BAC Information

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BAC

Clone NameB6Ng01-076G19
Chromosome8 (Build37)
Map Location 105,349,811 - 105,350,846
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh11
Downstream geneEG667618, LOC100041368, 1600027J07Rik, LOC100041397
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076G19.bB6Ng01-076G19.g
ACCDH892695DH892696
length1,2051,038
definitionDH892695|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G19, 5' end.DH892696|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggactatcgaatggctgagaaggaccctccttcatc
atcagggaaatgcaagtaaaaacaaccctgagtttctaccacacacaagt
cagaatggctgagatccaaaagtcaggtgacaacagatgctgacaaggtt
atgaagaaagaggaacactcctccgttgctggtgggattgcaagctagaa
accagtctggtggttcctcagaaaattgggcacagtactacttgagggca
cagctatactactcctgagcatatacccaaaagataatccaacctataac
aagaatacatggcctactatgctcatagcagccttatttataataatcag
agcaggaaagaacccagatgcccttgacaagagaaatggatacagaaaat
ttggtacatttacacaatggagtactactcagctatcaaaaacaatgaat
tcatgaaattcttaggcaaatggatggaactagaaaatatcatcctgagt
gaggtaacccaatcacaaaagaacacacatggtatactcttggtgataag
tggatgttagcccaaaagcttggaatatccaatatacaaattcacagacc
acatgaagctcaagaagaaggtagtccaaaatgtggatgtttcagtcctt
cttaaaagggggaacaaaatactcatgggaagaaatatggaggcaaagtg
tagagcagagactgacggaaaggacatccggagactgccacacctgggga
tctgtctcatatacagaaccaaccccagacactattgcagatgccaagaa
gtacttgctgagaggcacctgatatagctatctcctgagaagctctgcca
gagcctggaaaatacagaggcagatgcttgcaaccaaccattggactaag
caaggggtccacaatggaggagttagagaaaggacagaaagagctgaagg
ctttgcaactgtataggaagagcaatattatcaccaaccagacctcccgg
ggactaatcacaaacaaagagcaccacatggagcacccatggctcagctg
catatgtagcaagcatgaccttgttggacattaatgagaaggaaagcgcc
ttgattctgtgaaggctgatgctcatgttaagggaatgccaaggccggtg
ggggaaccctttataagcagggaagggctaaaggaatggggttcttgtgg
gtatc
gaattccatagcttgtgaatatcctcacatgtcacacatgtctagtctcc
taggtccgaatccttagcttcagctttcatttgctgttttccattacatt
ctgagtttcaggatctacctgagcattggatgtatcctatgttcccaaag
tagcattaaagaatacggaataagtccctttttaggtcaagattctcaga
gaacttcacgatataataaacaggaagaatgtaagggtcagaggataagg
aagagtattatagggcaaatgagtatcttctggagacgaagtggcatctg
ccatcataaactcactgcagctgcagtcaccagtataagtaatacatgag
attgagccaatccacttgacatctctatgggagatctgctcacaaagact
cattctctcctaaggactacgggctttaatggtttcttgaggaggatctg
tcattttcttccttgatgtagccattggtacattgaccatctccggtaaa
gaaactcacccctatgctcataaataacataattaaactcagtgggtcat
gaaaagagaatgagaaaaataaaaaatatatcaaagtgcagtgaagcctt
gttgggcagacagacaggtttcggaaggagagacatgggaggggcaattg
gggctgaaaacaatggaaaataatcaaaagtctttatatctttatgtaaa
attgtcagagaattttaagaagtttaaaatgaggccatgtggatttccct
agcttctttataaacttctaaggggaagtacatcactcaggtttaccctt
gctattcgacacttggtattttccactggaagaccaagaccctggatgtt
gtctttcagcactgtgaaggctctcttttcctatttttgcctactttgtt
tcctagtttctgtgtctccccttccccttcccactagcacttttctccag
ctcagctcaggtctacgtctttgtaagcagccattgtttatttgctttgg
agcccttctgaataaaattgcccagatgtgtatccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_105349811_105350846
seq2: B6Ng01-076G19.g_70_1107

seq1  GAATTCCATAGCTTGTGAATATCCTCACATGTCACACATGTCTAGTCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGCTTGTGAATATCCTCACATGTCACACATGTCTAGTCTCC  50

seq1  TAGGTCCGAATCCTTAGCTTCAGCTTTCATTTGCTGTTTTCCATTACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCCGAATCCTTAGCTTCAGCTTTCATTTGCTGTTTTCCATTACATT  100

