BAC Information

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BAC

Clone NameB6Ng01-077L10
Chromosome8 (Build37)
Map Location 69,837,730 - 70,004,898
singlet/doubletdoublet
Overlap genenone
Upstream geneMarch1, 1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
Downstream geneNat1, Nat2, LOC100041265, Nat3, Psd3, Sh2d4a, LOC665510, 4732435N03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077L10.bB6Ng01-077L10.g
ACCDH893616DH893617
length1,2421,077
definitionDH893616|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L10, 5' end.DH893617|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,003,642 - 70,004,898)(69,837,730 - 69,838,816)
sequence
gaattctgcttcctgatcttcctgtgaaacagggtttcgaagcacactgc
aaatcggtctggcagccagcaagctatgcctcccgtgtagcagggcctgt
gacctggaagctggtaggaggccgagctctgcagaggaagagctcattgg
ctgcccaaattgccctgccccaaggttcgttagaatattcccctggctct
ctgggaactgtagttgcaggatcctgtttgtctgtgggccactttaatct
tttactgagaatggacttaggtagtactgtctgacgattctcatgcctca
gattgtgagggtctctgtgattcatggtgttacggcccgcagtgagcctg
aagtcagacgattacggagtgatgttctaaagtcagaacatggcaaaggt
ctaggcaaagtagatccagaacgtagggaggcaggagaggctggtatatt
ttattcacagtaccagtttatcacagtcttattattccagtctttatctt
tctttccaatctgaaacccacttccttttacatcgctacctaaaggcaca
aggtaatgtcagaaatatatctatggatgtgatatcggctccattctgct
catattctcaaattatagtaatagcgttagactacaattcttgatgtgtc
ttagatatatccacctatgttataaatatatgcaatatataatatattta
tctaacgtataaatgaaatatatacacatatataatttatattagcgtag
caaaaatgagttttattagagaatctttaaaacagtttgttttcatagtt
tctctccacacttctttcccatcttcttctcctcccgcagcttccctttc
atcttcagaggacagaggatcttccccctccttttttcttttttcaaaca
ccccgttcccttctcacactctctgatatagtttcataatctatgcccac
tctcacatctccttatatacatacatatatcattaaacttaggacatgca
tatgaagaggggcatggaaggtgatccccacttaatacaatgcttgccag
ttttgcttatttttcttgccaatgaatttctaatgctatttctcttgtaa
atccaatggggtgaacgttatccaattccttctggtgatggacatctggt
gggatctagtccctggcgttggacaagggcgatggaatctggacctgcaa
tttcttggatcaggcgttaggcgatgcaggcacactggattt
gaattctctcccttgacatccttaacaatggcttgtgagctgtaatgttt
cggattgggttatatattacagtgaaaatattaggcaaggcacacatgaa
catcaattttggaaaatatagcctctgttctttcacttggagcctgtgct
ttcatttcatttactttctgatagttaaagttttgaaggcatatttgaat
agaagtatttaagcaataaagttcagggctatttatttttgccaagaaca
tagtttctaccaattagtggcttatttaattattgtgaaattagacaagc
acaatcaatgataggaaataattcttgccaactcataatacatccctgct
atctgacattttggattgttctaatcaataatgaatcaatgcaacttagc
tctaccacgcaaaaatcttcacgatgttgtgatactaaaaataaaaccag
atgaataatctcccaaattttaagattttattcaataaggtttgtcttca
gacactcaggtagttaagagtgtgtataatgggagcatgatcacatttac
atttcttttatagggcatttcacctcataaaggaagaggtgaatcatata
tgttagtacaagtaaacaaatgtcacaggactacctaaccactttcttat
taaagtcttgctccacaagatgaaattcatatctagtaccattcctgggc
caaatgcctgtggtttgacaagtcatgggttctagggagaaacctactac
tattactctaagtaggcatggtattaaacctactcttaatgttttatctt
tatgcccatagattaatgcatctctcagccctcattagaggaatttctat
ctgcagtaaatgatgatcaatagagacccataactagccagtttgcagag
actaaaggaattgcagattctcagccctaagtagaacattcatattgtgt
tccctcattccaggctcaggaccactgtagagtataagagtcagacaagt
ggatgattgcaggaaagagatgttgccacatgtgactcatcgagctgtga
tagcatggacaagatctgtgcagtcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_70003642_70004898
seq2: B6Ng01-077L10.b_44_1285 (reverse)

