BAC Information

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BAC

Clone NameB6Ng01-074G22
Chromosome8 (Build37)
Map Location 120,166,374 - 120,289,963
singlet/doubletdoublet
Overlap gene4632417N05Rik, Hsd17b2
Upstream geneCdyl2, LOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik, Plcg2
Downstream geneMphosph6, Cdh13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074G22.bB6Ng01-074G22.g
ACCDH891283DH891284
length1,1101,041
definitionDH891283|Mus musculus domesticus DNA, BAC clone: B6Ng01-074G22, 5' end.DH891284|Mus musculus domesticus DNA, BAC clone: B6Ng01-074G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,166,374 - 120,167,458)(120,288,937 - 120,289,963)
sequence
gaattcctaaggtattaagagcaccattaaaagatcagatgtttgcgtga
ttggcaaaccctgagagtaaatgtattgactagaagatacacatgtatga
agtcatcacttaattaaaaaccccactcatgggctggcaagatggctcag
tggttaagagcactgactgctcttccgaaggtcctaagttcaaatcccag
caacgacatggtggctcacaaccatctgtaatcaaatcttacaccctctt
ctggtgtgtctaaagacagctacagtgtacttatatataataataaataa
aatctttttttaaaaaaacccagtcattcaaataataatagaaaacctgt
tcgctctcgggaaagacacgagcaccacattggctggttttatgtgtcaa
cttgatacaagttagagtcatcaaagaggaagggatttcagctgaggaaa
tgtctccatgagatccagctgtaaggcattttcttaactagtgatcactg
ggggagggctggcccatggtaggtggcgccatccctgggttttataagga
agggggctgagcaggccatgtgaagcaagccagcaagcagagcccctcca
tggcttctgcatcagctcctgcctccaggtttcctgatctgagtccatcc
cctgaattcctttagtgatgaacagcaaacgtggaagtgtaagctgaata
aaccctttccttccccaaacttgctttctttggtcatggtatttttgttg
cagcaataaaaaaccctatagacgaaaagcaccctaacagggtggacacc
ccgacagagctggacttgaaaacatgggctcagttggcccagattgtagc
ccgaaagtttcagggcagaatgttagatcccaccgggagttaacgtggca
agtcacttttagggcactcctgtttgactgccagcaggcttctcagcagg
gacacttataggctagaaatagaggatgctgttttttattggtgaaataa
aggttaaatggaaactatttgccaatcaatggttgacttagcagaaagtc
tattctttagaacagaagaaagttctattcttaaagtcggttcaagttag
agggaaacta
gaattcctagcatggggatgagggtgctgctcagcggcaggatgcttgtc
tagccagggatgagggtgctgctcagtggcaggatgcttgtctagcacat
gctagcttaatccttagaactacaaaataaacagaggggggcaggaagga
gagaccaagtgggagatctctgagaggctaaatcttttaagtttagactc
cattttagagaacctgacctaagtttgaactcaggtaaacgagcgggctg
gtatggagcattagtttccaagttgcccccaataaaacctgagcctagct
ccagtctctaagacattagtttagcgtttccaggttacaccctcaacaag
accagcgtctccaggttattcccccaacaaacctgcaccccaggttataa
gcccaccccctacctaacgaacaccaatgcagagggaaacaaaagttagg
tttatgctaggattcccagcaccagccaatcatgttaaaggccacaggag
ctttccaattagacgcttgcacacttacccctgctggctgcttactatat
tcggggcttcccccaccaccaaaaccatcctgcatgatggggttgcattg
ggaagggagcgagctagcaggaacagaataaagaccctgctataagttgc
atcagatcagctcctgtctgttttttttgggggaatcactgcacttcgtt
ggcactgtaatttcagtacctaagtcagaagtcgttgtttgccttttaaa
gcaaaaaccctcagaggctaaggagggaggacccctgttgagtttcagtc
tccaaacaaaagacagaagaggtttagacaggaggaagacttgtcaactt
tcttgattgtccatatagggaaaaaaaacaaaaaacaaaacaaggtgatg
ggggactttttgtcagggatcatggggtatggggtttcacgtgtatttat
gaacaaagtcctcattgcactgtgggggggaagatttacccaatggacaa
cagatgagagtaataaccagtcgtggcttaattggtagcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_120166374_120167458
seq2: B6Ng01-074G22.b_42_1151

