BAC Information

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BAC

Clone NameB6Ng01-072I14
Chromosome8 (Build37)
Map Location 6,116,209 - 6,116,760
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC434275, LOC623409, LOC669429, LOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072I14.bB6Ng01-072I14.g
ACCDH889928DH889929
length1,254942
definitionDH889928|Mus musculus domesticus DNA, BAC clone: B6Ng01-072I14, 5' end.DH889929|Mus musculus domesticus DNA, BAC clone: B6Ng01-072I14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccatttgggtgtcaacctccctcactttcttccatcccatata
ccacctcccctaccctccctacaccactaatcaagtttctataggactag
acaaattctttcccattgagctcaaagctgtgcatttgtgggtgcaggat
ccacagttaggtaggcagctggctcagggactgatccttctgcagttgtt
ttggggacctgcatgaagaccaaactgctcatctgctacatatgtgcagg
acacctaggtactctctttgtttggtgagtcagtctcagggagttcttaa
gggtccaggttagttgactgtgttggtcttcctatggtgttgctgtcctc
tttgggtccctcaatctttcttccaactctcagaagctccatccactgtt
tgggtgtgaatctctgaatctctttccattggctggagactctcagagga
cagttatgctagattcctgtctacaagtataacagagtatcatccacagt
gttggagatttgttcttgcccttgagataggtctcagtttggggcagtca
ttattgggccatatcctcagcctctgctctatctttgtctttgcacatat
tgtaggcagggcacattctgggtggaaggttttatgagtgggttgctgtc
ctatcctcctactgggagagttgcccagctacagaagtaggcacttcagg
atccatatcccccactgctaggaacttcagctagagtcacccccttaggc
cttcctgggctgctccccattgcagatctctggcatgtcctagagattgc
cctggtctccgggtgatcttccttttctttctcctgttctctctgtatca
tcctgccctgtcccctcttagactcattttcccccaaccatccacctgtg
atatctatttatttccccttatgagaaagagtgaactatcctcctttgtg
ttcttattatttggctcattagagtctgttgattgtacattcttatcctg
tactttatggttaataccaccttaataactggagtatataaccatgcaag
tccttttgggattggtacctcaatcagatgtttatttttctaaggttcca
tccatttactgttgcaatctatatccttgggtgttttatatcaatttcca
ctaaaactagaacccacttatccaatgaacagagtggaattccttaatct
tggtagaatgtctgacgattcatggtctcgcgtaggtcaaatataagggg
aact
gaattctttctttagatctgtgccggtttttaattggattacttgtctcc
tcaatatctaggggacttttaaattttagtttagtttttaaatatatttt
ggacattagctctctattggatgtgaatttgttcaaaatcttttaatatt
ctgaaggctgaaactgtgatttctttccaagtcagtgtttgtgtttgttc
ttcttttttcttggttttattgtcctttgtaatattcataatttttttat
tagagatatctctcaacttttatcccagatagtttttatcataggcactg
actgctttcatgactgtttttattgtatctcacaggtattggcatgttgt
attttcattcaattttaaacattttataatttctttctggattcctttga
tgattgattcatcatttctgtgttatttagtttctttcactgtttgtata
ttctgttgtttttcttgctttgaacatctagtttattccacagtccttaa
atagaatagagaacatcatttcaattttccttcgtggggatgctttatgt
gctatcatgtgatctatgttagagaaagtcttggggcccagaagcatatt
ttgtaacacttggagagtgtcctgtactagctagtaagtctgtttgtcct
ataacataatttaacccaaatacttctctttaaattttttattaggatga
ccagtctatttgttatcctgggtagctgaggacactcactcttgttgtgt
ggggttcttctattattttacatctagtagaacttgtgctatgaaaatgg
gtgaactgtttgatacacactgagaggtataatattctcttgattaaata
tttaaacatgactgtgtgctgatttttattagaactttctggccattgtt
tactcattgctggacttgtttttgataggagaagggggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6116209_6116760
seq2: B6Ng01-072I14.g_456_1007 (reverse)

seq1  TCCT-CCCCTTCTCCCTATCAAAAACAAGTCCAGCAATGAGTAAAACAAT  49
      |||| |||||||| |||||||||||||||||||||||||||| |||||||
seq2  TCCTCCCCCTTCT-CCTATCAAAAACAAGTCCAGCAATGAGT-AAACAAT  48

seq1  GGCCAGAAAGTTCTAATAAAAATCAGCACACAGTCATGTTTAAATATTTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAAAGTTCTAATAAAAATCAGCACACAGTCATGTTTAAATATTTA  98

seq1  ATCAAGAGAATATTATACCTCTCAGTGTGTATCAAACAGTTCACCCATTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAGAATATTATACCTCTCAGTGTGTATCAAACAGTTCACCCATTT  148

seq1  TCATAGCACAAGTTCTACTAGATGTAAAATAATAGAAGAACCCCACACAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCACAAGTTCTACTAGATGTAAAATAATAGAAGAACCCCACACAA  198

seq1  CAAGAGTGAGTGTCCTCAGCTACCCAGGATAACAAATAGACTGGTCATCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTGAGTGTCCTCAGCTACCCAGGATAACAAATAGACTGGTCATCC  248

seq1  TAAT-AAAAATTTAAAGAGAAGTATTTGGGTTAAATTATGTTATAGGACA  298
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAAATTTAAAGAGAAGTATTTGGGTTAAATTATGTTATAGGACA  298

seq1  AACAGACTTACTAGCTAGTACAGGACACTCTCCAAGTGTTACAAAATATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTTACTAGCTAGTACAGGACACTCTCCAAGTGTTACAAAATATG  348

seq1  CTTCTGGGCCCCAAGACTTTCTCTAACATAGATCACATGATAGCACATAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGCCCCAAGACTTTCTCTAACATAGATCACATGATAGCACATAA  398

seq1  AGCATCCCCACGAAGGAAAATTGAAATGATGTTCTCTATTCTATTTAAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCCCACGAAGGAAAATTGAAATGATGTTCTCTATTCTATTTAAGG  448

seq1  ACTGTGGAATAAACTAGATGTTCAAAGCAAGAAAAACAACAGAATATACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGAATAAACTAGATGTTCAAAGCAAGAAAAACAACAGAATATACA  498

seq1  AACAGTGAAAGAAACTAAATAACACAGAAATGATGAATCAATCATCAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGAAAGAAACTAAATAACACAGAAATGATGAATCAATCATCAAAG  548

seq1  GAAT  552
      ||||
seq2  GAAT  552