BAC Information

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BAC

Clone NameB6Ng01-075L14
Chromosome8 (Build37)
Map Location 59,469,735 - 59,571,835
singlet/doubletdoublet
Overlap genenone
Upstream geneGlra3, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355
Downstream geneLOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075L14.bB6Ng01-075L14.g
ACCDH892202DH892203
length1,16876
definitionDH892202|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L14, 5' end.DH892203|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,570,656 - 59,571,835)(59,469,735 - 59,469,810)
sequence
gaattcagacaaaaaagtacattaaaaaaaaaagcttttagtatataagc
aaggaacactagattgacctgagaaggctgtgtatgtatatacacatgca
cacccacacacccacacatttaacaaaagaaacagagagcatagttttga
gagacagcaacgggacaatatggagagattgaagggaggaaaggaagggg
aaaatgatgtaatgtttaattaaagaaaaggctaaatttaaagtaaatca
gtttgaaaatacaaagttttttcttcttttctggtgtttctttgtagtat
ggtaaacgaggctacttgccgccagcctggattgacttcactccctagct
ggtgtaggagtttcttctgtctcatccttgacatggatctaatgagaaaa
tgatttgcgatggaggaagaatgttcagatgtaaggccttgcttcagcat
ctcacattccagataaatggtaccttagaagatgctcaggaccaagatat
atgtcagctgtgaaaatggagaccattgtgggtttacatttggcttcgtc
tgttgcacacatctaaatacagcattatcagctgccacaaccctccttat
accctgcaggcagaagtaactgtacttaaagtaatgcattaagcatttct
tcgttttccaaggttatctgtcccatctgatactccctcaaaccagaatt
ctagcagttgcatcacctgttgattctagttcctggctcgtaacagtaca
aaaattagtgtttgaccttacttttcaaaagctgaatgtagatttaaata
gttgtcaaagaatttaaagattcaagaacaagagtgagatggttatttgt
gactttcagcttgatgggagttagaaacaaatctctggtcatgtttgtaa
gggattataacgagcaggtcaactctgaatgcctgaaactatggccttct
ttcccacaagagaatgaatcttctcaattggaagccatagtaaaactctg
ccttcctcaagttgctttcttgccagctttttggccacagaataaaagtg
tacacagaattatttctctaccctggagagttggggaaaggaagaagtgt
ttcagcaagatccatgtagatcttgggtagaggaagatgccctattcttt
gatgtagttgatcccagg
tgaggacacgaggccttagtgatttctaaacttccccaaagtaaagaaac
tgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59570656_59571835
seq2: B6Ng01-075L14.b_42_1209 (reverse)

seq1  CCTGTGGATCTAACTACATCTAAGGGATAGGGCATCT--CTCTACCCCAA  48
      |||| ||||| ||||||||| || | |||||||||||  ||||| |||||
seq2  CCTG-GGATC-AACTACATC-AAAGAATAGGGCATCTTCCTCTA-CCCAA  46

seq1  GATCTACCTGGGTCTCTGCTGGAAACACTTCTCTTCCTTTCCCCCAACTC  98
      ||||||| ||| ||| |||| ||||||||  ||||||||| |||||||||
seq2  GATCTACATGGATCT-TGCT-GAAACACT--TCTTCCTTT-CCCCAACTC  91

seq1  TCCAGTGTAGAGAAATACATTCTGTTGGTACACTTTTTATTCCTGTGG-C  147
      ||||| ||||||||||| |||||||  |||||| ||||||| |||||| |
seq2  TCCAGGGTAGAGAAATA-ATTCTGT--GTACAC-TTTTATT-CTGTGGCC  136

seq1  AAATAGCTGGCAAG-AAGCAACTTGAGGAAGGCAGAGTTTTTACTATGGC  196
      ||| |||||||||| |||||||||||||||||||||| ||||||||||||
seq2  AAAAAGCTGGCAAGAAAGCAACTTGAGGAAGGCAGAG-TTTTACTATGGC  185

seq1  TTCCAATTGAAGAAGATTCATTCTCTTGTGGGAAAGAAGG-CATAGTATC  245
      ||||||||| |||||||||||||||||||||||||||||| |||||| ||
seq2  TTCCAATTG-AGAAGATTCATTCTCTTGTGGGAAAGAAGGCCATAGTTTC  234

seq1  AGGCATTCAGAGTTGACCTGCTCGTTATAATCCCTTACAAACATGACCAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTCAGAGTTGACCTGCTCGTTATAATCCCTTACAAACATGACCAG  284

