BAC Information

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BAC

Clone NameB6Ng01-073J10
Chromosome8 (Build37)
Map Location 17,736,406 - 17,879,229
singlet/doubletdoublet
Overlap genenone
Upstream geneCsmd1
Downstream geneLOC665638, LOC100040466, Mcph1, Angpt2, Agpat5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073J10.bB6Ng01-073J10.g
ACCDH890668DH890669
length9281,031
definitionDH890668|Mus musculus domesticus DNA, BAC clone: B6Ng01-073J10, 5' end.DH890669|Mus musculus domesticus DNA, BAC clone: B6Ng01-073J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,878,306 - 17,879,229)(17,736,406 - 17,737,434)
sequence
gaattcaatgctttctttcaaacttcttgggcaccaggtatgcaaacaaa
acactcatataaataaaattaaatcattttttttacaaaaagctacatgg
tatagatcagttaaacatatgaagtcttgatatgtttatatgatatgaag
aaaaagggattttgtgggagggagtggaaataagagcacagaatatgcag
tgggtttttgattaaagaatattacatttataaggagttgaaaaagaata
aacaagatttgtcacttattcaactctttcaatgtatgtacaactactac
aagtatataattccaaaagtgaattagcttcatagtagggaatcaaattg
agaaactaataaaaggattcccatgtcaagccaaggtcatattctatttt
ctttatatgcacagtggctattactttgctagatagaattaaaagtatgt
cttgagaaataaatacagggtggcattagtcccattactcattgctaact
tttaccatcttagacaacactgggtattttatcatgaagatgtagctcat
ggtacagctgatggttcgtgatagcaatggcacttagaacaaaggatgct
ctatcctttttgggggggttggctggatatagtctggcaattagacagtt
tgttgcttgttctatatgattttgatatcagtggagacactgcaaaatga
aaattctgcagtctgatcttcacactggtggtgatttaatccatcatgga
catgtgagaagatcccaaatagaaactttagataatgaggcccacttgaa
ctcccatattggttattttttatatatataccttacaatgtctctatatc
tggaagataaaatcttccagagtcagagaccctctatgtttgagagcccc
taaaagggcttgctcctaaaaatcttca
gaattcaccttcaggaaggactcagatccacagtagttggacttatggcc
actgacaatgagaagaggcttagcacagtgagtatttcaaattgtaaagt
cataaggtgaaatgatatgaaataactgataatttttatgtgcaagcaaa
tgcattctcggagaacagaaaaaactaaagttgtatctgtcagcacaagt
gatctagaacagattgttggaatttaaagaaattattcactgataaacaa
tatttgtgtttttcataagcacatgatataatgactctaaaatgtgtcac
atgtggcataaagaatagcatttaaaaccatatatcatacgaagaaatag
tgatgtttaatccatactcagttaccccaagatggtccagagattacaat
gggcaatgtcggatttagcatcttaccaatactgcagtcataaaatcatg
ggaaaatatacttataatgaatacaagaatatttttttcaggtatgaata
gaagtttaagaaaataaaaaaaaaatgaatctagaattagaagatgatat
agggttaagagtactgactgttattccagagaacctaggattttgttcct
agcacccacatggcagaatatggccatctgtaacttcagttcctgggaat
tcagttagctattctggcctttgtaggcaatgaaagtgtgaggtaaacgt
acatacatgcagatgacatgcccagacaaactttcaaaatattaatattt
taaagttaaaatctaaataacatttgagttcttttgtgattgggttacct
cactcaggataatgccctccaggtccaaccatttgcctaggaatttcata
aattcattctttttaatagctgagtagtactccattggtgtaatgtacaa
cattttttgtatccattcctctgttgagggacatctggggttcttttcca
gcttctggcgatataataaagctgctatgaacatagtgaagcatgtttct
ttttacttagtttggaacatctttctggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_17878306_17879229
seq2: B6Ng01-073J10.b_44_971 (reverse)

seq1  TGATGATTTTTA-GAGCAGCCCCTTCTAGGGGCTCTCAAACATAGAGGGT  49
      ||| |||||||| |||||  ||||| ||||||||||||||||||||||||
seq2  TGAAGATTTTTAGGAGCAAGCCCTTTTAGGGGCTCTCAAACATAGAGGGT  50