seq1  GAATTCCTAAGGTATTAAGAGCACCATTAAAAGATCAGATGTTTGCGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGGTATTAAGAGCACCATTAAAAGATCAGATGTTTGCGTGA  50

seq1  TTGGCAAACCCTGAGAGTAAATGTATTGACTAGAAGATACACATGTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAAACCCTGAGAGTAAATGTATTGACTAGAAGATACACATGTATGA  100

seq1  AGTCATCACTTAATTAAAAACCCCACTCATGGGCTGGCAAGATGGCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCACTTAATTAAAAACCCCACTCATGGGCTGGCAAGATGGCTCAG  150

seq1  TGGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTAAGTTCAAATCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAGAGCACTGACTGCTCTTCCGAAGGTCCTAAGTTCAAATCCCAG  200

seq1  CAACGACATGGTGGCTCACAACCATCTGTAATCAAATCTTACACCCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGACATGGTGGCTCACAACCATCTGTAATCAAATCTTACACCCTCTT  250

seq1  CTGGTGTGTCTAAAGACAGCTACAGTGTACTTATATATAATAATAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGTCTAAAGACAGCTACAGTGTACTTATATATAATAATAAATAA  300

seq1  AATCTTTTTTTAAAAAAACCCAGTCATTCAAATAATAATAGAAAACCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTTTAAAAAAACCCAGTCATTCAAATAATAATAGAAAACCTGT  350

seq1  TCGCTCTCGGGAAAGACACGAGCACCACATTGGCTGGTTTTATGTGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTCTCGGGAAAGACACGAGCACCACATTGGCTGGTTTTATGTGTCAA  400

seq1  CTTGATACAAGTTAGAGTCATCAAAGAGGAAGGGATTTCAGCTGAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATACAAGTTAGAGTCATCAAAGAGGAAGGGATTTCAGCTGAGGAAA  450

seq1  TGTCTCCATGAGATCCAGCTGTAAGGCATTTTCTTAACTAGTGATCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCATGAGATCCAGCTGTAAGGCATTTTCTTAACTAGTGATCACTG  500

seq1  GGGGAGGGCTGGCCCATGGTAGGTGGCGCCATCCCTGGGTTTTATAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGCTGGCCCATGGTAGGTGGCGCCATCCCTGGGTTTTATAAGGA  550

seq1  AGGGGGCTGAGCAGGCCATGTGAAGCAAGCCAGCAAGCAGAGCCCCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCTGAGCAGGCCATGTGAAGCAAGCCAGCAAGCAGAGCCCCTCCA  600

seq1  TGGCTTCTGCATCAGCTCCTGCCTCCAGG-TTCCTGATCTGAGTCCATCC  649
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGGCTTCTGCATCAGCTCCTGCCTCCAGGTTTCCTGATCTGAGTCCATCC  650

seq1  CCTGAATTCCTTTAGTGATGAACAGC-AACGTGGAAGTGTAAGCTGAATA  698
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTGAATTCCTTTAGTGATGAACAGCAAACGTGGAAGTGTAAGCTGAATA  700

seq1  AACCCTTTCCTTCCCCAAACTTGCTT--CTTGGTCATGGTA-TTTTGTTG  745
      ||||||||||||||||||||||||||   |||||||||||| ||||||||
seq2  AACCCTTTCCTTCCCCAAACTTGCTTTCTTTGGTCATGGTATTTTTGTTG  750

