BAC Information

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BAC

Clone NameB6Ng01-076M21
Chromosome8 (Build37)
Map Location 85,019,221 - 85,020,293
singlet/doubletsinglet
Overlap genenone
Upstream geneInpp4b, LOC671182, Il15
Downstream geneEG666564, LOC675800, EG666289, Zfp330, Rnf150, LOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076M21.bB6Ng01-076M21.g
ACCDH892962DH892963
length8501,094
definitionDH892962|Mus musculus domesticus DNA, BAC clone: B6Ng01-076M21, 5' end.DH892963|Mus musculus domesticus DNA, BAC clone: B6Ng01-076M21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagcccccttttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaatttttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
ttttcctttgagaagagtttttttgctatcctaggtttttttgtttattt
ccagatgaatttgcaaattgcttcctttctaattcgtttgaaagaatttg
agtttggaatttttgaatggggattgcattgaatctgttagatttgcttt
tttggcaagatagccattttttacaattgtttgattcctgccaattccat

gaattccagtcacgagtcttaatcttttatggtcccacaaagaagcatta
cacatgtgagcagccttcatcttgtgggtgatttccctgaagcaccccat
acacagacaaaggaagtaacacaaagagataaataggtaggtgttgtgac
cacttcatgactcatgacagaaacaaagtatttctacatctgtatggtaa
ttattagtaaatttgacttcttttcagctgtttagagaggcagctgcaat
taaggcttttatactagagactaaaggtgactttctttttattttatgtt
ccattgtgacaaaatagccttaagaaaataacacaaggagaaatcatttg
tgttggctcacaacttaaagatacagacagcagaaagaccctaacattgg
caagatgaggtagcaggtctcatcatactcccagttgaggactttttatg
cattcacacaccaaagcccaggacagaggtactgccttcttttaagatag
gcctttccacctgaattaccttacagagataatccctcacagacatgctc
atgggctacactcacccaaacagcaccacacaggtatgtctggggaagct
tgtcttctaagggattccaaatcttgtcaagttgacattcagcactactc
acataagtgggtgtcaaataatcttcctcgtttggtattttctttaaaag
tgaaaacactgctaattttatacaactaggttttatagagaaaaatctgt
cacccattaaaagattttttccaacttgcttggtcatgggcatatatatg
actaccctgcttacatgtcaagcagcaaaataagaaaattgttaacaaat
aagaaacagaggggtgggggtgaagaaatgtagcataccatttagattta
attgcaggagcaactatctactctacacagggatcatggagcaggcaaaa
taatgggtagcaaccaagactatttgccaatgtcatgcttcaggcaaaat
cttaagtaaaaaattgaaaaaaacagaacagtaccaccagtggcaaattt
attaaagcctcatatttgggattggttcaagacaggtaaatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85019221_85020293
seq2: B6Ng01-076M21.g_70_1162

seq1  GAATTCCAGTCACGAGTCTTAATCTTTTATGGTCCCACAAAGAAGCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCACGAGTCTTAATCTTTTATGGTCCCACAAAGAAGCATTA  50

seq1  CACATGTGAGCAGCCTTCATCTTGTGGGTGATTTCCCTGAAGCACCCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGAGCAGCCTTCATCTTGTGGGTGATTTCCCTGAAGCACCCCAT  100

seq1  ACACAGACAAAGGAAGTAACACAAAGAGATAAATAGGTAGGTGTTGTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACAAAGGAAGTAACACAAAGAGATAAATAGGTAGGTGTTGTGAC  150

seq1  CACTTCATGACTCATGACAGAAACAAAGTATTTCTACATCTGTATGGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCATGACTCATGACAGAAACAAAGTATTTCTACATCTGTATGGTAA  200

seq1  TTATTAGTAAATTTGACTTCTTTTCAGCTGTTTAGAGAGGCAGCTGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTAAATTTGACTTCTTTTCAGCTGTTTAGAGAGGCAGCTGCAAT  250

seq1  TAAGGCTTTTATACTAGAGACTAAAGGTGACTTTCTTTTTATTTTATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTTTTATACTAGAGACTAAAGGTGACTTTCTTTTTATTTTATGTT  300