seq1  CTCTGACTCTGGAAGATTTTATCTTCCAGATATAGAGACATTGTAAGGTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTCTGGAAGATTTTATCTTCCAGATATAGAGACATTGTAAGGTA  100

seq1  TATATATAAAAAATAACCAATATGGGAGTTCAAGTGGGCCTCATTATCTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAAAAAATAACCAATATGGGAGTTCAAGTGGGCCTCATTATCTA  150

seq1  AAGTTTCTA-TTGGGATCTTCTCACATGTCCATGATGGATTAAATCACCA  198
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTATTTGGGATCTTCTCACATGTCCATGATGGATTAAATCACCA  200

seq1  CCAGTGTGAAGATCAGACTGCAGAATTTTCATTTTGCAGTGTCTCCACTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTGAAGATCAGACTGCAGAATTTTCATTTTGCAGTGTCTCCACTG  250

seq1  ATATC-AAATCATATAGAACAAGCAAC-AACTGTCTAATTGCCAGACTAT  296
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATATCAAAATCATATAGAACAAGCAACAAACTGTCTAATTGCCAGACTAT  300

seq1  ATCCAGCCAACCCCCCCAAAAAGGATAGAGCATCCTTTGTTCTAAGTGCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCCAACCCCCCCAAAAAGGATAGAGCATCCTTTGTTCTAAGTGCC  350

seq1  ATTGCTATCACGAACCATCAGCTGTACCATGAGCTACATCTTCATGATAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTATCACGAACCATCAGCTGTACCATGAGCTACATCTTCATGATAA  400

seq1  AATACCCAGTGTTGTCTAAGATGGTAAAAGTTAGCAATGAGTAATGGGAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCCAGTGTTGTCTAAGATGGTAAAAGTTAGCAATGAGTAATGGGAC  450

seq1  TAATGCCACCCTGTATTTATTTCTCAAGACATACTTTTAATTCTATCTAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCACCCTGTATTTATTTCTCAAGACATACTTTTAATTCTATCTAG  500

seq1  CAAAGTAATAGCCACTGTGCATATAAAGAAAATAGAATATGACCTTGGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAATAGCCACTGTGCATATAAAGAAAATAGAATATGACCTTGGCT  550

seq1  TGACATGGGAATCCTTTTATTAGTTTCTCAATTTGATTCCCTACTATGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGGGAATCCTTTTATTAGTTTCTCAATTTGATTCCCTACTATGAA  600

seq1  GCTAATTCACTTTTGGAATTATATACTTGTAGTAGTTGTACATACATTGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTCACTTTTGGAATTATATACTTGTAGTAGTTGTACATACATTGA  650

seq1  AAGAGTTGAATAAGTGACAAATCTTGTTTATTCTTTTTCAACTCCTTATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTGAATAAGTGACAAATCTTGTTTATTCTTTTTCAACTCCTTATA  700

seq1  AATGTAATATTCTTTAATCAAAAACCCACTGCATATTCTGTGCTCTTATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATATTCTTTAATCAAAAACCCACTGCATATTCTGTGCTCTTATT  750

seq1  TCCACTCCCTCCCACAAAATCCCTTTTTCTTCATATCATATAAACATATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCCCTCCCACAAAATCCCTTTTTCTTCATATCATATAAACATATC  800

seq1  AAGACTTCATATGTTTAACTGATCTATACCATGTAGCTTTTTGTAAAAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTCATATGTTTAACTGATCTATACCATGTAGCTTTTTGTAAAAAA  850

seq1  AATGATTTAATTTTATTTATATGAGTGTTTTGTTTGCATACCTGGTGCCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTAATTTTATTTATATGAGTGTTTTGTTTGCATACCTGGTGCCC  900

seq1  AAGAAGTTTGAAAGAAAGCATTGAATTC  924
      ||||||||||||||||||||||||||||
seq2  AAGAAGTTTGAAAGAAAGCATTGAATTC  928

seq1: chr8_17736406_17737434
seq2: B6Ng01-073J10.g_67_1097

seq1  GAATTCACCTTCAGGAAGGACTCAGATCCACAGTAGTTGGACTTATGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTCAGGAAGGACTCAGATCCACAGTAGTTGGACTTATGGCC  50

seq1  ACTGACAATGAGAAGAGGCTTAGCACAGTGAGTATTTCAAATTGTAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAATGAGAAGAGGCTTAGCACAGTGAGTATTTCAAATTGTAAAGT  100

