BAC Information

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BAC

Clone NameB6Ng01-072E17
Chromosome8 (Build37)
Map Location 46,516,531 - 46,714,132
singlet/doubletdoublet
Overlap geneSorbs2
Upstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3
Downstream genePdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37, Lrp2bp, Snx25, 4933411K20Rik, Slc25a4, LOC621269, LOC100039875, LOC667325, Helt, LOC667337, Acsl1, Mlf1ip, Ccdc111, Casp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072E17.bB6Ng01-072E17.g
ACCDH889751DH889752
length3821,014
definitionDH889751|Mus musculus domesticus DNA, BAC clone: B6Ng01-072E17, 5' end.DH889752|Mus musculus domesticus DNA, BAC clone: B6Ng01-072E17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,713,751 - 46,714,132)(46,516,531 - 46,517,377)
sequence
gaattccctcctttaaaggtgtgcataggtgtaaagatttaaaacattta
tgaggattaaaaacaaatgttccccagcttgccttctgcgggtttgctgt
gtagttcttttaacgtgtcaaagggcaagtcacaaaagaatccattgttc
tggcggagagaaaggttattattggctatcaggtctgtccagaaagacaa
gccatgatagtttgttaaaacagtaaatatttattttaaatcctaaccca
aaacagcagagcttttttccccctttatcgtacaatttctggaacctcaa
ctcaccgagttaactctgtatctgaaccactaatttgtggaagtagtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctctactttgctctccaggtgccttctgtcctttctacctgatgt
aagaatctgaattggtatctgtctgaatactgtcttgtgagtctatccct
ctgtctgttcctgtgtgtctgtccatgtctaggtgtgtatgtctgtctct
aacaaagggctttgttccatgacaattgaaaagtgtagaaaacatcatgt
agggaagggatgggatattttatagaaatatttagctgagttttatgagg
gattaaatccctgactccaaagccccgcagtattattagcaacattgttt
ctccagcaacaattgtctgttgtctgctgatggtagatggtcatcatata
agactgctttcaacctctatttgctctactttcaacaacttattattaga
ccacccatccattactctgggtaagggtcaggcaagaatatgtaacaaag
ttacagttatgcaataagttaggttgtgaaatctaagtcaagtaagatgg
gttgttctataattctctaagagcaggttaaacaaacagctggagtatac
aatcggaaagcagtcttacatcatttgtgatctcaaaatgttttattaac
tatgtctgtgaggcccagagttacattcatgtaagagatattttcatagt
atcgcatcaccacagaaaatcaggtgtgttagagtcttgagattactgta
ttgattctgaaattcgatttgtagatatagccacaagaatgaaaaaacag
agacttaagcatatgtgtgaatactagcaactatagcagcattgttgata
atagccaaaaggtggaaatagcccatatctattgatgaatgtttagataa
gcaaaatgtggtatttacataagtcagaaattcatcttaaaatagaagtg
caatcctcatatttattcatggcaacgtgggtggacctttgaaaacacta
ttaccaagtgaaataaagctgacttgaaaacctgctactgcataattccc
ttgttgattaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_46713751_46714132
seq2: B6Ng01-072E17.b_44_425 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACTACTTCCACAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACTACTTCCACAAAT  50

seq1  TAGTGGTTCAGATACAGAGTTAACTCGGTGAGTTGAGGTTCCAGAAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTTCAGATACAGAGTTAACTCGGTGAGTTGAGGTTCCAGAAATTG  100

seq1  TACGATAAAGGGGGAAAAAAGCTCTGCTGTTTTGGGTTAGGATTTAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATAAAGGGGGAAAAAAGCTCTGCTGTTTTGGGTTAGGATTTAAAAT  150

seq1  AAATATTTACTGTTTTAACAAACTATCATGGCTTGTCTTTCTGGACAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTACTGTTTTAACAAACTATCATGGCTTGTCTTTCTGGACAGAC  200

seq1  CTGATAGCCAATAATAACCTTTCTCTCCGCCAGAACAATGGATTCTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAGCCAATAATAACCTTTCTCTCCGCCAGAACAATGGATTCTTTTG  250

seq1  TGACTTGCCCTTTGACACGTTAAAAGAACTACACAGCAAACCCGCAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGCCCTTTGACACGTTAAAAGAACTACACAGCAAACCCGCAGAAG  300

