BAC Information

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BAC

Clone NameB6Ng01-074B12
Chromosome8 (Build37)
Map Location 94,812,212 - 94,812,825
singlet/doubletsinglet
Overlap genenone
Upstream geneRpgrip1l, AJ237917, LOC100041254, LOC674324, LOC100040628, Irx3
Downstream gene4933436C20Rik, Irx5, Irx6, LOC100041325, Mmp2, Aytl1, Capns2, LOC100040752, Slc6a2, EG244595, LOC382044, Es1, LOC676523, Ces3, Es22, AU018778
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074B12.g
ACCDH891037
length614
definitionDH891037|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctctgtgtgtatacactgcatcttccttatgcatccatgtgtca
agaggcatctatactggttccattttctagctattgagaagaggatccac
tggaggaaggcaaggagccatcaaaagtgagggagccctggggcaagaag
tagggggatggaaccaataaaagcaaagtattctgaaaatcccacaagga
attccattactttatatgctaatttaaaaaacaataaaacacttccccca
ccccctgccatcgctctcccttcctttctcttcctctctttctgtctgtc
tcacagggtctcactatacagcctaggttggatttgaacttgtgatcctc
ttgcctcctgaaagttggtaaaggagacatgtgctttggtgcccaagtat
ctaaaaatagcatctgggctggctagatggtcccctgggtaaggatgctg
gccagcacaagcctgacaacctggttttcatcccaagagcccacaagttg
gacagagggagcacacatttctgcaagctgtcccctgaacgcgccagtaa
ctaataggttcttaggagcgactgctggggtgggtgcctccccaagtgga
cgctgaccctgtga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_94812212_94812825
seq2: B6Ng01-074B12.g_70_683 (reverse)

seq1  TCACAGGGTCAGCGTCCACCTGGGGAGGCACCCACCCCAGCAGTCGCTCC  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCACAGGGTCAGCGTCCACTTGGGGAGGCACCCACCCCAGCAGTCGCTCC  50

seq1  TAAGAACCTATTAGTTACTGGGGCGTGCAGGGGACAGCTTGCAGAAATGT  100
      ||||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  TAAGAACCTATTAGTTACTGGCGCGTTCAGGGGACAGCTTGCAGAAATGT  100

seq1  GTGCTCCCTCTGTCCAACATGTGGGCTCTTGGGATGAAAACCAGGTTGTC  150
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTGCTCCCTCTGTCCAACTTGTGGGCTCTTGGGATGAAAACCAGGTTGTC  150

seq1  AGGCTTGTGCTGGCCAGCATCCTTACCCAGGGGACCATCTAGCCAGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGTGCTGGCCAGCATCCTTACCCAGGGGACCATCTAGCCAGCCCA  200

seq1  GATGCTATTTTTAGATACTTGGGCACCAAAGCACATGTCTGCTCTACCAA  250
      |||||||||||||||||||||||||||||||||||||||| || ||||||
seq2  GATGCTATTTTTAGATACTTGGGCACCAAAGCACATGTCTCCTTTACCAA  250

seq1  CTCTCAGGAGGCAAGAGGATCACAAGTTCAAATCCAACCTAGGCTGTATA  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGAGGCAAGAGGATCACAAGTTCAAATCCAACCTAGGCTGTATA  300

seq1  GTGAGACCCTGTGAGACAGACAGAAAGAGAGGAAGAGAAAGGAAGGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACCCTGTGAGACAGACAGAAAGAGAGGAAGAGAAAGGAAGGGAGA  350

seq1  GCGATGGCAGGGGGTGGGGGAAGTGTTTTATTGTTTTTTAAATTAGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATGGCAGGGGGTGGGGGAAGTGTTTTATTGTTTTTTAAATTAGCATA  400

seq1  TAAAGTAATGGAATTCCTTGTGGGATTTTCAGAATACTTTGCTTTTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAATGGAATTCCTTGTGGGATTTTCAGAATACTTTGCTTTTATTG  450

seq1  GTTCCATCCCCCTACTTCTTGGCCCAGGGCTCCCTCACTTCTGATGGCTC  500
      ||||||||||||||||||||| |||||||||||||||||| |||||||||
seq2  GTTCCATCCCCCTACTTCTTGCCCCAGGGCTCCCTCACTTTTGATGGCTC  500

seq1  CCTGCCTTCCTCCAGTGGATCCTCTTCCCAATAGCTAGAAAATGGAACCA  550
      | ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTGCCTTCCTCCAGTGGATCCTCTTCTCAATAGCTAGAAAATGGAACCA  550

seq1  GTCTAGATGCCTCTCGACACATGGATGCATAAGGAAGATGCAGTGTATAC  600
      || ||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTATAGATGCCTCTTGACACATGGATGCATAAGGAAGATGCAGTGTATAC  600

seq1  ACACAGTGGAATTC  614
      |||||| |||||||
seq2  ACACAGAGGAATTC  614