BAC Information

Click to search

BAC

Clone NameB6Ng01-072L14
Chromosome8 (Build37)
Map Location 82,570,210 - 82,611,378
singlet/doubletdoublet
Overlap geneHhip
Upstream geneD630040G17Rik, 1700011L22Rik, Mmaa, A630049P17, Smad1, LOC666378, LOC666388, LOC666392, Otud4, Tpd52-ps, Abce1, Anapc10, LOC100039439
Downstream geneLOC546075, Gypa, Frem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072L14.bB6Ng01-072L14.g
ACCDH890058DH890059
length1,2311,090
definitionDH890058|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L14, 5' end.DH890059|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,610,131 - 82,611,378)(82,570,210 - 82,571,321)
sequence
gaattctttgaaacaaataaataaaatcagcaatcccatagctaaactta
gagaagaaaaagaaacaccaaataaataaaatcagaactacaagtggaga
cgttacaacagatgtctcagaaataagatgcaccataagagactattgtg
agcaaccgtatgccaataagctggataaccaagaagaaacagacacattt
ctagaaaatgctaatgttgaactgggaagagacagcaagctggagaagcc
cagcaataaatgaagacattggagaagtaattaaaaccttccaccaccac
caacaaagcccaggaccagatggctccatggcttcagtctaacaaacata
ccaagaattattgccaatacttcttacatttttccaaaaatatataacta
aagggaatacttccaaacatattttattaagccatcatcctaatgcctaa
gccagagcaagaaaaaaccctataactcatgtatttaaaaatagtttaac
attttatattaatatgctgtgtgtagcaagaagaaagaaatgcacatggt
tcagcacctctcagtacttcacagaagagtacattggtgggaaggatgca
tacctctaaaagcatttagaaataatgaagagtctgtcactgagtggcta
ctacagttagcatcttgctaaggtttgaaatattaagagtctgtttttct
ctctttgctgcatctacaatgagaataaggatcactctcagcaaccagac
tgttgatatattccagaaaaatgcacagtgtcgttattgtggaaaggccc
cagaggaaccctccagaggggcttcaatcacatcaatatagagctgagtc
tccttgcaaagagaaagaagcagatccaggttgacaaatgattagaaaac
gaagcgactgggccactgcccacaccatctccagccatgttcagaacatg
atcaaggtgttgtgctagactttgtttcaagatgcgcccttgtgagcgcg
ctttcccagcagcccttgtgagcgtgctctccagcatcagtattattcag
aaaacagtctttggttgaatttgaaatttcctgggtgaaaatcaatcgag
aaggttcagaatgacgacgtgtggctgaatctgtttgtcaagcataagga
atgaatagtctgaagaaatgaacatggaacttgtttatcagcaggagctt
cacagtcgaaactggatatacagagaagttt
gaattccatgatactggctacctagtgagcactaaggagcctcctgtctc
actctccacatctctggggttagccctcacgcctctgtgctcagcttttt
acgtgtatactggggattgatctctggccgttatatagcaagcactttac
tgacggaatcattcccccagccccggggcctgcaagaacttttataagta
cagctatccttgtgtatgaaattaaaagctttaggccagagggaaaatac
agaaaattttgacatctatatttgaggtaataagatcctggttttattat
gcttgtcactaagattgcatctgtattctaagtacgcttttatcaggatc
tgggctaaggatataagtgctggagtaattgcccagcaactcaaagccca
ggcttgatattaacactgcaaacaagcaaatatgtacatgaaacctctgc
ttgatctgtttttatcagagtcagctcaggcaagagtctttagtgatcca
gaaaaaggcctctcacccacttctctttactacagtgaagttctcttgtt
tacattacgaattgattttttcactttgcctgctagtcttgggatgaaag
catcaggtaatttagtcggagtttaaaaattataaaacaaattcaggttt
tgaaagaatttctaagaacaagatttggagttcagccaagcaaggtttat
tgatagagtttgcaagacactcaaagctctcttccagtgagcttgacctg
gctcagcccaaacctccgaacaaaccaaccttggggtgaaagtgtcccat
gtgataaagtatgggatacattttgacttcatttttgggtgaaatatatt
acccttaaattgctgacagagactcttcagagcaattactgttaagctgt
tgggaaatggggacgccagaaaagtgtgtgccctcagggtgtatgcacac
agtatacagtttctgtatgtgcctcagagtgtgtgcacacagtatacagg
tactgtgtgtgtctcagaagtgtgtgcacacagtatgcagtactgggtgt
gtctcgagatgtgtgcacacagtatgcaggtactgggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_82610131_82611378
seq2: B6Ng01-072L14.b_43_1273 (reverse)