seq1  CCATTGTGACAAAATAGCCTTAAGAAAATAACACAAGGAGAAATCATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTGACAAAATAGCCTTAAGAAAATAACACAAGGAGAAATCATTTG  350

seq1  TGTTGGCTCACAACTTAAAGATACAGACAGCAGAAAGACCCTAACATTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCTCACAACTTAAAGATACAGACAGCAGAAAGACCCTAACATTGG  400

seq1  CAAGATGAGGTAGCAGGTCTCATCATACTCCCAGTTGAGGACTTTTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGAGGTAGCAGGTCTCATCATACTCCCAGTTGAGGACTTTTTATG  450

seq1  CATTCACACACCAAAGCCCAGGACAGAGGTACTGCCTTCTTTTAAGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACACACCAAAGCCCAGGACAGAGGTACTGCCTTCTTTTAAGATAG  500

seq1  GCCTTTCCACCTGAATTACCTTACAGAGATAATCCCTCACAGACATGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCACCTGAATTACCTTACAGAGATAATCCCTCACAGACATGCTC  550

seq1  ATGGGCTACACTCACCCAAACAGCACCACACAGGTATGTCTGGGGAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTACACTCACCCAAACAGCACCACACAGGTATGTCTGGGGAAGCT  600

seq1  TGTCTTCTAAGGGATTCCAAATCTTGTCAAGTTGACATTCAGCACTACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTAAGGGATTCCAAATCTTGTCAAGTTGACATTCAGCACTACTC  650

seq1  ACATAAGTGGGTGTCAAATAATCTTCCTCGTTTGGTA-TTTCTTTAAAAG  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACATAAGTGGGTGTCAAATAATCTTCCTCGTTTGGTATTTTCTTTAAAAG  700

seq1  TGAAAACACTGCTAATTTTATACAACTAGGTTTTATAGAGAAAAATCTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACACTGCTAATTTTATACAACTAGGTTTTATAGAGAAAAATCTGT  750

seq1  CACCCATTAAAAGA-TTTTTCCAACTTGCTTGGTCAT-GGCATATATATG  797
      |||||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  CACCCATTAAAAGATTTTTTCCAACTTGCTTGGTCATGGGCATATATATG  800

seq1  ACTA-CCTGCTTACATGTCAAGCAGC-AAATAAGAAAACTGTTAACAAAT  845
      |||| ||||||||||||||||||||| ||||||||||| |||||||||||
seq2  ACTACCCTGCTTACATGTCAAGCAGCAAAATAAGAAAATTGTTAACAAAT  850

seq1  AAGAAACAGAGGG--TGGGGTGAAGAAATGTAGCATACCATTTAGATTTA  893
      |||||||||||||   ||||||||||||||||||||||||||||||||||
seq2  AAGAAACAGAGGGGTGGGGGTGAAGAAATGTAGCATACCATTTAGATTTA  900

seq1  A-TGCAGGAGCAACTATCTACTCTACACA-GGATCATGGAGCAAGCAAAA  941
      | ||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  ATTGCAGGAGCAACTATCTACTCTACACAGGGATCATGGAGCAGGCAAAA  950

seq1  TAATGGGTAGCAA-CAAGACTA-TTGCCAAATGCATGCTTCAAGCAAAAT  989
      ||||||||||||| |||||||| |||||||   ||||||||| |||||||
seq2  TAATGGGTAGCAACCAAGACTATTTGCCAATGTCATGCTTCAGGCAAAAT  1000

seq1  C-TAAGTAAAAAATAG-AAAAAACAGAACAGTACCA-CAGTGGCAAATTT  1036
      | |||||||||||| | ||||||||||||||||||| |||||||||||||
seq2  CTTAAGTAAAAAATTGAAAAAAACAGAACAGTACCACCAGTGGCAAATTT  1050

seq1  ATTAA--GCTCATATT--GGAT--GTTC-AGACAGGTTAAATGA  1073
      |||||   ||||||||  ||||  |||| ||||||| |||||||
seq2  ATTAAAGCCTCATATTTGGGATTGGTTCAAGACAGG-TAAATGA  1093