seq1  AGATTTGTTTCTAACTCCCATCAAGCTGAAAGTCACAAATAACCATCTCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGTTTCTAACTCCCATCAAGCTGAAAGTCACAAATAACCATCTCA  334

seq1  CTCTTGTTCTTTGAATCTTTAAATTCTTTGACAACTATTTAAATCTACAT  395
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTC-TTGAATCTTTAAATTCTTTGACAACTATTTAAATCTACAT  383

seq1  TCAGCTTTTGAAAAGTAAGGTCAAACACTAATTTTTGTACTGTTACGAGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTTGAAAAGTAAGGTCAAACACTAATTTTTGTACTGTTACGAGC  433

seq1  CAGGAACTAGAATCAACAGGTGATGCAACTGCTAGAATTCTGGTTTGAGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACTAGAATCAACAGGTGATGCAACTGCTAGAATTCTGGTTTGAGG  483

seq1  GAGTATCAGATGGGACAGATAACCTTGGAAAACGAAGAAATGCTTAATGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATCAGATGGGACAGATAACCTTGGAAAACGAAGAAATGCTTAATGC  533

seq1  ATTACTTTAAGTACAGTTACTTCTGCCTGCAGGGTATAAGGAGGGTTGTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTAAGTACAGTTACTTCTGCCTGCAGGGTATAAGGAGGGTTGTG  583

seq1  GCAGCTGATAATGCTGTATTTAGATGTGTGCAACAGACGAAGCCAAATGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGATAATGCTGTATTTAGATGTGTGCAACAGACGAAGCCAAATGT  633

seq1  AAACCCACAATGGTCTCCATTTTCACAGCTGACATATATCTTGGTCCTGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCACAATGGTCTCCATTTTCACAGCTGACATATATCTTGGTCCTGA  683

seq1  GCATCTTCTAAGGTACCATTTATCTGGAATGTGAGATGCTGAAGCAAGGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTCTAAGGTACCATTTATCTGGAATGTGAGATGCTGAAGCAAGGC  733

seq1  CTTACATCTGAACATTCTTCCTCCATCGCAAATCATTTTCTCATTAGATC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATCTGAACATTCTTCCTCCATCGCAAATCATTTTCTCATTAGATC  783

seq1  CATGTCAAGGATGAGACAGAAGAAACTCCTACACCAGCTAGGGAGTGAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCAAGGATGAGACAGAAGAAACTCCTACACCAGCTAGGGAGTGAAG  833

seq1  TCAATCCAGGCTGGCGGCAAGTAGCCTCGTTTACCATACTACAAAGAAAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCAGGCTGGCGGCAAGTAGCCTCGTTTACCATACTACAAAGAAAC  883

seq1  ACCAGAAAAGAAGAAAAAACTTTGTATTTTCAAACTGATTTACTTTAAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAAAGAAGAAAAAACTTTGTATTTTCAAACTGATTTACTTTAAAT  933

seq1  TTAGCCTTTTCTTTAATTAAACATTACATCATTTTCCCCTTCCTTTCCTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTTTTCTTTAATTAAACATTACATCATTTTCCCCTTCCTTTCCTC  983

seq1  CCTTCAATCTCTCCATATTGTCCCGTTGCTGTCTCTCAAAACTATGCTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAATCTCTCCATATTGTCCCGTTGCTGTCTCTCAAAACTATGCTCT  1033

seq1  CTGTTTCTTTTGTTAAATGTGTGGGTGTGTGGGTGTGCATGTGTATATAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTTTTGTTAAATGTGTGGGTGTGTGGGTGTGCATGTGTATATAC  1083

seq1  ATACACAGCCTTCTCAGGTCAATCTAGTGTTCCTTGCTTATATACTAAAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGCCTTCTCAGGTCAATCTAGTGTTCCTTGCTTATATACTAAAA  1133

seq1  GCTTTTTTTTTTAATGTACTTTTTTGTCTGAATTC  1180
      |||||||||||||||||||||||||||||||||||
seq2  GCTTTTTTTTTTAATGTACTTTTTTGTCTGAATTC  1168

seq1: chr8_59469735_59469810
seq2: B6Ng01-075L14.g_76_151

seq1  TGAGGACACGAGGCCTTAGTGATTTCTAAACTTCCCCAAAGTAAAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACACGAGGCCTTAGTGATTTCTAAACTTCCCCAAAGTAAAGAAAC  50

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTG  76
      ||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTG  76