BAC Information

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BAC

Clone NameB6Ng01-074B24
Chromosome8 (Build37)
Map Location 68,218,503 - 68,308,849
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneKlhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967
Downstream geneLOC100040986, 1810029B16Rik, Tktl2, Npy5r, Npy1r
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074B24.bB6Ng01-074B24.g
ACCDH891060DH891061
length1,131246
definitionDH891060|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B24, 5' end.DH891061|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,218,503 - 68,219,638)(68,308,605 - 68,308,849)
sequence
gaattcaattaaaataaatgattactataatttattgcattaaaaatggc
tgtccatatatcttttcccacccatcagacaattttgctgctaaaacagc
cattttacatatgggtagcttaaggagatctttttgcatttatgacacta
gaaatatcatgccattaacagctttaattacttaaaaatgaaaaatctgt
aatatgctcttttcaaaaacgcctccctcttctattattcaatacagttt
tatgcaaacgatcaagaatgttatcaagaattttatctcacaacttctgg
tttatgcaacaggaatggaaaagctaagcagtcattttcagctgtcagga
atcgaaacatggtaatctgatgttctgttttgatatcagcaaatcgaagc
tttctaatgcttaatcacatcctctaggctactaagtgttatttaaattt
caatctcaaagcaaagattatatgcaattacaatagttcacatcattata
gttcgctacactctacttaaataccagggatgattaacatatgcaaatat
tttaagtaatatatttgtgaatagaggtctttggatcatctttgtccttg
tgcaaaaaaatatctgtgtctatgcacatggtgcacagacaaatatgcaa
gcaaaaaaagtaaaaattaataaatatgcttacaagtgcctatttcaaaa
agttaaatacaatttagggatttttatctcattctagttccttcatggat
tgtttgattgcagtttgatacatttaacataaaataagttatagataata
aattattacttgtttacttaaataacaagaatacttctgaaattattatt
tttaagttttttattagatattttcttcatttacatttcaaatgttatcc
caaaagtcccctataccctccccctgccctgctcccctaccactcactcc
acttcttgggccctggtgttctcctgtactggggcatataaagtgtgcta
gactaaagggctctcttcccaatgatgacgactaggccatcttctgctac
atatgcagctaagaaacacgagttttgagtactgatagtcataataatgt
tacacctattacggtgcaataccccttcagc
atgtaattacattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtttatgacatgaaagtgaaaggaaaatgtttaggggga
caaaagaaacacagaaggttaaaaacaggtggagatatgtgagaaggaat
gtcatcagcagatagatagatagatagatagatagatagatagatagata
gatagatagatagatagatagatagagatagacaggtaggtagatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68218503_68219638
seq2: B6Ng01-074B24.b_41_1171

seq1  GAATTCAATTAAAATAAATGATTACTATAATTTATTGCATTAAAAATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTAAAATAAATGATTACTATAATTTATTGCATTAAAAATGGC  50

seq1  TGTCCATATATCTTTTCCCACCCATCAGACAATTTTGCTGCTAAAACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATATATCTTTTCCCACCCATCAGACAATTTTGCTGCTAAAACAGC  100

seq1  CATTTTACATATGGGTAGCTTAAGGAGATCTTTTTGCATTTATGACACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTACATATGGGTAGCTTAAGGAGATCTTTTTGCATTTATGACACTA  150

seq1  GAAATATCATGCCATTAACAGCTTTAATTACTTAAAAATGAAAAATCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATCATGCCATTAACAGCTTTAATTACTTAAAAATGAAAAATCTGT  200

seq1  AATATGCTCTTTTCAAAAACGCCTCCCTCTTCTATTATTCAATACAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCTCTTTTCAAAAACGCCTCCCTCTTCTATTATTCAATACAGTTT  250

seq1  TATGCAAACGATCAAGAATGTTATCAAGAATTTTATCTCACAACTTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAACGATCAAGAATGTTATCAAGAATTTTATCTCACAACTTCTGG  300

seq1  TTTATGCAACAGGAATGGAAAAGCTAAGCAGTCATTTTCAGCTGTCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCAACAGGAATGGAAAAGCTAAGCAGTCATTTTCAGCTGTCAGGA  350

seq1  ATCGAAACATGGTAATCTGATGTTCTGTTTTGATATCAGCAAATCGAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAAACATGGTAATCTGATGTTCTGTTTTGATATCAGCAAATCGAAGC  400