seq1  CATAAGGTGAAATGATATGAAATAACTGATAATTTTTATGTGCAAGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGTGAAATGATATGAAATAACTGATAATTTTTATGTGCAAGCAAA  150

seq1  TGCATTCTCGGAGAACAGAAAAAACTAAAGTTGTATCTGTCAGCACAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTCGGAGAACAGAAAAAACTAAAGTTGTATCTGTCAGCACAAGT  200

seq1  GATCTAGAACAGATTGTTGGAATTTAAAGAAATTATTCACTGATAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGAACAGATTGTTGGAATTTAAAGAAATTATTCACTGATAAACAA  250

seq1  TATTTGTGTTTTTCATAAGCACATGATATAATGACTCTAAAATGTGTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTGTTTTTCATAAGCACATGATATAATGACTCTAAAATGTGTCAC  300

seq1  ATGTGGCATAAAGAATAGCATTTAAAACCATATATCATACGAAGAAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCATAAAGAATAGCATTTAAAACCATATATCATACGAAGAAATAG  350

seq1  TGATGTTTAATCCATACTCAGTTACCCCAAGATGGTCCAGAGATTACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTTAATCCATACTCAGTTACCCCAAGATGGTCCAGAGATTACAAT  400

seq1  GGGCAATGTCGGATTTAGCATCTTACCAATACTGCAGTCATAAAATCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGTCGGATTTAGCATCTTACCAATACTGCAGTCATAAAATCATG  450

seq1  GGAAAATATACTTATAATGAATACAAGAATATTTTTTTCAGGTATGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATATACTTATAATGAATACAAGAATATTTTTTTCAGGTATGAATA  500

seq1  GAAGTTTAAGAAAATAAAAAAAAAATGAATCTAGAATTAGAAGATGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTAAGAAAATAAAAAAAAAATGAATCTAGAATTAGAAGATGATAT  550

seq1  AGGGTTAAGAGTACTGACTGTTATTCCAGAGAACCTAGGATTTTGTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAAGAGTACTGACTGTTATTCCAGAGAACCTAGGATTTTGTTCCT  600

seq1  AGCACCCACATGGCAGAATATGGCCATCTGTAACTTCAGTTCCTGGGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCACATGGCAGAATATGGCCATCTGTAACTTCAGTTCCTGGGAAT  650

seq1  TCAGTTAGCTATTCTGGCCTTTGTAGGCAATGAAAGTGTGAGGTAAACGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAGCTATTCTGGCCTTTGTAGGCAATGAAAGTGTGAGGTAAACGT  700

seq1  ACATACATGCAGATGACATGCCCAGACAAACTTTCAAAATATTAATATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATGCAGATGACATGCCCAGACAAACTTTCAAAATATTAATATTT  750

seq1  TAAAGTTAAAATCTAAATAACATTTGAGTTCTTTTGTGATTGGGTTACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTAAAATCTAAATAACATTTGAGTTCTTTTGTGATTGGGTTACCT  800

seq1  CACTCAGGATAATGCCCTCCAGGTCCAACCATTTGCCTAGGAATTTCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGATAATGCCCTCCAGGTCCAACCATTTGCCTAGGAATTTCATA  850

seq1  AATTCATTCTTTTTAATAGCTGAGTAGTACTCCATT-GTGTAAATGTACC  899
      |||||||||||||||||||||||||||||||||||| |||| ||||||| 
seq2  AATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGGTGT-AATGTACA  899

seq1  ACATTTTTTGTATCCATTCCTCTGTTGAGGGACATCT-GGGTTC-TTTCC  947
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  ACATTTTTTGTATCCATTCCTCTGTTGAGGGACATCTGGGGTTCTTTTCC  949

seq1  AGCTTCTGGCGATTATAAATAAAGCTGCTATGAACATAGTGGAGCATGTT  997
      |||||||||||| ||| |||||||||||||||||||||||| ||||||||
seq2  AGCTTCTGGCGA-TAT-AATAAAGCTGCTATGAACATAGTGAAGCATGTT  997

seq1  TCTTTTTTACTAG-TTGGAACATC-TTCTGGATA  1029
      |||||||   ||| |||||||||| |||||||||
seq2  TCTTTTTACTTAGTTTGGAACATCTTTCTGGATA  1031