seq1  AAACTTCTCTG-ATATCCCTGTTTTGGACTGTTGTAGCTTCCTGCTGGAT  49
      ||||||||||| ||||||    ||| ||||| || ||| ||||||| |||
seq2  AAACTTCTCTGTATATCC--AGTTTCGACTG-TGAAGC-TCCTGCT-GAT  45

seq1  TTAGAACAAGTTCAATG-TCATTTCCTTCAAGGACTAATTCAT--CCTAT  96
          ||||||||| ||| |||||| |||||  |||| ||||||  | |||
seq2  ---AAACAAGTTCCATGTTCATTT-CTTCA--GACT-ATTCATTCCTTAT  88

seq1  GGCCTTGACAAACAGATCAAGCCACACTCGTCGTCA-TCTGAACC-TCTC  144
      |  ||||||||||||||  |||||||  |||||||| |||||||| ||||
seq2  G--CTTGACAAACAGATTCAGCCACA--CGTCGTCATTCTGAACCTTCTC  134

seq1  GGATGGATTTTTCACCCAGGAAATTTCAAATTCAACCAAAGACTGGTTCT  194
       ||| || |||||||||||||||||||||||||||||||||||||  | |
seq2  -GATTGA-TTTTCACCCAGGAAATTTCAAATTCAACCAAAGACTG--TTT  180

seq1  CCTGAATAATACTGATGCTGGGAGAGCACGCTCACAAGGGGCTGCTGGGA  244
       |||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  TCTGAATAATACTGATGCT-GGAGAGCACGCTCACAA-GGGCTGCTGGGA  228

seq1  AAGCGCGCTCACAAGGGGCGCATCTTGAAACAAAAGTCTAGCACAACACC  294
      |||||||||||||| |||||||||||||||| |||||||||||||||| |
seq2  AAGCGCGCTCACAA-GGGCGCATCTTGAAAC-AAAGTCTAGCACAACA-C  275

seq1  CTTGATCATGTTCTGAACATGGCTGGAGATGGTGTGGGCAGTGG-CCAGT  343
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTGATCATGTTCTGAACATGGCTGGAGATGGTGTGGGCAGTGGCCCAGT  325

seq1  CGCTTCGTTTTCTAATCATTTGTCAACCTGGATCTGCTTCTTTCTCTTTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTCGTTTTCTAATCATTTGTCAACCTGGATCTGCTTCTTTCTCTTTG  375

seq1  CAAGGAGACTCAGCTCTATATTGATGTGATTGAAGCCCCTCTGGAGGGTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGACTCAGCTCTATATTGATGTGATTGAAGCCCCTCTGGAGGGTT  425

seq1  CCTCTGGGGCC-TTCCACAATAACGACACTGTGCATTTTTCTGGAATATA  492
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGGCCTTTCCACAATAACGACACTGTGCATTTTTCTGGAATATA  475

seq1  TCAACAGTCTGGTTGCTGAGAGTGATCCTTATTCTCATTGTAGATGCAGC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGTCTGGTTGCTGAGAGTGATCCTTATTCTCATTGTAGATGCAGC  525

seq1  AAAGAGAGAAAAACAGACTCTTAATATTTCAAACCTTAGCAAGATGCTAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGAAAAACAGACTCTTAATATTTCAAACCTTAGCAAGATGCTAA  575

seq1  CTGTAGTAGCCACTCAGTGACAGACTCTTCATTATTTCTAAATGCTTTTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTAGCCACTCAGTGACAGACTCTTCATTATTTCTAAATGCTTTTA  625

seq1  GAGGTATGCATCCTTCCCACCAATGTACTCTTCTGTGAAGTACTGAGAGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATGCATCCTTCCCACCAATGTACTCTTCTGTGAAGTACTGAGAGG  675

