTGGAAT  100

seq1  TGGTGGTCTGTTACAGAGCTGTTAGTAACATTGGGGAATATAATTTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTCTGTTACAGAGCTGTTAGTAACATTGGGGAATATAATTTGGAA  150

seq1  GAAAGTAGGGAGAGATAAAATCTGCAATTAGGGTACATGCTTCTCTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAGGGAGAGATAAAATCTGCAATTAGGGTACATGCTTCTCTGACC  200

seq1  AGAGTGGCTAGTTTTCACATCTTAAAGCAATTGTTAAAATATATTATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGCTAGTTTTCACATCTTAAAGCAATTGTTAAAATATATTATTCC  250

seq1  TTTGAATGCAGTACACTGCCAGGGAACACTTGGAACTGACTTTAGTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGCAGTACACTGCCAGGGAACACTTGGAACTGACTTTAGTATAT  300

seq1  CTTTGTGATTATGAAATTTGTAACTGGATTTTTCATCTTGCCCCAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGATTATGAAATTTGTAACTGGATTTTTCATCTTGCCCCAATAAA  350

seq1  GGACTATGAAAAAGAACTCAGAGGTGTAAATAACATCTTCCAGAAACAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTATGAAAAAGAACTCAGAGGTGTAAATAACATCTTCCAGAAACAGC  400

seq1  CAGACTTATATTTACTCCTAAATGTGATAGCATGGTACTGATTCAATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTATATTTACTCCTAAATGTGATAGCATGGTACTGATTCAATCCC  450

seq1  ATTCTTCAATTTTAAATGTTTTTTTTTAAGTTTAGATTGTTTCTAACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCAATTTTAAATGTTTTTTTTTAAGTTTAGATTGTTTCTAACAAG  500

seq1  AAAAATATAACATATATTATATAGGACTATAATTCCTGCATATTTTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAACATATATTATATAGGACTATAATTCCTGCATATTTTGTCC  550

seq1  TATCATCTGCTAAAGCTTCAACTAAGTATGTCCTTTATGCTATGCCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCTGCTAAAGCTTCAACTAAGTATGTCCTTTATGCTATGCCTAAA  600

seq1  TATTCATTAAGGTCTAGCATTTTGCATTTGTTGAGGAAGCAAATTTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTAAGGTCTAGCATTTTGCATTTGTTGAGGAAGCAAATTTATTA  650

seq1  GCTGAATAAGACTCTAAGAATTTGAAGTGATTGCATTTTGAAAGGATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATAAGACTCTAAGAATTTGAAGTGATTGCATTTTGAAAGGATCAT  700

seq1  AATTTTAAAATGTATTGACTTCAAGATGTTCGGTTTAAAAGCTTTTGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAAATGTATTGACTTCAAGATGTTCGGTTTAAAAGCTTTTGTAT  750

seq1  TTTACATATTTTATTCATGTATATTTTACAATTAATGTTCTTGTTTTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATATTTTATTCATGTATATTTTACAATTAATGTTCTTGTTTTGAG  800

seq1  CAAAATTTGATGTGTCCTTCGCCCAATATTACTTTTGTCAGGAATGGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTGATGTGTCCTTCGCCCAATATTACTTTTGTCAGGAATGGTTC  850

seq1  CCCCTGACACTTTTGCTTGCAATCAGATTTTAAAATCTAGAGTTAAAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGACACTTTTGCTTGCAATCAGATTTTAAAATCTAGAGTTAAAGCT  900

seq1  TTAGAAGAATCAGATAATTTAAGAAAACAAAACAGGCCCCCTTGCATTTT  950
      ||||||||||||||| |||||||||||||||||| |||||||||||||||
seq2  TTAGAAGAATCAGAT-ATTTAAGAAAACAAAACA-GCCCCCTTGCATTTT  948

seq1  TCAATATTTCTAAGAAGTACTATGGTCTTAGATTTTCTTGGGAGCATATT  1000
      || |||||||||   |||||||||||||||||||||||||||||||||||
seq2  TC-ATATTTCTA--GAGTACTATGGTCTTAGATTTTCTTGGGAGCATATT  995

seq1  GAAAGGACTTACACTG-TTTCTACCAATATCAAGAAGTTAAAATATCTAA  1049
      |||| ||||||||||| ||| |||||||||| ||||||  |||| |||||
seq2  GAAA-GACTTACACTGTTTTTTACCAATATC-AGAAGT--AAATTTCTAA  1041

seq1  GCTTAGAAATATTGCAAAAACATCTTAAGTTTTCCCAATTGAGGTAGAAG  1099
      |||||||||||||   |||||||||| ||||||||    ||| |||||||
seq2  GCTTAGAAATATTTGCAAAACATCTT-AGTTTTCC---ATGAAGTAGAAG  1087

seq1  GGAAATTATCAATCAACAACATTTATTGAGCTCTTAGAGTGTTGGGGATA  1149
      ||||  |||| ||| ||||||||||||||||||||| |||||| ||||||
seq2  GGAA--TATC-ATCCACAACATTTATTGAGCTCTTA-AGTGTTTGGGATA  1133

seq1  GAT-TATAT  1157
      ||| |||||
seq2  GATATATAT  1142