seq1  AAATACCAGTTGTGCCTGCAT-GCCTAAACGACTTTAGATTACCACAGAT  49
      |||| |||| ||||||||||| |||| |||| ||   |||  ||| ||| 
seq2  AAAT-CCAG-TGTGCCTGCATCGCCT-AACGCCT---GAT--CCA-AGA-  40

seq1  ATATTTGCACGTCAGTATTTCCTACTGCCCTCGTCACAACAGCAAGGGAC  99
        | ||||| |||   |||  | |  ||||| ||| |||| || ||||||
seq2  --AATTGCAGGTCCAGATT--CCATCGCCCTTGTC-CAAC-GCCAGGGAC  84

seq1  TAGGATCCACCAGGATGTCCATCAACAGAAG--AATGGATAACGTTCACA  147
      |||   |||||| ||||||||||| ||||||  | |||||||||||||| 
seq2  TAGATCCCACCA-GATGTCCATCACCAGAAGGAATTGGATAACGTTCACC  133

seq1  CAATGGAATTTTACAAAGAG-AATAGCATTAGAAA-TCATTTGC-AGGAA  194
      | || | | ||||| ||||| |||||||||||||| ||||| || || ||
seq2  CCATTGGA-TTTAC-AAGAGAAATAGCATTAGAAATTCATTGGCAAGAAA  181

seq1  AATAAGCAGAACTGGCAAGCATTGTATTAAGT-GAGATCA-CTTCCATGC  242
      |||||||| ||||||||||||||||||||||| | ||||| |||||||||
seq2  AATAAGCAAAACTGGCAAGCATTGTATTAAGTGGGGATCACCTTCCATGC  231

seq1  TCTCTTTCATATGCATGTCCTAAGTTTTAATGATTATATGTATGTATATA  292
       |   ||||||||||||||||||| |||||||| ||||||||||||||||
seq2  CCCTCTTCATATGCATGTCCTAAG-TTTAATGA-TATATGTATGTATATA  279

seq1  AGGAGATGTGAGAGTGGGCATAGATTATGAAACTATATCAGAGAGTGTGA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGTGAGAGTGGGCATAGATTATGAAACTATATCAGAGAGTGTGA  329

seq1  GAAGGGAACGGGGTGTTTTGAAAAAAAGAAAAAAGGAGGGGGAAGATCCT  392
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  GAAGGGAACGGGGTGTTT--GAAAAAAGAAAAAAGGAGGGGGAAGATCCT  377

seq1  CTGTCCTCTGAAGATGAAAGGGAAGCTGCGGGAGGAGAAGAAGATGGGAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCTGAAGATGAAAGGGAAGCTGCGGGAGGAGAAGAAGATGGGAA  427

seq1  AGAAGTGTGGAGAGAAACTATGAAAACAAACTGTTTTAAAGATTCTCTAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTGGAGAGAAACTATGAAAACAAACTGTTTTAAAGATTCTCTAA  477

seq1  TAAAACTCATTTTTGCTACGCTAATATAAATTATATATGTGTATATATTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCATTTTTGCTACGCTAATATAAATTATATATGTGTATATATTT  527

seq1  CATTTATACGTTAGATAAATATATTATATATTGCATATATTTATAACATA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATACGTTAGATAAATATATTATATATTGCATATATTTATAACATA  577

seq1  GGTGGATATATCTAAGACACATCAAGAATTGTAGTCTAACGCTATTACTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATATATCTAAGACACATCAAGAATTGTAGTCTAACGCTATTACTA  627