seq1  GCAAGCTGGGGAACATTTGTTTTTAATCCTCATAAATGTTTTAAATCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTGGGGAACATTTGTTTTTAATCCTCATAAATGTTTTAAATCTTT  350

seq1  ACACCTATGCACACCTTTAAAGGAGGGAATTC  382
      ||||||||||||||||||||||||||||||||
seq2  ACACCTATGCACACCTTTAAAGGAGGGAATTC  382

seq1: chr8_46516531_46517377
seq2: B6Ng01-072E17.g_234_1083

seq1  TTCCATGACAATTGAAAAGTGTAGAAAACATCATGTAGGGAAGGGATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGACAATTGAAAAGTGTAGAAAACATCATGTAGGGAAGGGATGGG  50

seq1  ATATTTTATAGAAATATTTAGCTGAGTTTTATGAGGGATTAAATCCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATAGAAATATTTAGCTGAGTTTTATGAGGGATTAAATCCCTGA  100

seq1  CTCCAAAGCCCCGCAGTATTATTAGCAACATTGTTTCTCCAGCAACAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAGCCCCGCAGTATTATTAGCAACATTGTTTCTCCAGCAACAATT  150

seq1  GTCTGTTGTCTGCTGATGGTAGATGGTCATCATATAAGACTGCTTTCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTGTCTGCTGATGGTAGATGGTCATCATATAAGACTGCTTTCAAC  200

seq1  CTCTATTTGCTCTACTTTCAACAACTTATTATTAGACCACCCATCCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTTGCTCTACTTTCAACAACTTATTATTAGACCACCCATCCATTA  250

seq1  CTCTGGGTAAGGGTCAGGCAAGAATATGTAACAAAGTTACAGTTATGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGTAAGGGTCAGGCAAGAATATGTAACAAAGTTACAGTTATGCAA  300

seq1  TAAGTTAGGTTGTGAAATCTAAGTCAAGTAAGATGGGTTGTTCTATAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAGGTTGTGAAATCTAAGTCAAGTAAGATGGGTTGTTCTATAATT  350

seq1  CTCTAAGAGCAGGTTAAACAAACAGCTGGAGTATACAATCGGAAAGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGAGCAGGTTAAACAAACAGCTGGAGTATACAATCGGAAAGCAGT  400

seq1  CTTACATCATTTGTGATCTCAAAATGTTTTATTAACTATGTCTGTGAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATCATTTGTGATCTCAAAATGTTTTATTAACTATGTCTGTGAGGC  450

seq1  CCAGAGTTACATTCATGTAAGAGATATTTTCATAGTATCGCATCACCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTACATTCATGTAAGAGATATTTTCATAGTATCGCATCACCACA  500

seq1  GAAAATCAGGTGTGTTAGAGTCTTGAGATTACTGTA-TGATTCTGAAATT  549
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAAAATCAGGTGTGTTAGAGTCTTGAGATTACTGTATTGATTCTGAAATT  550

seq1  CGATTTGTAGATATAGCCACAAGAATGAAAAAACAGAGACTTAAGCATAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTGTAGATATAGCCACAAGAATGAAAAAACAGAGACTTAAGCATAT  600

seq1  GTGTGAATACTAGCAACTATAGCAGCATTGTTGATAATAGCCAAAAGGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAATACTAGCAACTATAGCAGCATTGTTGATAATAGCCAAAAGGTG  650

seq1  GAAATAGCCCATATCTATTGATGAATGTTTAGATAAGCAAAATGTGGTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCCCATATCTATTGATGAATGTTTAGATAAGCAAAATGTGGTAT  700

seq1  ATACATAAGTCAGAAATTCATCTTAAAAAAGAAGTGCAATCCTCATATTT  749
       ||||||||||||||||||||||||||| |||||||||||||||||| ||
seq2  TTACATAAGTCAGAAATTCATCTTAAAATAGAAGTGCAATCCTCATA-TT  749

seq1  TATTCATGGCAACGTGGGTGGACC-TTGAAAACACTA-TACCAAGTGAAA  797
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  TATTCATGGCAACGTGGGTGGACCTTTGAAAACACTATTACCAAGTGAAA  799

seq1  TAAAGCTGACTTGAAAA-CTGCTACTGCATAATTCCCTTGTTGATTAAAA  846
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAAAGCTGACTTGAAAACCTGCTACTGCATAATTCCCTTGTTGATTAAAA  849

seq1  T  847
      |
seq2  T  850