BAC Information

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BAC

Clone NameB6Ng01-075M10
Chromosome8 (Build37)
Map Location 45,594,967 - 45,772,988
singlet/doubletdoublet
Overlap genenone
Upstream geneAdam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Downstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3, Sorbs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075M10.bB6Ng01-075M10.g
ACCDH892237DH892238
length1,170208
definitionDH892237|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M10, 5' end.DH892238|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,771,830 - 45,772,988)(45,594,967 - 45,595,174)
sequence
gaattcagttagaaagaactgaaagcaaaagacatttgcttttcaaattc
gggaataacggaagttacaaatctaagaaagctttttcgaactgggcttt
ccccacggttctattttcactagatatggatatgtgcgatttttctccct
aagttgtggggtgttttagctcctgaaaacttttctcattaaatcgtctt
gttctttatttacttgggcctatggccacgtctggatgaggacagagtaa
atattgactcatgcagtgagctttctggacaatagctggagcagctagca
ttttaaagcctttccctaaactcaggaccacagtacctgagcacccaggg
agtgaccggtaactgaaccacagcacctcctgtggttgcacaaggaggcg
gggtccttctcagagaggtggacagcaactcacttggagtgaaccacgtg
acactaagagcgtacgtggttggaaagagcgttctaattatcccttcctc
tgaattctagactaatttctacgagttactgtgttcccagtgacctgggt
aggggcacacaacatctccaggccggcctgaatgaggcaaacagtgggaa
taagagagaagagatctcaacaggggagggtggcgccctcttcttggctg
cgggacaggatgtgacaatgtccaaagagaaaagcagggtcagggcagaa
aaagctaggctcagtgagtacctggaacccaaatgagacttacagcagaa
aaagagaatttcagctctgcagtggtagaggctcctctgtctaagccatt
tccggtctcctccatgtcctagtgcagtcctagtattaaccttcctgaag
ctgcgacccttcaacaccgtccctcatgttgtggtgatccccaaccatac
atttattttcgttgctacttcatgactgtaaatcttgctgctgctgtgaa
ttgcaatgtaaatattttaggagctagaggtttgccaagggggtgggggg
ggagtggtcatgactcaaaggtttgagaaccacctgtcctagaggcagcc
tcggactaggctttctatcccacctggctattaaccacgtcctgtcagct
ccaggtaccgaaagagttttgatggagtgtgccacctttcaggtaaagta
tgggttaatttcttaggagg
atgcagagcatcatttagaaacttatctataatctgtattttctccctcc
atactgagcagaaagctgcagatttccatattattttgaaattctctcct
tttctctgtctctctgactttctgtctctgtctctctgctttctctctgt
ctccctctccctgccttcctctctctctctctctctctctctctctctct
ctctgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45771830_45772988
seq2: B6Ng01-075M10.b_46_1215 (reverse)

seq1  CCTCCTTAGAAATTAACCTAT-CTTTACCT-ATAAGTTGCA-ACTCCATC  47
      |||||| ||||||||||| || |||||||| | | || ||| ||||||||
seq2  CCTCCTAAGAAATTAACCCATACTTTACCTGAAAGGTGGCACACTCCATC  50

seq1  AAAACTC-TTCGCTACCTTGAGCTGACAGGACGTG--TTATAGC--AGTG  92
      ||||||| |||| ||||| ||||||||||||||||  | |||||   |||
seq2  AAAACTCTTTCGGTACCTGGAGCTGACAGGACGTGGTTAATAGCCAGGTG  100

seq1  GGTATGAAAGCTTAGTCCGA-GCTGCCCTCTAGAACA-GTGGTTCTCAAA  140
      ||   |||||| |||||||| |||| ||||||| ||| ||||||||||||
seq2  GGATAGAAAGCCTAGTCCGAGGCTG-CCTCTAGGACAGGTGGTTCTCAAA  149

seq1  CCTTTGAGTCATGACCACT--CCCCCCACCCCCTTGGCAAACCTCTAGCT  188
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  CCTTTGAGTCATGACCACTCCCCCCCCACCCCCTTGGCAAACCTCTAGCT  199

seq1  CCTAAAATATTTACATTGCAATTCACAGCAGCAGCAAGATTTACAGTCAT  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATATTTACATTGCAATTCACAGCAGCAGCAAGATTTACAGTCAT  249

seq1  GAAGTAGCAACGAAAATAAATGTATGGTTGGGGATCACCACAACATGAGG  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGCAACGAAAATAAATGTATGGTTGGGGATCACCACAACATGAGG  299

seq1  GACGGTGTTGAAGGGTCGCAGCTTCAGGAAGGTTAATACTAGGACTGCAC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGTGTTGAAGGGTCGCAGCTTCAGGAAGGTTAATACTAGGACTGCAC  349