seq1  TAATTTGAGAATATGAGCAGAATGGAGCCGATATCACATCCATAGATATA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGAGAATATGAGCAGAATGGAGCCGATATCACATCCATAGATATA  677

seq1  TTTCTGACATTACCTTGTGCCTTTAGGTAGCGATGTAAAAGGAAGTGGGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACATTACCTTGTGCCTTTAGGTAGCGATGTAAAAGGAAGTGGGT  727

seq1  TTCAGATTGGAAAGAAAGATAAAGACTGGAATAATAAGACTGTGATAAAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTGGAAAGAAAGATAAAGACTGGAATAATAAGACTGTGATAAAC  777

seq1  TGGTACTGTGAATAAAATATACCAGCCTCTCCTGCCTCCCTACGTTCTGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTGTGAATAAAATATACCAGCCTCTCCTGCCTCCCTACGTTCTGG  827

seq1  ATCTACTTTGCCTAGACCTTTGCCATGTTCTGACTTTAGAACATCACTCC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTTGCCTAGACCTTTGCCATGTTCTGACTTTAGAACATCACTCC  877

seq1  GTAATCGTCTGACTTCAGGCTCACTGCGGGCCGTAACACCATGAATCACA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCGTCTGACTTCAGGCTCACTGCGGGCCGTAACACCATGAATCACA  927

seq1  GAGACCCTCACAATCTGAGGCATGAGAATCGTCAGACAGTACTACCTAAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCTCACAATCTGAGGCATGAGAATCGTCAGACAGTACTACCTAAG  977

seq1  TCCATTCTCAGTAAAAGATTAAAGTGGCCCACAGACAAACAGGATCCTGC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCTCAGTAAAAGATTAAAGTGGCCCACAGACAAACAGGATCCTGC  1027

seq1  AACTACAGTTCCCAGAGAGCCAGGGGAATATTCTAACGAACCTTGGGGCA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGTTCCCAGAGAGCCAGGGGAATATTCTAACGAACCTTGGGGCA  1077

seq1  GGGCAATTTGGGCAGCCAATGAGCTCTTCCTCTGCAGAGCTCGGCCTCCT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATTTGGGCAGCCAATGAGCTCTTCCTCTGCAGAGCTCGGCCTCCT  1127

seq1  ACCAGCTTCCAGGTCACAGGCCCTGCTACACGGGAGGCATAGCTTGCTGG  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTTCCAGGTCACAGGCCCTGCTACACGGGAGGCATAGCTTGCTGG  1177

seq1  CTGCCAGACCGATTTGCAGTGTGCTTCGAAACCCTGTTTCACAGGAAGAT  1242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGACCGATTTGCAGTGTGCTTCGAAACCCTGTTTCACAGGAAGAT  1227

seq1  CAGGAAGCAGAATTC  1257
      |||||||||||||||
seq2  CAGGAAGCAGAATTC  1242

seq1: chr8_69837730_69838816
seq2: B6Ng01-077L10.g_69_1145

seq1  GAATTCTCTCCCTTGACATCCTTAACAATGGCTTGTGAGCTGTAATGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCCTTGACATCCTTAACAATGGCTTGTGAGCTGTAATGTTT  50

seq1  CGGATTGGGTTATATATTACAGTGAAAATATTAGGCAAGGCACACATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATTGGGTTATATATTACAGTGAAAATATTAGGCAAGGCACACATGAA  100

seq1  CATCAATTTTGGAAAATATAGCCTCTGTTCTTTCACTTGGAGCCTGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATTTTGGAAAATATAGCCTCTGTTCTTTCACTTGGAGCCTGTGCT  150

seq1  TTCATTTCATTTACTTTCTGATAGTTAAAGTTTTGAAGGCATATTTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCATTTACTTTCTGATAGTTAAAGTTTTGAAGGCATATTTGAAT  200

seq1  AGAAGTATTTAAGCAATAAAGTTCAGGGCTATTTATTTTTGCCAAGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTATTTAAGCAATAAAGTTCAGGGCTATTTATTTTTGCCAAGAACA  250