seq1  CAGCAAT-AAAAACCCTA-AGACG-AAAGCACC--TACA-GGTGGACA-C  788
      ||||||| |||||||||| ||||| ||||||||   ||| |||||||| |
seq2  CAGCAATAAAAAACCCTATAGACGAAAAGCACCCTAACAGGGTGGACACC  800

seq1  CCGACAGAGCT-GAC-TGAAAACAT-GGCTCAGT--GGCCAGATTGTAG-  832
      ||||||||||| ||| ||||||||| ||||||||  | ||||||||||| 
seq2  CCGACAGAGCTGGACTTGAAAACATGGGCTCAGTTGGCCCAGATTGTAGC  850

seq1  CCGAAAG-TTCAGGGCAGAATGTTAGATCCCACC-GGAG-TAACGTGGCA  879
      ||||||| |||||||||||||||||||||||||| |||| ||||||||||
seq2  CCGAAAGTTTCAGGGCAGAATGTTAGATCCCACCGGGAGTTAACGTGGCA  900

seq1  AGTCACTTTAAGGGCACTCCTGTTTGACTGCCAGCAGGCTTCTCAGCAGG  929
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTTTAGGGCACTCCTGTTTGACTGCCAGCAGGCTTCTCAGCAGG  950

seq1  GACAC-TATAGGCTAGGAAATAGAGGATGCTGTTTTTTATT-GTGAAAAT  977
      ||||| ||||||||| ||||||||||||||||||||||||| ||||||  
seq2  GACACTTATAGGCTA-GAAATAGAGGATGCTGTTTTTTATTGGTGAAATA  999

seq1  AAAGTTAAATGAAAACTAATTGCCAATCAA-GGTTGACATAGCCAGAAAG  1026
      || |||||||| |||||| ||||||||||| ||||||| ||| |||||||
seq2  AAGGTTAAATGGAAACTATTTGCCAATCAATGGTTGACTTAG-CAGAAAG  1048

seq1  TCTA-TCTTAAGAACAGAAGAAAG-TCTATTC-TAAAGTCGGTTCAAGGT  1073
      |||| |||| |||||||||||||| ||||||| ||||||||||||||| |
seq2  TCTATTCTTTAGAACAGAAGAAAGTTCTATTCTTAAAGTCGGTTCAAGTT  1098

seq1  AGAGGGACACTA  1085
      ||||||| ||||
seq2  AGAGGGAAACTA  1110

seq1: chr8_120288937_120289963
seq2: B6Ng01-074G22.g_70_1110 (reverse)

seq1  TTGCTACCAATT-AGCCACGACTGGCTATTACTTCTCATCTGCTGCTCAT  49
      |||||||||||| |||||||||||| |||||| ||||||||| ||  |||
seq2  TTGCTACCAATTAAGCCACGACTGGTTATTAC-TCTCATCTGTTGTCCAT  49

seq1  TGGCTAATACTT-CCCCCCACAGTGCACTGAGGACTTTG-TCATAAATAC  97
      ||| |||  ||| |||||||||||||| ||||||||||| ||||||||||
seq2  TGGGTAAATCTTCCCCCCCACAGTGCAATGAGGACTTTGTTCATAAATAC  99

seq1  ACGGTGAAA-CCCATA-CCCATGATCCCTGAC-AAAAGT-CCCCATCACC  143
      || |||||| |||||| ||||||||||||||| |||||| ||||||||||
seq2  AC-GTGAAACCCCATACCCCATGATCCCTGACAAAAAGTCCCCCATCACC  148

seq1  TTGTTTTG-TTTTTGTTTTTTT--CCTATATGGACAATCAAGAAAGTTGA  190
      |||||||| |||||||||||||  ||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTTTGTTTTTTTTCCCTATATGGACAATCAAGAAAGTTGA  198

seq1  CAAGTC-TCCTCCTGTCTAAACCTCTTCTGTCTTTTGTTTGGAGACTG-A  238
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  CAAGTCTTCCTCCTGTCTAAACCTCTTCTGTCTTTTGTTTGGAGACTGAA  248