seq1  TGCTGAACCATGTGCATTTCTTTCTTCTTGCTACACACAGCATATTAATA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAACCATGTGCATTTCTTTCTTCTTGCTACACACAGCATATTAATA  725

seq1  TAAAATGTTAAACTATTTTTAAATACATGAGTTATAGGGTTTTTTCTTGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTTAAACTATTTTTAAATACATGAGTTATAGGGTTTTTTCTTGC  775

seq1  TCTGGCTTAGGCATTAGGATGATGGCTTAATAAAATATGTTTGGAAGTAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTTAGGCATTAGGATGATGGCTTAATAAAATATGTTTGGAAGTAT  825

seq1  TCCCTTTAGTTATATATTTTTGGAAAAATGTAAGAAGTATTGGCAATAAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTAGTTATATATTTTTGGAAAAATGTAAGAAGTATTGGCAATAAT  875

seq1  TCTTGGTATGTTTGTTAGACTGAAGCCATGGAGCCATCTGGTCCTGGGCT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTATGTTTGTTAGACTGAAGCCATGGAGCCATCTGGTCCTGGGCT  925

seq1  TTGTTGGTGGTGGTGGAAGGTTTTAATTACTTCTCCAATGTCTTCATTTA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGTGGTGGTGGAAGGTTTTAATTACTTCTCCAATGTCTTCATTTA  975

seq1  TTGCTGGGCTTCTCCAGCTTGCTGTCTCTTCCCAGTTCAACATTAGCATT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGGCTTCTCCAGCTTGCTGTCTCTTCCCAGTTCAACATTAGCATT  1025

seq1  TTCTAGAAATGTGTCTGTTTCTTCTTGGTTATCCAGCTTATTGGCATACG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAATGTGTCTGTTTCTTCTTGGTTATCCAGCTTATTGGCATACG  1075

seq1  GTTGCTCACAATAGTCTCTTATGGTGCATCTTATTTCTGAGACATCTGTT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCACAATAGTCTCTTATGGTGCATCTTATTTCTGAGACATCTGTT  1125

seq1  GTAACGTCTCCACTTGTAGTTCTGATTTTATTTATTTGGTGTTTCTTTTT  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACGTCTCCACTTGTAGTTCTGATTTTATTTATTTGGTGTTTCTTTTT  1175

seq1  CTTCTCTAAGTTTAGCTATGGGATTGCTGATTTTATTTATTTGTTTCAAA  1242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTAAGTTTAGCTATGGGATTGCTGATTTTATTTATTTGTTTCAAA  1225

seq1  GAATTC  1248
      ||||||
seq2  GAATTC  1231

seq1: chr8_82570210_82571321
seq2: B6Ng01-072L14.g_69_1158

seq1  GAATTCCATGATACTGGCTACCTAGTGAGCACTAAGGAGCCTCCTGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGATACTGGCTACCTAGTGAGCACTAAGGAGCCTCCTGTCTC  50

seq1  ACTCTCCACATCTCTGGGGTTAGCCCTCACGCCTCTGTGCTCAGCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCACATCTCTGGGGTTAGCCCTCACGCCTCTGTGCTCAGCTTTTT  100

seq1  ACGTGTATACTGGGGATTGATCTCTGGCCGTTATATAGCAAGCACTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTATACTGGGGATTGATCTCTGGCCGTTATATAGCAAGCACTTTAC  150

seq1  TGACGGAATCATTCCCCCAGCCCCGGGGCCTGCAAGAACTTTTATAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGGAATCATTCCCCCAGCCCCGGGGCCTGCAAGAACTTTTATAAGTA  200

seq1  CAGCTATCCTTGTGTATGAAATTAAAAGCTTTAGGCCAGAGGGAAAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATCCTTGTGTATGAAATTAAAAGCTTTAGGCCAGAGGGAAAATAC  250

seq1  AGAAAATTTTGACATCTATATTTGAGGTAATAAGATCCTGGTTTTATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTTTGACATCTATATTTGAGGTAATAAGATCCTGGTTTTATTAT  300

