BAC Information

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BAC

Clone NameB6Ng01-076J02
Chromosome12 (Build37)8 (Build37)
Map Location 66,795,399 - 66,796,0819,554,839 - 9,555,409
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407, Wdr20b
Downstream geneLOC100040700, EG238217, Mdga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076J02.bB6Ng01-076J02.g
ACCDH892800DH892801
length683694
definitionDH892800|Mus musculus domesticus DNA, BAC clone: B6Ng01-076J02, 5' end.DH892801|Mus musculus domesticus DNA, BAC clone: B6Ng01-076J02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(66,795,399 - 66,796,081)(9,554,839 - 9,555,409)
sequence
gaattctgggcagggttcaatttaaatagtttctgttggggtgcagtgtt
acaatttctatcttgagaaaaacagaatgaaactctgttcacaattctag
gaggaataaaagtctctgtcactcctagggatacagtgagtcaccagaag
gccaagaggaatggtgatacagaaaagcagtaggcaaatcaaaactactt
tgagatttttatcttgtactcacaaaaattggtaagatcagtaaaacaaa
tgacagcccatgctcttgatgacgtggagtaaatagaactcttatccatt
gctgggtttgccaacttgtacacccactatgaaatcagtatggtggtacc
tcaggaatatgggaattaatctaccccaagattcaactatactactcctg
gatatatacccaaagaatgcttcatcataccacagaggcacttgctcagc
aaagttcatttatgatctacttctaatagaaattggaaacagtctagatg
tctgccaacagatgaaggaacaaagaaaaagtggaaagtttatgcaatgg
tatattacctagttgttaacaagaatgaaattcactgataagtggatgga
actagaaaaaaaaattatgctgagtgtggtagcctagacctagagagaca
aatatcacatgtatttggttatatgcatgtggc
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccattttcgtccaggttttcc
agttttgttgagtatagcctttttgtagaaggctctgatggtgtttggat
ttcttcaggatctgttgttatgtctccccttttcatttctgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_66795399_66796081
seq2: B6Ng01-076J02.b_48_730

seq1  GAATTCTGGGCAGGGTTCAATTTAAATAGTTTCTGTTGGGGTGCAGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCAGGGTTCAATTTAAATAGTTTCTGTTGGGGTGCAGTGTT  50

seq1  ACAATTTCTATCTTGAGAAAAACAGAATGAAACTCTGTTCACAATTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTCTATCTTGAGAAAAACAGAATGAAACTCTGTTCACAATTCTAG  100

seq1  GAGGAATAAAAGTCTCTGTCACTCCTAGGGATACAGTGAGTCACCAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATAAAAGTCTCTGTCACTCCTAGGGATACAGTGAGTCACCAGAAG  150

seq1  GCCAAGAGGAATGGTGATACAGAAAAGCAGTAGGCAAATCAAAACTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAGGAATGGTGATACAGAAAAGCAGTAGGCAAATCAAAACTACTT  200

seq1  TGAGATTTTTATCTTGTACTCACAAAAATTGGTAAGATCAGTAAAACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTTTTATCTTGTACTCACAAAAATTGGTAAGATCAGTAAAACAAA  250

seq1  TGACAGCCCATGCTCTTGATGACGTGGAGTAAATAGAACTCTTATCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCCCATGCTCTTGATGACGTGGAGTAAATAGAACTCTTATCCATT  300

seq1  GCTGGGTTTGCCAACTTGTACACCCACTATGAAATCAGTATGGTGGTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTTGCCAACTTGTACACCCACTATGAAATCAGTATGGTGGTACC  350

seq1  TCAGGAATATGGGAATTAATCTACCCCAAGATTCAACTATACTACTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAATATGGGAATTAATCTACCCCAAGATTCAACTATACTACTCCTG  400

seq1  GATATATACCCAAAGAATGCTTCATCATACCACAGAGGCACTTGCTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATACCCAAAGAATGCTTCATCATACCACAGAGGCACTTGCTCAGC  450

seq1  AAAGTTCATTTATGATCTACTTCTAATAGAAATTGGAAACAGTCTAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCATTTATGATCTACTTCTAATAGAAATTGGAAACAGTCTAGATG  500

seq1  TCTGCCAACAGATGAAGGAACAAAGAAAAAGTGGAAAGTTTATGCAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAACAGATGAAGGAACAAAGAAAAAGTGGAAAGTTTATGCAATGG  550

seq1  TATATTACCTAGTTGTTAACAAGAATGAAATTCACTGATAAGTGGATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTACCTAGTTGTTAACAAGAATGAAATTCACTGATAAGTGGATGGA  600

seq1  ACTAGAAAAAAAAATTATGCTGAGTGTGGTAGCCTAGACCTAGAGAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAAAAAAAATTATGCTGAGTGTGGTAGCCTAGACCTAGAGAGACA  650

seq1  AATATCACATGTATTTGGTTATATGCATGTGGC  683
      |||||||||||||||||||||||||||||||||
seq2  AATATCACATGTATTTGGTTATATGCATGTGGC  683

seq1: chr8_9554839_9555409
seq2: B6Ng01-076J02.g_195_767 (reverse)

seq1  AATCAGAAATGAAAA-GGGAGACATAACAACAGATCCTGAAGAAATCCAA  49
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  AATCAGAAATGAAAAGGGGAGACATAACAACAGATCCTGAAGAAATCC-A  49

seq1  AACACCATCAGATCCTTCTAC-AAAAGGCTATACTCAACAAAACTGGAAA  98
      |||||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  AACACCATCAGAGCCTTCTACAAAAAGGCTATACTCAACAAAACTGGAAA  99

seq1  ACCTGGACG-AAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTT  147
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGACGAAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTT  149

seq1  GAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAA  199

seq1  TAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGAC  249

seq1  GGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGT  299

seq1  TCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACT  349

seq1  CATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCA  399

seq1  ACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCAAA  449

seq1  AATCCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAA  499

seq1  TCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTT  549

seq1  AATATACGAAAATCCATCAATGTA  571
      ||||||||||||||||||||||||
seq2  AATATACGAAAATCCATCAATGTA  573