BAC Information

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BAC

Clone NameB6Ng01-076F08
Chromosome8 (Build37)
Map Location 40,001,638 - 40,002,539
singlet/doubletsinglet
Overlap genenone
Upstream geneSgcz
Downstream geneTusc3, LOC100038974, LOC632066, EG621335, LOC434304, Msr1, EG621431, LOC100039072
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076F08.bB6Ng01-076F08.g
ACCDH892632DH892633
length901215
definitionDH892632|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F08, 5' end.DH892633|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaagtccgtctaaaatattaccttatggctatagggctgtata
gacagtttttattgaaaggatcaataaccatgccgccaactcaggaacta
ctgattacaaaattcgccctttgtttctacaagtccagctactatttacc
caacatgaaattatccacactgccttactgtagactggtaacctgcttga
attctttgttcaagaataaccccgccatacagcctgctgttcacccagct
gctttactgtctgctgccgctattgttacagtctctccagggctggattg
cttcaagtggtctctccactttttatatagataatgaaatttagatccaa
gttctttcaccatacacagatgccatatggactctattatctaaactgtg
tgagcaactgaagcaatgttttatctgatcagtaataaaagtggaatgcc
taagatatgaagtgcattgatttccaaaggatgggtactatgattattag
gataaagaattattactactagctccctcactcatatttaagattaggtt
aaataggtcatatgtaataaaatacatgcactgctattccatgtgtgtat
gactaaaaaaatacaagtgtatttggatcattattgaatatggatagcta
cttatcatataacatttgttatattaataattgtttgaaatctcatagag
gattgtatgcattgttatcaaatccatccctattcttggccttccaagtc
ctcacctccctctcccaccactgttccctcccaaattcttgcattcatca
taaaaaaacaaccaagtccacttggttttgctaagatggccaggttgtga
gcatgtggcacagccactgagattggggagcaggggaggggggaaaggga
t
ctcagtgtgcaaacaagtaagtctctgtgtccctatctgggtcttatccc
ttgtattgtgctttctcctgttttgtcctattgcggtgtattagtttttt
tttgtttgtttgctttatctcattttaatttgttattatccctcagaagc
aagtttgtctcctaagaaagacataaagggagtagtagatctgaatggga
gtggtggtgggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_40001638_40002539
seq2: B6Ng01-076F08.b_49_949 (reverse)

seq1  ATCCCTTTCCCCCCTCCCCCTGCTCCCCAATCTCAGTGGCTGTGCCACAT  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATCCCTTTCCCCCCT-CCCCTGCTCCCCAATCTCAGTGGCTGTGCCACAT  49

seq1  GCTCACAACCTGGCCATCTTAGCAAAACCAAGTGGACTTGGTTGTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAACCTGGCCATCTTAGCAAAACCAAGTGGACTTGGTTGTTTTTT  99

seq1  TATGATGAATGCAAGAATTTGGGAGGGAACAGTGGTGGGAGAGGGAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGAATGCAAGAATTTGGGAGGGAACAGTGGTGGGAGAGGGAGGTG  149

seq1  AGGACTTGGAAGGCCAAGAATAGGGATGGATTTGATAACAATGCATACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTGGAAGGCCAAGAATAGGGATGGATTTGATAACAATGCATACAA  199

seq1  TCCTCTATGAGATTTCAAACAATTATTAATATAACAAATGTTATATGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTATGAGATTTCAAACAATTATTAATATAACAAATGTTATATGATA  249

seq1  AGTAGCTATCCATATTCAATAATGATCCAAATACACTTGTATTTTTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTATCCATATTCAATAATGATCCAAATACACTTGTATTTTTTTAG  299

seq1  TCATACACACATGGAATAGCAGTGCATGTATTTTATTACATATGACCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACACACATGGAATAGCAGTGCATGTATTTTATTACATATGACCTAT  349

seq1  TTAACCTAATCTTAAATATGAGTGAGGGAGCTAGTAGTAATAATTCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTAATCTTAAATATGAGTGAGGGAGCTAGTAGTAATAATTCTTTA  399

seq1  TCCTAATAATCATAGTACCCATCCTTTGGAAATCAATGCACTTCATATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATAATCATAGTACCCATCCTTTGGAAATCAATGCACTTCATATCT  449

seq1  TAGGCATTCCACTTTTATTACTGATCAGATAAAACATTGCTTCAGTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATTCCACTTTTATTACTGATCAGATAAAACATTGCTTCAGTTGCT  499

seq1  CACACAGTTTAGATAATAGAGTCCATATGGCATCTGTGTATGGTGAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGTTTAGATAATAGAGTCCATATGGCATCTGTGTATGGTGAAAGA  549

seq1  ACTTGGATCTAAATTTCATTATCTATATAAAAAGTGGAGAGACCACTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATCTAAATTTCATTATCTATATAAAAAGTGGAGAGACCACTTGA  599

seq1  AGCAATCCAGCCCTGGAGAGACTGTAACAATAGCGGCAGCAGACAGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCCAGCCCTGGAGAGACTGTAACAATAGCGGCAGCAGACAGTAAA  649

seq1  GCAGCTGGGTGAACAGCAGGCTGTATGGCGGGGTTATTCTTGAACAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGGTGAACAGCAGGCTGTATGGCGGGGTTATTCTTGAACAAAGA  699

seq1  ATTCAAGCAGGTTACCAGTCTACAGTAAGGCAGTGTGGATAATTTCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGCAGGTTACCAGTCTACAGTAAGGCAGTGTGGATAATTTCATGT  749

seq1  TGGGTAAATAGTAGCTGGACTTGTAGAAACAAAGGGCGAATTTTGTAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAATAGTAGCTGGACTTGTAGAAACAAAGGGCGAATTTTGTAATC  799

seq1  AGTAGTTCCTGAGTTGGCGGCATGGTTATTGATCCTTTCAATAAAAACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTCCTGAGTTGGCGGCATGGTTATTGATCCTTTCAATAAAAACTG  849

seq1  TCTATACAGCCCTATAGCCATAAGGTAATATTTTAGACGGACTTGTGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACAGCCCTATAGCCATAAGGTAATATTTTAGACGGACTTGTGAAT  899

seq1  TC  902
      ||
seq2  TC  901