seq1  ACTC-ACAGGGGTCCTCCCTCCTTAGCCTCCTGA-GGTTTTTGCTTT-AA  285
      |||| |||||||||||||||||||||||| |||| |||||||||||| ||
seq2  ACTCAACAGGGGTCCTCCCTCCTTAGCCT-CTGAGGGTTTTTGCTTTAAA  297

seq1  AGGC-AACAACGACTTCTGACTTAGGTACTGAAATTACAGTGCCAACGAA  334
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAACAACGACTTCTGACTTAGGTACTGAAATTACAGTGCCAACGAA  347

seq1  GTGCAGTGATTCCCCC-AAAAAAACAGACAGGAGCTGATCTGATGCAACT  383
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGCAGTGATTCCCCCAAAAAAAACAGACAGGAGCTGATCTGATGCAACT  397

seq1  TATAGCAGGGTCTTTATTCTGTTCCTGCTAGCTCGCTCCCTTCCCAATGC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCAGGGTCTTTATTCTGTTCCTGCTAGCTCGCTCCCTTCCCAATGC  447

seq1  AACCCCATCATGCAGGATGGTTTTGGTGGTGGGGGAAGCCCCGAATATAG  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCATCATGCAGGATGGTTTTGGTGGTGGGGGAAGCCCCGAATATAG  497

seq1  TAAGCAGCCAGCAGGGGTAAGTGTGCAAGCGTCTAATTGGAAAGCTCCTG  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGCCAGCAGGGGTAAGTGTGCAAGCGTCTAATTGGAAAGCTCCTG  547

seq1  TGGCCTTTAACATGATTGGCTGGTGCTGGGAATCCTAGCATAAACCTAAC  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTTAACATGATTGGCTGGTGCTGGGAATCCTAGCATAAACCTAAC  597

seq1  TTTTGTTTCCCTCTGCATTGGTGTTCGTTAGGTAGGGGGTGGGCTTATAA  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTCCCTCTGCATTGGTGTTCGTTAGGTAGGGGGTGGGCTTATAA  647

seq1  CCTGGGGTGCAGGTTTGTTGGGGGAATAACCTGGAGACGCTGGTCTTGTT  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGTGCAGGTTTGTTGGGGGAATAACCTGGAGACGCTGGTCTTGTT  697

seq1  GAGGGTGTAACCTGGAAACGCTAAACTAATGTCTTAGAGACTGGAGCTAG  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGTAACCTGGAAACGCTAAACTAATGTCTTAGAGACTGGAGCTAG  747

seq1  GCTCAGGTTTTATTGGGGGCAACTTGGAAACTAATGCTCCATACCAGCCC  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGTTTTATTGGGGGCAACTTGGAAACTAATGCTCCATACCAGCCC  797

seq1  GCTCGTTTACCTGAGTTCAAACTTAGGTCAGGTTCTCTAAAATGGAGTCT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTTTACCTGAGTTCAAACTTAGGTCAGGTTCTCTAAAATGGAGTCT  847

seq1  AAACTTAAAAGATTTAGCCTCTCAGAGATCTCCCACTTGGTCTCTCCTTC  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAAAAGATTTAGCCTCTCAGAGATCTCCCACTTGGTCTCTCCTTC  897

seq1  CTGCCCCCCTCTGTTTATTTTGTAGTTCTAAGGATTAAGCTAGCATGTGC  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCCTCTGTTTATTTTGTAGTTCTAAGGATTAAGCTAGCATGTGC  947

seq1  TAGACAAGCATCCTGCCACTGAGCAGCACCCTCATCCCTGGCTAGACAAG  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAGCATCCTGCCACTGAGCAGCACCCTCATCCCTGGCTAGACAAG  997

seq1  CATCCTGCCGCTGAGCAGCACCCTCATCCCCATGCTAGGAATTC  1027
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGCCGCTGAGCAGCACCCTCATCCCCATGCTAGGAATTC  1041