seq1  GCTTGTCACTAAGATTGCATCTGTATTCTAAGTACGCTTTTATCAGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCACTAAGATTGCATCTGTATTCTAAGTACGCTTTTATCAGGATC  350

seq1  TGGGCTAAGGATATAAGTGCTGGAGTAATTGCCCAGCAACTCAAAGCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTAAGGATATAAGTGCTGGAGTAATTGCCCAGCAACTCAAAGCCCA  400

seq1  GGCTTGATATTAACACTGCAAACAAGCAAATATGTACATGAAACCTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGATATTAACACTGCAAACAAGCAAATATGTACATGAAACCTCTGC  450

seq1  TTGATCTGTTTTTATCAGAGTCAGCTCAGGCAAGAGTCTTTAGTGATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTGTTTTTATCAGAGTCAGCTCAGGCAAGAGTCTTTAGTGATCCA  500

seq1  GAAAAAGGCCTCTCACCCACTTCTCTTTACTACAGTGAAGTTCTCTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGGCCTCTCACCCACTTCTCTTTACTACAGTGAAGTTCTCTTGTT  550

seq1  TACATTACGAATTGATTTTTTCACTTTGCCTGCTAGTCTTGGGATGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTACGAATTGATTTTTTCACTTTGCCTGCTAGTCTTGGGATGAAAG  600

seq1  CATCAGGTAATTTAGTCGGAGTTTAAAAATTATAAAACAAATTCAGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGTAATTTAGTCGGAGTTTAAAAATTATAAAACAAATTCAGGTTT  650

seq1  TGAAAGAATTTCTAAGAACAAGATTTGGAGTTCAGCCAAGCAAGGTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAATTTCTAAGAACAAGATTTGGAGTTCAGCCAAGCAAGGTTTAT  700

seq1  TGATAGAGTTTGCAAGACACTCAAAGCTCTCTTCCAGTGAGCTTGACCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAGTTTGCAAGACACTCAAAGCTCTCTTCCAGTGAGCTTGACCTG  750

seq1  GCTCAGCCCAAACCTCCGAACAAACCAACCTTGGGGTGAAAGTGTCCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCCCAAACCTCCGAACAAACCAACCTTGGGGTGAAAGTGTCCCAT  800

seq1  GTGATAAAGTATGGGATACATTTTGACTTCATTTTTGGGTGAAATATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAAGTATGGGATACATTTTGACTTCATTTTTGGGTGAAATATATT  850

seq1  ACCCTTAAATTGCTGACAGAGACTCTTCAAGAGCAATTACTGTTAAGGCT  900
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  ACCCTTAAATTGCTGACAGAGACTCTTC-AGAGCAATTACTGTTAA-GCT  898

seq1  GTTGGGAAATGGGGAAGGCCAGAAAAAGTGTGTGCCCTCAGGGGTGTATG  950
      |||||||||||||| | ||||| ||||||||||||||||| |||||||||
seq2  GTTGGGAAATGGGG-ACGCCAG-AAAAGTGTGTGCCCTCA-GGGTGTATG  945

seq1  CACACAGGTATACAGGTTTCTGTATGTGCCCTCAGAAGGTGTGTGCACAC  1000
      |||||| ||||||| ||||||||||||| |||||||  ||||||||||||
seq2  CACACA-GTATACA-GTTTCTGTATGTG-CCTCAGA--GTGTGTGCACAC  990

seq1  AGGTATACAGGGTACTGTGTGTGTCCTCAGAAGGTGTGTGCACACAGGTA  1050
      | ||||||| |||||||||||||| ||||||| ||||||||||||| |||
seq2  A-GTATACA-GGTACTGTGTGTGT-CTCAGAA-GTGTGTGCACACA-GTA  1035

seq1  TGCAGGTTACTGTGTGTGTCCTCAGAAGATGTGTGCACACAGGTATGCAG  1100
      |||||  ||||| |||||| |||   ||||||||||||||| ||||||| 
seq2  TGCAG--TACTGGGTGTGT-CTC--GAGATGTGTGCACACA-GTATGCA-  1078

seq1  GGTACTGTGTGT  1112
      ||||||| ||||
seq2  GGTACTGGGTGT  1090