BAC Information

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BAC

Clone NameB6Ng01-076H17
Chromosome8 (Build37)
Map Location 36,029,668 - 36,179,392
singlet/doubletdoublet
Overlap geneLOC666792
Upstream geneRbpms, LOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66, LOC619780, LOC666718, EG234159, LOC666746, Dusp4, LOC675578, Tnks
Downstream geneLOC666797, LOC666804, Ppp1r3b, Thex1, Mfhas1, LOC100041572, Gm501, Cldn23, LOC671641, D8Ertd82e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076H17.bB6Ng01-076H17.g
ACCDH892736DH892737
length336692
definitionDH892736|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H17, 5' end.DH892737|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,029,668 - 36,030,003)(36,178,702 - 36,179,392)
sequence
cttaagattaacaaacctcaggacatacagaacataacaggggatgtgac
cagcatgacccttctctgagtcaaactatttttctatgtcaaaggctggt
aggcatattacagcaacaatatgaaatagctggcaagcatggaacaaaat
ggccgcaactatgctagtgggtcaggaggacacaccgcttggtttgtctc
ttcagagttaaatctgactaaggatgctctgagaggcatgcaagactcac
tggcattgggagtatgcaaacctaactagacagagaataagaagggacag
gaatgagcaatgggggagcggggtgggggaggggga
gaattctcctcaagttgttgttcatagaccagaacacaattatcaaattg
caggtgacatttttttttttagtccctctgtgtcaggaagagatatttct
tcagggaactagatgcagaggcatgaatgaacaaaccacaagggaaaaat
agatttcatttcctgcagtcttaaacagactgcccaacatgctacagttg
tttctttctttctttttaaaaatttttttaaagatttatttattattata
tctaagtacactgtagctacagctgtttctaccaattctttaggtgtact
ctgaccctacagctagcttaagtggttccaggaatgtatttgccatgtgg
gctggctaatcttatgccgacttgacacacaacctagagtcatcaaagag
gagagcacctggaaaaagaaaatgcctccacgagatctacctgtaaggca
ttttctcaattagtgatcaatggggggtggggggcagcccattgtgggtg
gtgctatccctgggctggtggttctgggttctgtaagaaagcaggctgag
caagccatggggagcaagcaaataagcagcacccctccatggctctccat
caatgtctccctcaaggttcctgcactgcttaagatccagtcctgacttc
ctttggggatgaacgtggtttaaaagattatatgcggcatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_36029668_36030003
seq2: B6Ng01-076H17.b_49_384

seq1  CTTAAGATTAACAAACCTCAGGACATACAGAACATAACAGGGGATGTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGATTAACAAACCTCAGGACATACAGAACATAACAGGGGATGTGAC  50

seq1  CAGCATGACCCTTCTCTGAGTCAAACTATTTTTCTATGTCAAAGGCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGACCCTTCTCTGAGTCAAACTATTTTTCTATGTCAAAGGCTGGT  100

seq1  AGGCATATTACAGCAACAATATGAAATAGCTGGCAAGCATGGAACAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATATTACAGCAACAATATGAAATAGCTGGCAAGCATGGAACAAAAT  150

seq1  GGCCGCAACTATGCTAGTGGGTCAGGAGGACACACCGCTTGGTTTGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGCAACTATGCTAGTGGGTCAGGAGGACACACCGCTTGGTTTGTCTC  200

seq1  TTCAGAGTTAAATCTGACTAAGGATGCTCTGAGAGGCATGCAAGACTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTTAAATCTGACTAAGGATGCTCTGAGAGGCATGCAAGACTCAC  250

seq1  TGGCATTGGGAGTATGCAAACCTAACTAGACAGAGAATAAGAAGGGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGGGAGTATGCAAACCTAACTAGACAGAGAATAAGAAGGGACAG  300

seq1  GAATGAGCAATGGGGGAGCGGGGTGGGGGAGGGGGA  336
      ||||||||||||||||||||||||||||||||||||
seq2  GAATGAGCAATGGGGGAGCGGGGTGGGGGAGGGGGA  336

seq1: chr8_36178702_36179392
seq2: B6Ng01-076H17.g_70_761 (reverse)

seq1  CCATGCCGCATATAATC-TTTAAACCACGTTCATCCCCAAAGGAAGTCAG  49
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCATGCCGCATATAATCTTTTAAACCACGTTCATCCCCAAAGGAAGTCAG  50

seq1  GACTGGATCTTAAGCAGTGCAGGAACCTTGAGGGAGACATTGATGGAGAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGATCTTAAGCAGTGCAGGAACCTTGAGGGAGACATTGATGGAGAG  100

seq1  CCATGGAGGGGTGCTGCTTATTTGCTTGCTCCCCATGGCTTGCTCAGCCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAGGGGTGCTGCTTATTTGCTTGCTCCCCATGGCTTGCTCAGCCT  150

seq1  GCTTTCTTACAGAACCCAGAACCACCAGCCCAGGGATAGCACCACCCACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTACAGAACCCAGAACCACCAGCCCAGGGATAGCACCACCCACA  200

seq1  ATGGGCTGCCCCCCACCCCCCATTGATCACTAATTGAGAAAATGCCTTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGCCCCCCACCCCCCATTGATCACTAATTGAGAAAATGCCTTAC  250

seq1  AGGTAGATCTCGTGGAGGCATTTTCTTTTTCCAGGTGCTCTCCTCTTTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGATCTCGTGGAGGCATTTTCTTTTTCCAGGTGCTCTCCTCTTTGA  300

seq1  TGACTCTAGGTTGTGTGTCAAGTCGGCATAAGATTAGCCAGCCCACATGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTAGGTTGTGTGTCAAGTCGGCATAAGATTAGCCAGCCCACATGG  350

seq1  CAAATACATTCCTGGAACCACTTAAGCTAGCTGTAGGGTCAGAGTACACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACATTCCTGGAACCACTTAAGCTAGCTGTAGGGTCAGAGTACACC  400

seq1  TAAAGAATTGGTAGAAACAGCTGTAGCTACAGTGTACTTAGATATAATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATTGGTAGAAACAGCTGTAGCTACAGTGTACTTAGATATAATAA  450

seq1  TAAATAAATCTTTAAAAAAATTTTTAAAAAGAAAGAAAGAAACAACTGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATCTTTAAAAAAATTTTTAAAAAGAAAGAAAGAAACAACTGTA  500

seq1  GCATGTTGGGCAGTCTGTTTAAGACTGCAGGAAATGAAATCTATTTTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTGGGCAGTCTGTTTAAGACTGCAGGAAATGAAATCTATTTTTCC  550

seq1  CTTGTGGTTTGTTCATTCATGCCTCTGCATCTAGTTCCCTGAAGAAATAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGTTTGTTCATTCATGCCTCTGCATCTAGTTCCCTGAAGAAATAT  600

seq1  CTCTTCCTGACACAGAGGGACTAAAAAAAAAAATGTCACCTGCAATTTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTGACACAGAGGGACTAAAAAAAAAAATGTCACCTGCAATTTGA  650

seq1  TAATTGTGTTCTGGTCTATGAACAACAACTAGAGGAGAATTC  691
      |||||||||||||||||||||||||||||| |||||||||||
seq2  TAATTGTGTTCTGGTCTATGAACAACAACTTGAGGAGAATTC  692