seq1  TAGTTTCTACCAATTAGTGGCTTATTTAATTATTGTGAAATTAGACAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTACCAATTAGTGGCTTATTTAATTATTGTGAAATTAGACAAGC  300

seq1  ACAATCAATGATAGGAAATAATTCTTGCCAACTCATAATACATCCCTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAATGATAGGAAATAATTCTTGCCAACTCATAATACATCCCTGCT  350

seq1  ATCTGACATTTTGGATTGTTCTAATCAATAATGAATCAATGCAACTTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACATTTTGGATTGTTCTAATCAATAATGAATCAATGCAACTTAGC  400

seq1  TCTACCACGCAAAAATCTTCACGATGTTGTGATACTAAAAATAAAACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCACGCAAAAATCTTCACGATGTTGTGATACTAAAAATAAAACCAG  450

seq1  ATGAATAATCTCCCAAATTTTAAGATTTTATTCAATAAGGTTTGTCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAATCTCCCAAATTTTAAGATTTTATTCAATAAGGTTTGTCTTCA  500

seq1  GACACTCAGGTAGTTAAGAGTGTGTATAATGGGAGCATGATCACATTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCAGGTAGTTAAGAGTGTGTATAATGGGAGCATGATCACATTTAC  550

seq1  ATTTCTTTTATAGGGCATTTCACCTCATAAAGGAAGAGGTGAATCATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTTATAGGGCATTTCACCTCATAAAGGAAGAGGTGAATCATATA  600

seq1  TGTTAGTACAAGTAAACAAATGTCACAGGACTACCTAACCACTTTCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTACAAGTAAACAAATGTCACAGGACTACCTAACCACTTTCTTAT  650

seq1  TAAAGTCTTGCTCCACAAGATGAAATTCATATCTAGTACCATTCCTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCTTGCTCCACAAGATGAAATTCATATCTAGTACCATTCCTGGGC  700

seq1  CAAATGCCTGTGGTTTGACAAGTCATGGGTTCTAGGGAGAAACCTACTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCCTGTGGTTTGACAAGTCATGGGTTCTAGGGAGAAACCTACTAC  750

seq1  TATTACTCTAAGTAGGCATGGTATTAAACCTACTCTTAATGTTTTATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTCTAAGTAGGCATGGTATTAAACCTACTCTTAATGTTTTATCTT  800

seq1  TATGCCCATAGATTAATGCATCTCTCAGCCCTCATTAGAGGAATTTCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCATAGATTAATGCATCTCTCAGCCCTCATTAGAGGAATTTCTAT  850

seq1  CTGCAGTAAATGATGATCAATAGAGACCCATAACTAGCCAGTTTGCAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTAAATGATGATCAATAGAGACCCATAACTAGCCAGTTTGCAGAG  900

seq1  ACT-AAGGAATTGCAAGAATTCTCAGCCCTAAGTAGAACATTCATATTGT  949
      ||| |||||||||||   ||||||||||||||||||||||||||||||||
seq2  ACTAAAGGAATTGCA--GATTCTCAGCCCTAAGTAGAACATTCATATTGT  948

seq1  GTTCCCTCATTCCAAGGCTCAGGGACCACTGTAAGAGTATAAGAGTCAGA  999
      ||||||||||||| ||||||| |||||||||| |||||||||||||||||
seq2  GTTCCCTCATTCC-AGGCTCA-GGACCACTGT-AGAGTATAAGAGTCAGA  995

seq1  CATAGTGGATGATTGCAAGGAAAAGAGATGTTG-CACATGTGAACTCATC  1048
      || ||||||||||||||  | |||||||||||| |||||||| |||||||
seq2  CA-AGTGGATGATTGCA--GGAAAGAGATGTTGCCACATGTG-ACTCATC  1041

seq1  GAGGCTGTGATAGCATGGACAAGATCTGTGCAAGGTCAA  1087
      || |||||||||||||||||||||||||||||  |||||
seq2  GA-GCTGTGATAGCATGGACAAGATCTGTGCA--GTCAA  1077