seq1  TTTCTAATGCTTAATCACATCCTCTAGGCTACTAAGTGTTATTTAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAATGCTTAATCACATCCTCTAGGCTACTAAGTGTTATTTAAATTT  450

seq1  CAATCTCAAAGCAAAGATTATATGCAATTACAATAGTTCACATCATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCAAAGCAAAGATTATATGCAATTACAATAGTTCACATCATTATA  500

seq1  GTTCGCTACACTCTACTTAAATACCAGGGATGATTAACATATGCAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGCTACACTCTACTTAAATACCAGGGATGATTAACATATGCAAATAT  550

seq1  TTTAAGTAATATATTTGTGAATAGAGGTCTTTGGATCATCTTTGTCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTAATATATTTGTGAATAGAGGTCTTTGGATCATCTTTGTCCTTG  600

seq1  TGCAAAAAAATATCTGTGTCTATGCACATGGTGCACAGACAAATATGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAAATATCTGTGTCTATGCACATGGTGCACAGACAAATATGCAA  650

seq1  GCAAAAAAAGTAAAAATTAATAAATATGCTTACAAGTGCCTATTTCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAAAGTAAAAATTAATAAATATGCTTACAAGTGCCTATTTCAAAA  700

seq1  AGTTAAATACAATTTAGGGATTTTTATCTCATTCTAGTTCCTTCATGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATACAATTTAGGGATTTTTATCTCATTCTAGTTCCTTCATGGAT  750

seq1  TGTTTGATTGCAGTTTGATACATTTAACATAAAATAAGTTATAGATAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATTGCAGTTTGATACATTTAACATAAAATAAGTTATAGATAATA  800

seq1  AATTATTACTTGTTTACTTAAATAACAAGAATACTTCTGAAATTATTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTACTTGTTTACTTAAATAACAAGAATACTTCTGAAATTATTATT  850

seq1  TTTAAGTTTTTTATTAGATATTTTCTTCATTTACATTTCAAATGTTATCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTTTTTATTAGATATTTTCTTCATTTACATTTCAAATGTTATCC  900

seq1  CAAAAGTCCCCTATACCCTCCCCCTGCCCTGCTCCCCTACCCACTCACTC  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  CAAAAGTCCCCTATACCCTCCCCCTGCCCTGCTCCCCTA-CCACTCACT-  948

seq1  CCACTTCTT-GGCCCTGGTGTTCTCCTGTACTGGGGCATATAAAGTGTGC  999
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCTTGGGCCCTGGTGTTCTCCTGTACTGGGGCATATAAAGTGTGC  998

seq1  TAGACTAAGGGGCCTCTCTTCCCAATGATGGCCGACTAGGCCATCTTCTG  1049
      |||||||| ||| |||||||||||||||| | ||||||||||||||||||
seq2  TAGACTAAAGGG-CTCTCTTCCCAATGAT-GACGACTAGGCCATCTTCTG  1046

seq1  CTACATATGCAGCT-AGAAACACGAGTTCTGGAGGTACTGATTAGTTCAT  1098
      |||||||||||||| ||||||||||||| ||   ||||||| ||| ||||
seq2  CTACATATGCAGCTAAGAAACACGAGTTTTG--AGTACTGA-TAG-TCAT  1092

seq1  ATTATTGTTACACCTA-TACGGTTGCATACCCCTTCAGC  1136
      | || ||||||||||| ||||||   |||||||||||||
seq2  AATAATGTTACACCTATTACGGTGCAATACCCCTTCAGC  1131

seq1: chr8_68308605_68308849
seq2: B6Ng01-074B24.g_70_314 (reverse)

seq1  ATCTACCTACCTGTCTATCTCTATCTATCTATCTATCTATCTATCTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACCTACCTGTCTATCTCTATCTATCTATCTATCTATCTATCTATCT  50

seq1  ATCTATCTATCTATCTATCTATCTATCTATCTATCTGCTGATGACATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATCTATCTATCTATCTGCTGATGACATTCC  100

seq1  TTCTCACATATCTCCACCTGTTTTTAACCTTCTGTGTTTCTTTTGTCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACATATCTCCACCTGTTTTTAACCTTCTGTGTTTCTTTTGTCCCC  150

seq1  CTAAACATTTTCCTTTCACTTTCATGTCATAAACACACACACACACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACATTTTCCTTTCACTTTCATGTCATAAACACACACACACACACAC  200

seq1  ACACACACACACACACACACACACACACACACAATGTAATTACAT  245
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACAATGTAATTACAT  245