seq1  CTGAGTTTCAGGATCTACCTGAGCATTGGATGTATCCTATGTTCCCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTCAGGATCTACCTGAGCATTGGATGTATCCTATGTTCCCAAAG  150

seq1  TAGCATTAAAGAATACGGAATAAGTCCCTTTTTAGGTCAAGATTCTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTAAAGAATACGGAATAAGTCCCTTTTTAGGTCAAGATTCTCAGA  200

seq1  GAACTTCACGATATAATAAACAGGAAGAATGTAAGGGTCAGAGGATAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCACGATATAATAAACAGGAAGAATGTAAGGGTCAGAGGATAAGG  250

seq1  AAGAGTATTATAGGGCAAATGAGTATCTTCTGGAGACGAAGTGGCATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTATTATAGGGCAAATGAGTATCTTCTGGAGACGAAGTGGCATCTG  300

seq1  CCATCATAAACTCACTGCAGCTGCAGTCACCAGTATAAGTAATACATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATAAACTCACTGCAGCTGCAGTCACCAGTATAAGTAATACATGAG  350

seq1  ATTGAGCCAATCCACTTGACATCTCTATGGGAGATCTGCTCACAAAGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCCAATCCACTTGACATCTCTATGGGAGATCTGCTCACAAAGACT  400

seq1  CATTCTCTCCTAAGGACTACGGGCTTTAATGGTTTCTTGAGGAGGATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTCCTAAGGACTACGGGCTTTAATGGTTTCTTGAGGAGGATCTG  450

seq1  TCATTTTCTTCCTTGATGTAGCCATTGGTACATTGACCATCTCCGGTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCTTCCTTGATGTAGCCATTGGTACATTGACCATCTCCGGTAAA  500

seq1  GAAACTCACCCCTATGCTCATAAATAACATAATTAAACTCAGTGGGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCACCCCTATGCTCATAAATAACATAATTAAACTCAGTGGGTCAT  550

seq1  GAAAAGAGAATGAGAAAAATAAAAAATATATCAAAGTGCAGTGAAGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGAATGAGAAAAATAAAAAATATATCAAAGTGCAGTGAAGCCTT  600

seq1  GTTGGGCAGACAGACAGGTTTCGGAAGGAGAGACATGGGAGGGGCAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGCAGACAGACAGGTTTCGGAAGGAGAGACATGGGAGGGGCAATTG  650

seq1  GGGCTGAAAACAATGGAAAATAATCAAAAGTCTTTATATCTTTATGTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAAAACAATGGAAAATAATCAAAAGTCTTTATATCTTTATGTAAA  700

seq1  ATTGTCAGAGAATTTTAAGAAGTTTAAAATGAGGCCATGTGGATTTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCAGAGAATTTTAAGAAGTTTAAAATGAGGCCATGTGGATTTCCCT  750

seq1  AGCTTCTTTATAAACTTCTAAGGGGAAGTACATCACTCAGGTTTACCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTTTATAAACTTCTAAGGGGAAGTACATCACTCAGGTTTACCCTT  800

seq1  GCTATTCGACACTTGGTATTTTCCACTGGAAGACCAAGACCCTGGATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCGACACTTGGTATTTTCCACTGGAAGACCAAGACCCTGGATGTT  850

seq1  GTCTTTCAGCACTGTGAAGGCTCTCTTTTCCTATTTTTGCCTACTTTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCAGCACTGTGAAGGCTCTCTTTTCCTATTTTTGCCTACTTTGTT  900

seq1  TCCTAGTTTCTGTGTCTCCCC-TCCCCTTCCCACTAGCACTTTTCTCCAG  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCTAGTTTCTGTGTCTCCCCTTCCCCTTCCCACTAGCACTTTTCTCCAG  950

seq1  CTTCAGCTCAGGTCTACGTCTTTGTAAGGCAGCCA-TGTTTATTTGCTTT  998
      | ||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  C-TCAGCTCAGGTCTACGTCTTTGTAA-GCAGCCATTGTTTATTTGCTTT  998

seq1  GGAGCTCATCTG-ATAAAATTGCCCAGATGTG-ATCCCCC  1036
      ||||| | |||| ||||||||||||||||||| |||||||
seq2  GGAGCCCTTCTGAATAAAATTGCCCAGATGTGTATCCCCC  1038