seq1  TAGGACATGGAGGAGACCGGAAATGGCTTAGACAGAGGAGCCTCTACCAC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACATGGAGGAGACCGGAAATGGCTTAGACAGAGGAGCCTCTACCAC  399

seq1  TGCAGAGCTGAAATTCTCTTTTTCTGCTGTAAGTCTCATTTGGGTTCCAG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCTGAAATTCTCTTTTTCTGCTGTAAGTCTCATTTGGGTTCCAG  449

seq1  GTACTCACTGAGCCTAGCTTTTTCTGCCCTGACCCTGCTTTTCTCTTTGG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCACTGAGCCTAGCTTTTTCTGCCCTGACCCTGCTTTTCTCTTTGG  499

seq1  ACATTGTCACATCCTGTCCCGCAGCCAAGAAGAGGGCGCCACCCTCCCCT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTCACATCCTGTCCCGCAGCCAAGAAGAGGGCGCCACCCTCCCCT  549

seq1  GTTGAGATCTCTTCTCTCTTATTCCCACTGTTTGCCTCATTCAGGCCGGC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGATCTCTTCTCTCTTATTCCCACTGTTTGCCTCATTCAGGCCGGC  599

seq1  CTGGAGATGTTGTGTGCCCCTACCCAGGTCACTGGGAACACAGTAACTCG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGATGTTGTGTGCCCCTACCCAGGTCACTGGGAACACAGTAACTCG  649

seq1  TAGAAATTAGTCTAGAATTCAGAGGAAGGGATAATTAGAACGCTCTTTCC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTAGTCTAGAATTCAGAGGAAGGGATAATTAGAACGCTCTTTCC  699

seq1  AACCACGTACGCTCTTAGTGTCACGTGGTTCACTCCAAGTGAGTTGCTGT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACGTACGCTCTTAGTGTCACGTGGTTCACTCCAAGTGAGTTGCTGT  749

seq1  CCACCTCTCTGAGAAGGACCCCGCCTCCTTGTGCAACCACAGGAGGTGCT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCTCTGAGAAGGACCCCGCCTCCTTGTGCAACCACAGGAGGTGCT  799

seq1  GTGGTTCAGTTACCGGTCACTCCCTGGGTGCTCAGGTACTGTGGTCCTGA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCAGTTACCGGTCACTCCCTGGGTGCTCAGGTACTGTGGTCCTGA  849

seq1  GTTTAGGGAAAGGCTTTAAAATGCTAGCTGCTCCAGCTATTGTCCAGAAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGGGAAAGGCTTTAAAATGCTAGCTGCTCCAGCTATTGTCCAGAAA  899

seq1  GCTCACTGCATGAGTCAATATTTACTCTGTCCTCATCCAGACGTGGCCAT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGCATGAGTCAATATTTACTCTGTCCTCATCCAGACGTGGCCAT  949

seq1  AGGCCCAAGTAAATAAAGAACAAGACGATTTAATGAGAAAAGTTTTCAGG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAAGTAAATAAAGAACAAGACGATTTAATGAGAAAAGTTTTCAGG  999

seq1  AGCTAAAACACCCCACAACTTAGGGAGAAAAATCGCACATATCCATATCT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAACACCCCACAACTTAGGGAGAAAAATCGCACATATCCATATCT  1049

seq1  AGTGAAAATAGAACCGTGGGGAAAGCCCAGTTCGAAAAAGCTTTCTTAGA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAATAGAACCGTGGGGAAAGCCCAGTTCGAAAAAGCTTTCTTAGA  1099

seq1  TTTGTAACTTCCGTTATTCCCGAATTTGAAAAGCAAATGTCTTTTGCTTT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACTTCCGTTATTCCCGAATTTGAAAAGCAAATGTCTTTTGCTTT  1149

seq1  CAGTTCTTTCTAACTGAATTC  1159
      |||||||||||||||||||||
seq2  CAGTTCTTTCTAACTGAATTC  1170

seq1: chr8_45594967_45595174
seq2: B6Ng01-075M10.g_76_283

seq1  ATGCAGAGCATCATTTAGAAACTTATCTATAATCTGTATTTTCTCCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGCATCATTTAGAAACTTATCTATAATCTGTATTTTCTCCCTCC  50

seq1  ATACTGAGCAGAAAGCTGCAGATTTCCATATTATTTTGAAATTCTCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAGCAGAAAGCTGCAGATTTCCATATTATTTTGAAATTCTCTCCT  100

seq1  TTTCTCTGTCTCTCTGACTTTCTGTCTCTGTCTCTCTGCTTTCTCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTCTCTCTGACTTTCTGTCTCTGTCTCTCTGCTTTCTCTCTGT  150

seq1  CTCCCTCTCCCTGCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCCCTGCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  200

seq1  CTCTGTCT  208
      ||||||||
seq2  CTCTGTCT  208